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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914459
Clone id YMU001_000059_B07
Library
Length 276
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000059_B07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GGTATTCAACGATTTGCACTCTTGAATCAATTCATCCTCATCCAAAAGCTCTTCAAGTGT
AAACCCATCTCTGTCAAGCAACGACTCCACAGGGGAGGTCGTTGACAGCCCTGCCATACG
CCAAAACATCTTTCTGAGGTAGGATTGCACAGAAGAAATCGCCCTTGGAGTTGCAGCTGC
GGAATTCTGCAAATCTCTCGATGCCAAGCTGAAGTGTGAGGCCGTGATGCAGCTTTATGG
ATCCAATCCAATGGTCAACCCAACGCTTGCACTTCC
■■Homology search results ■■ -
sp_hit_id Q8R3Q2
Definition sp|Q8R3Q2|SAPS2_MOUSE Serine/threonine-protein phosphatase 6 regulatory subunit 2 OS=Mus musculus
Align length 42
Score (bit) 33.5
E-value 0.34
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914459|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_B07.
         (276 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8R3Q2|SAPS2_MOUSE Serine/threonine-protein phosphatase 6 reg...    33   0.34 
sp|O75170|SAPS2_HUMAN Serine/threonine-protein phosphatase 6 reg...    33   0.34 
sp|Q6NRF1|SAP3B_XENLA Serine/threonine-protein phosphatase 6 reg...    31   2.2  
sp|Q6NRI0|SAP3A_XENLA Serine/threonine-protein phosphatase 6 reg...    31   2.2  
sp|Q8C031|NGL1_MOUSE Netrin-G1 ligand OS=Mus musculus GN=Lrrc4c ...    30   3.7  
sp|Q9HCJ2|NGL1_HUMAN Netrin-G1 ligand OS=Homo sapiens GN=LRRC4C ...    30   3.7  
sp|Q922D4|SAPS3_MOUSE Serine/threonine-protein phosphatase 6 reg...    30   4.9  
sp|Q5H9R7|SAPS3_HUMAN Serine/threonine-protein phosphatase 6 reg...    30   4.9  
sp|Q5F471|SAPS3_CHICK Serine/threonine-protein phosphatase 6 reg...    30   4.9  
sp|Q9UPN7|SAPS1_HUMAN Serine/threonine-protein phosphatase 6 reg...    29   6.4  
sp|Q643R3|PLCG_HUMAN 1-acyl-sn-glycerol-3-phosphate acyltransfer...    29   6.4  
sp|Q5SPL2|PHF12_MOUSE PHD finger protein 12 OS=Mus musculus GN=P...    29   8.4  
sp|Q96QT6|PHF12_HUMAN PHD finger protein 12 OS=Homo sapiens GN=P...    29   8.4  

>sp|Q8R3Q2|SAPS2_MOUSE Serine/threonine-protein phosphatase 6
           regulatory subunit 2 OS=Mus musculus GN=Saps2 PE=1 SV=1
          Length = 923

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = -1

Query: 129 MFWRMAGLSTTSPVESLLDRDGFTXXXXXXXXXLIQECKSLN 4
           MFW+   L+TTS V+ LLD++  T         ++QECK+ N
Sbjct: 1   MFWKF-DLNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQN 41


>sp|O75170|SAPS2_HUMAN Serine/threonine-protein phosphatase 6
           regulatory subunit 2 OS=Homo sapiens GN=SAPS2 PE=1 SV=2
          Length = 966

 Score = 33.5 bits (75), Expect = 0.34
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = -1

Query: 129 MFWRMAGLSTTSPVESLLDRDGFTXXXXXXXXXLIQECKSLN 4
           MFW+   L+TTS V+ LLD++  T         ++QECK+ N
Sbjct: 1   MFWKF-DLNTTSHVDKLLDKEHVTLQELMDEDDILQECKAQN 41


>sp|Q6NRF1|SAP3B_XENLA Serine/threonine-protein phosphatase 6
           regulatory subunit 3-B OS=Xenopus laevis GN=saps3-B PE=2
           SV=1
          Length = 850

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -1

Query: 129 MFWRMAGLSTTSPVESLLDRDGFTXXXXXXXXXLIQECKSLN 4
           MFW+   L ++S +++LL+RD  T         ++QECK+ N
Sbjct: 1   MFWKF-DLHSSSHIDTLLERDEVTLKELMDEEDILQECKAQN 41


>sp|Q6NRI0|SAP3A_XENLA Serine/threonine-protein phosphatase 6
           regulatory subunit 3-A OS=Xenopus laevis GN=saps3-A PE=2
           SV=1
          Length = 852

