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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914454
Clone id YMU001_000059_B02
Library
Length 618
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000059_B02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTGGAAGGTAGTTCCCTGTTCATTTGGACTAACATTTGAACGCTCAAAGGTAGCTGGCTG
AACTAGTATAGCCTGAGGAATTGGCATCCTAGCCACCTATTCATAGACAAAAAAAGTTTT
CCTTGGAGCCTCCGCAACATGCGAATGCTCCCTGCCCTGTTGGGACACATTAGGGACCTG
CGCTTGAGCTTGTTCCTTAGCTTGTTGTGACACTAGAGGAGGTTGTAAAACCTCCATAAA
CATGGGATTTTGCATTAATGATTGAACATAGTCACAACCATGATAAGCATGAACCTGAAC
ACATCTTCTCCTTGTTGGCCAATCCCTACTATTTGATCCCGCGATGCATTCACATCAGTG
TAGGGTTATAGGTAGTGGTGGCTGTGAACTTTCGGCAACCTCACGCACTTTAGGAATAGC
CTATCTAAGTTGTAAAGAAGAGCCCTCTTCTCTAGTGTCATCTATCTTGTTAGCAATAGA
GGAACTCCAAGTATACTTTGTGTCTTGGCCCAAAACAGATCAAGGCTCACTTCTTGAGGA
AAAAGTGATGCATCCCAGGAATGGAACCATTAAACCGGCCTATAGACTTACTGAAGGACG
GTAATACTTTAGCTTGAG
■■Homology search results ■■ -
sp_hit_id Q55B06
Definition sp|Q55B06|SPXS1_DICDI SPX and EXS domain-containing protein 1 OS=Dictyostelium discoideum
Align length 68
Score (bit) 32.0
E-value 2.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914454|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_B02.
         (618 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q55B06|SPXS1_DICDI SPX and EXS domain-containing protein 1 OS...    32   2.6  
sp|P82772|LCR58_ARATH Putative low-molecular-weight cysteine-ric...    31   5.8  

>sp|Q55B06|SPXS1_DICDI SPX and EXS domain-containing protein 1
           OS=Dictyostelium discoideum GN=DDB_G0271664 PE=4 SV=2
          Length = 923

 Score = 32.0 bits (71), Expect = 2.6
 Identities = 22/68 (32%), Positives = 29/68 (42%)
 Frame = -1

Query: 333 NSRDWPTRRRCVQVHAYHGCDYVQSLMQNPMFMEVLQPPLVSQQAKEQAQAQVPNVSQQG 154
           NS D       +Q  + H     Q   Q P      QPP   QQA++QAQ Q P   QQ 
Sbjct: 82  NSLDSSIGSNIIQEQSQHQ----QQAQQQPPQQAQQQPP---QQAQQQAQQQAPQAQQQA 134

Query: 153 REHSHVAE 130
           ++ +   E
Sbjct: 135 QQQAQQPE 142


>sp|P82772|LCR58_ARATH Putative low-molecular-weight cysteine-rich
           protein LCR58 OS=Arabidopsis thaliana GN=LCR58 PE=3 SV=1
          Length = 127

 Score = 30.8 bits (68), Expect = 5.8
 Identities = 17/51 (33%), Positives = 20/51 (39%), Gaps = 7/51 (13%)
 Frame = +2