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 15/42 (35%), Positives = 25/42 (59%)
 Frame = -1

Query: 129 MFWRMAGLSTTSPVESLLDRDGFTXXXXXXXXXLIQECKSLN 4
           MFW+   L ++S +++LL+RD  T         ++QECK+ N
Sbjct: 1   MFWKF-DLHSSSHIDTLLERDEVTLKELMDEEDILQECKAQN 41


>sp|Q8C031|NGL1_MOUSE Netrin-G1 ligand OS=Mus musculus GN=Lrrc4c
           PE=1 SV=2
          Length = 640

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +1

Query: 127 HLSEVGLHRRNRPWSCSCGILQISRCQAEV*GRDAALWIQSNGQPN 264
           HL  + LH  + PW+C+C IL +S    ++   + A   + N  PN
Sbjct: 292 HLERIHLH--HNPWNCNCDILWLSWWIRDMAPSNTACCARCNTPPN 335


>sp|Q9HCJ2|NGL1_HUMAN Netrin-G1 ligand OS=Homo sapiens GN=LRRC4C
           PE=1 SV=1
          Length = 640

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +1

Query: 127 HLSEVGLHRRNRPWSCSCGILQISRCQAEV*GRDAALWIQSNGQPN 264
           HL  + LH  + PW+C+C IL +S    ++   + A   + N  PN
Sbjct: 292 HLERIHLH--HNPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPN 335


>sp|Q922D4|SAPS3_MOUSE Serine/threonine-protein phosphatase 6
           regulatory subunit 3 OS=Mus musculus GN=Saps3 PE=1 SV=1
          Length = 844

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = -1

Query: 129 MFWRMAGLSTTSPVESLLDRDGFTXXXXXXXXXLIQECKSLN 4
           MFW+   L ++S +++LL+R+  T         ++QECK+ N
Sbjct: 1   MFWKF-DLHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQN 41


>sp|Q5H9R7|SAPS3_HUMAN Serine/threonine-protein phosphatase 6
           regulatory subunit 3 OS=Homo sapiens GN=SAPS3 PE=1 SV=2
          Length = 873

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = -1

Query: 129 MFWRMAGLSTTSPVESLLDRDGFTXXXXXXXXXLIQECKSLN 4
           MFW+   L ++S +++LL+R+  T         ++QECK+ N
Sbjct: 1   MFWKF-DLHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQN 41


>sp|Q5F471|SAPS3_CHICK Serine/threonine-protein phosphatase 6
           regulatory subunit 3 OS=Gallus gallus GN=SAPS3 PE=2 SV=1
          Length = 873

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = -1

Query: 129 MFWRMAGLSTTSPVESLLDRDGFTXXXXXXXXXLIQECKSLN 4
           MFW+   L ++S +++LL+R+  T         ++QECK+ N
Sbjct: 1   MFWKF-DLHSSSHIDTLLEREDVTLKELMDEEDVLQECKAQN 41


>sp|Q9UPN7|SAPS1_HUMAN Serine/threonine-protein phosphatase 6
           regulatory subunit 1 OS=Homo sapiens GN=SAPS1 PE=1 SV=4
          Length = 943

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 14/42 (33%), Positives = 25/42 (59%)
 Frame = -1

Query: 129 MFWRMAGLSTTSPVESLLDRDGFTXXXXXXXXXLIQECKSLN 4
           MFW+   L T+S +++LL+R+  +         ++QECK +N
Sbjct: 63  MFWKF-DLHTSSHLDTLLEREDLSLPELLDEEDVLQECKVVN 103
tr_hit_id A7Q1D7
Definition tr|A7Q1D7|A7Q1D7_VITVI Chromosome chr10 scaffold_43, whole genome shotgun sequence OS=Vitis vinifera
Align length 42
Score (bit) 55.5
E-value 1.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914459|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_B07.
         (276 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7Q1D7|A7Q1D7_VITVI Chromosome chr10 scaffold_43, whole genom...    55   1e-06
tr|A9T9F9|A9T9F9_PHYPA Predicted protein (Fragment) OS=Physcomit...    55   2e-06
tr|A9PFF6|A9PFF6_POPTR Putative uncharacterized protein OS=Popul...    55   2e-06
tr|A9SSD5|A9SSD5_PHYPA Predicted protein OS=Physcomitrella paten...    54   3e-06
tr|Q9S9Q4|Q9S9Q4_ARATH F26G16.7 protein OS=Arabidopsis thaliana ...    54   4e-06
tr|Q6L4R9|Q6L4R9_ORYSJ Os05g0592500 protein OS=Oryza sativa subs...    53   9e-06
tr|B8AAT1|B8AAT1_ORYSI Putative uncharacterized protein OS=Oryza...    53   9e-06
tr|A7NZK1|A7NZK1_VITVI Chromosome chr6 scaffold_3, whole genome ...    51   3e-05
tr|A9TZV1|A9TZV1_PHYPA Predicted protein (Fragment) OS=Physcomit...    48   2e-04
tr|Q8L7T5|Q8L7T5_ARATH At1g07990/T6D22_5 OS=Arabidopsis thaliana...    47   5e-04
tr|Q0WNK4|Q0WNK4_ARATH Putative uncharacterized protein At1g0799...    47   5e-04
tr|Q7XTT5|Q7XTT5_ORYSJ OSJNBa0058K23.19 protein OS=Oryza sativa ...    46   0.001
tr|Q0JA17|Q0JA17_ORYSJ Os04g0620400 protein (Fragment) OS=Oryza ...    46   0.001
tr|Q01JU5|Q01JU5_ORYSA H0714H04.7 protein OS=Oryza sativa GN=H07...    46   0.001
tr|Q55FM2|Q55FM2_DICDI Putative uncharacterized protein OS=Dicty...    39   0.17 
tr|B6HQ61|B6HQ61_PENCH Pc22g06740 protein OS=Penicillium chrysog...    36   0.85 
tr|A8NDT0|A8NDT0_COPC7 Putative uncharacterized protein OS=Copri...    36   0.85 
tr|Q5B1E9|Q5B1E9_EMENI Putative uncharacterized protein OS=Emeri...    36   1.1  
tr|Q5RGI5|Q5RGI5_DANRE Novel protein similar to human chromosome...    35   1.5  
tr|A4R703|A4R703_MAGGR Putative uncharacterized protein OS=Magna...    35   1.5  
tr|Q4P9B2|Q4P9B2_USTMA Putative uncharacterized protein OS=Ustil...    35   1.9  
tr|Q7S0I8|Q7S0I8_NEUCR Putative uncharacterized protein OS=Neuro...    34   3.2  
tr|A4HDB8|A4HDB8_LEIBR Putative uncharacterized protein OS=Leish...    34   3.2  
tr|A4IIT0|A4IIT0_XENTR LOC100125053 protein (Fragment) OS=Xenopu...    34   4.2  
tr|Q2HBJ9|Q2HBJ9_CHAGB Putative uncharacterized protein OS=Chaet...    34   4.2  
tr|B0DQ54|B0DQ54_LACBS Predicted protein OS=Laccaria bicolor (st...    34   4.2  
tr|A2QJ34|A2QJ34_ASPNC Complex: S. cerevisae SAP190 physically a...    34   4.2  
tr|Q6GNW5|Q6GNW5_XENLA MGC80827 protein OS=Xenopus laevis GN=sap...    33   5.5  
tr|Q8C400|Q8C400_MOUSE Putative uncharacterized protein OS=Mus m...    33   5.5  
tr|Q8C3X1|Q8C3X1_MOUSE Putative uncharacterized protein OS=Mus m...    33   5.5  

>tr|A7Q1D7|A7Q1D7_VITVI Chromosome chr10 scaffold_43, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00028415001
           PE=4 SV=1
          Length = 790

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 25/42 (59%), Positives = 31/42 (73%)
 Frame = -1

Query: 129 MFWRMAGLSTTSPVESLLDRDGFTXXXXXXXXXLIQECKSLN 4
           MFWRMAGLST SPVE++LD++ FT         +IQECK+LN
Sbjct: 1   MFWRMAGLSTASPVETILDKENFTLEELLDEDEIIQECKALN 42


>tr|A9T9F9|A9T9F9_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_192861 PE=4 SV=1
          Length = 593

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 24/43 (55%), Positives = 33/43 (76%)
 Frame = -1

Query: 129 MFWRMAGLSTTSPVESLLDRDGFTXXXXXXXXXLIQECKSLNT 1
           MFWR++GLSTTSPVE++LD+D +T         +IQECK+LN+
Sbjct: 1   MFWRISGLSTTSPVEAVLDKDAYTLEELLDEDEIIQECKALNS 43


>tr|A9PFF6|A9PFF6_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 840

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 25/43 (58%), Positives = 31/43 (72%)
 Frame = -1