Query: 122 LGASATCECSLP-------CWDTLGTCA*ACSLACCDTRGGCKTSINMGFC 253
           L  + T EC  P       C    G C+  C   CCDT    K +   GFC
Sbjct: 62  LSCTCTYECGPPLPPKGNVCSGGTGMCSGKCPYKCCDTSCAQKYNGGRGFC 112
tr_hit_id B7AFK8
Definition tr|B7AFK8|B7AFK8_9BACE Putative uncharacterized protein OS=Bacteroides eggerthii DSM 20697
Align length 40
Score (bit) 35.8
E-value 2.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914454|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_B02.
         (618 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7AFK8|B7AFK8_9BACE Putative uncharacterized protein OS=Bacte...    36   2.1  
tr|B3CCK9|B3CCK9_9BACE Putative uncharacterized protein OS=Bacte...    35   2.7  
tr|A8JG01|A8JG01_CHLRE RWP-RK transcription factor OS=Chlamydomo...    35   4.7  
tr|B5CX19|B5CX19_9BACE Putative uncharacterized protein OS=Bacte...    34   6.1  
tr|B3JGE9|B3JGE9_9BACE Putative uncharacterized protein OS=Bacte...    34   6.1  

>tr|B7AFK8|B7AFK8_9BACE Putative uncharacterized protein
           OS=Bacteroides eggerthii DSM 20697 GN=BACEGG_01139 PE=4
           SV=1
          Length = 330

 Score = 35.8 bits (81), Expect = 2.1
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = -1

Query: 249 NPMFMEVLQPPLVSQQAKEQAQAQVPNVSQQGREHSHVAE 130
           NP FM+  +  L+ +QA+EQA AQ    +++  EH  +AE
Sbjct: 85  NPEFMDAFEAALLVRQAEEQATAQAIAAAKEKAEHDRIAE 124


>tr|B3CCK9|B3CCK9_9BACE Putative uncharacterized protein
           OS=Bacteroides intestinalis DSM 17393 GN=BACINT_02139
           PE=4 SV=1
          Length = 330

 Score = 35.4 bits (80), Expect = 2.7
 Identities = 16/40 (40%), Positives = 25/40 (62%)
 Frame = -1

Query: 249 NPMFMEVLQPPLVSQQAKEQAQAQVPNVSQQGREHSHVAE 130
           NP FM+  +  L+ +QA+EQA AQ    +++  EH  +AE
Sbjct: 85  NPEFMDAFEVALLVRQAEEQATAQAIAAAKEKAEHDRIAE 124


>tr|A8JG01|A8JG01_CHLRE RWP-RK transcription factor OS=Chlamydomonas
            reinhardtii GN=RWP12 PE=4 SV=1
          Length = 2146

 Score = 34.7 bits (78), Expect = 4.7
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = -1

Query: 249  NPMFMEVLQPPLVSQQAKEQAQAQVPNVSQQGREHSHVAEAPRKTFFVYE*VARMPI 79
            +P   + L PP+  QQ ++Q Q Q  N  QQ   H H   +P    +     A  P+
Sbjct: 940  HPTLQQQLYPPMYQQQTQQQPQPQQQNAGQQPAYHHHPLLSPHSPQYQQRMQASAPV 996


>tr|B5CX19|B5CX19_9BACE Putative uncharacterized protein
           OS=Bacteroides plebeius DSM 17135 GN=BACPLE_01259 PE=4
           SV=1
          Length = 330

 Score = 34.3 bits (77), Expect = 6.1
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -1

Query: 249 NPMFMEVLQPPLVSQQAKEQAQAQVPNVSQQGREHSHVAE 130
           NP FM+  +  L+  QA+EQA AQ    +++  EH  +AE
Sbjct: 85  NPEFMDAFEVALLVGQAEEQATAQAIAAAKEKAEHDRIAE 124


>tr|B3JGE9|B3JGE9_9BACE Putative uncharacterized protein
           OS=Bacteroides coprocola DSM 17136 GN=BACCOP_00951 PE=4
           SV=1
          Length = 330

 Score = 34.3 bits (77), Expect = 6.1
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -1

Query: 249 NPMFMEVLQPPLVSQQAKEQAQAQVPNVSQQGREHSHVAE 130
           NP FM+  +  L+  QA+EQA AQ    +++  EH  +AE
Sbjct: 85  NPEFMDAFEVALLVGQAEEQATAQAIAAAKEKAEHDRIAE 124