Query: 129 MFWRMAGLSTTSPVESLLDRDGFTXXXXXXXXXLIQECKSLNT 1
           MFW++  LST+SPVESLLD+D FT         +IQECK+LNT
Sbjct: 1   MFWKLTALSTSSPVESLLDKDNFTLEELLDEEEIIQECKALNT 43


>tr|A9SSD5|A9SSD5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_134420 PE=4 SV=1
          Length = 736

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 25/43 (58%), Positives = 32/43 (74%)
 Frame = -1

Query: 129 MFWRMAGLSTTSPVESLLDRDGFTXXXXXXXXXLIQECKSLNT 1
           MFWR+ GLSTTSPVES+LD+D +T         +IQECK+LN+
Sbjct: 1   MFWRVPGLSTTSPVESVLDKDVYTLEELLDEDEIIQECKALNS 43


>tr|Q9S9Q4|Q9S9Q4_ARATH F26G16.7 protein OS=Arabidopsis thaliana
           GN=F26G16.7 PE=4 SV=1
          Length = 783

 Score = 53.9 bits (128), Expect = 4e-06
 Identities = 25/42 (59%), Positives = 30/42 (71%)
 Frame = -1

Query: 129 MFWRMAGLSTTSPVESLLDRDGFTXXXXXXXXXLIQECKSLN 4
           MFWRMAGLST S VE++LD+D FT         +IQECK+LN
Sbjct: 1   MFWRMAGLSTASAVEAILDKDSFTLEDLLDEDEIIQECKALN 42


>tr|Q6L4R9|Q6L4R9_ORYSJ Os05g0592500 protein OS=Oryza sativa subsp.
           japonica GN=P0663C08.9 PE=2 SV=1
          Length = 770

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 23/43 (53%), Positives = 30/43 (69%)
 Frame = -1

Query: 129 MFWRMAGLSTTSPVESLLDRDGFTXXXXXXXXXLIQECKSLNT 1
           MFWRM GLS  SPV+++LD++ FT         +IQECK+LNT
Sbjct: 1   MFWRMTGLSAASPVDTILDKENFTLEELLDEDEIIQECKALNT 43


>tr|B8AAT1|B8AAT1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_02602 PE=4 SV=1
          Length = 772

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 23/43 (53%), Positives = 30/43 (69%)
 Frame = -1

Query: 129 MFWRMAGLSTTSPVESLLDRDGFTXXXXXXXXXLIQECKSLNT 1
           MFWRM GLS  SPV+++LD++ FT         +IQECK+LNT
Sbjct: 1   MFWRMTGLSAASPVDTILDKENFTLEELLDEDEIIQECKALNT 43


>tr|A7NZK1|A7NZK1_VITVI Chromosome chr6 scaffold_3, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00024545001
           PE=4 SV=1
          Length = 810

 Score = 50.8 bits (120), Expect = 3e-05
 Identities = 22/43 (51%), Positives = 31/43 (72%)
 Frame = -1

Query: 129 MFWRMAGLSTTSPVESLLDRDGFTXXXXXXXXXLIQECKSLNT 1
           MFW++  LST+SPVES+LD++ FT         +IQECK+LN+
Sbjct: 1   MFWKLTALSTSSPVESVLDKENFTLEELLDEEEIIQECKALNS 43


>tr|A9TZV1|A9TZV1_PHYPA Predicted protein (Fragment)
           OS=Physcomitrella patens subsp. patens
           GN=PHYPADRAFT_30285 PE=4 SV=1
          Length = 596

 Score = 48.1 bits (113), Expect = 2e-04
 Identities = 24/45 (53%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
 Frame = -1

Query: 129 MFWRMAGLSTTSP--VESLLDRDGFTXXXXXXXXXLIQECKSLNT 1
           MFWR+ GLSTTSP  V+S+LD+D +T         +IQECK+LN+
Sbjct: 1   MFWRVPGLSTTSPEFVDSVLDKDVYTLEELLDEDEIIQECKALNS 45


>tr|Q8L7T5|Q8L7T5_ARATH At1g07990/T6D22_5 OS=Arabidopsis thaliana
           GN=At1g07990 PE=2 SV=1
          Length = 802

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 20/43 (46%), Positives = 29/43 (67%)
 Frame = -1

Query: 129 MFWRMAGLSTTSPVESLLDRDGFTXXXXXXXXXLIQECKSLNT 1
           MFW++  LS +SPVE +LD++ FT         +IQECK+LN+
Sbjct: 1   MFWKLTSLSASSPVEIILDKENFTLEELLDEEEIIQECKALNS 43