BP914460 |
Clone id |
YMU001_000059_B08 |
Library |
YMU01 |
Length |
541 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000059_B08. |
Accession |
BP914460 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ACGTGGACAGAAAGTCATTGCTTGCTGGGTGTCTCAACTTGAATTTCCAATACATCAATG CCCTATCAAAGATGTTCGTGGGTGTCAAGCAGACCCTATTCTTCAAGTTCATCAGCTCCA TACAAGCTATATAGCTCTACGCCGGTATTGACATCAGCACTACTTTTTGAAAATACGATT CATCCTAGTCTTTCAAACAATATCCTACCATGCCTTTGAATGTGTGCATCTTGTGTTGTT TCAACCCACGACACAAAACCATTCCCCCTGCGAGGCGTCGACTTAGCCCAACCCAAGTAT GCTTTTATTTTCTTCTTGTTCACAACAATCAATGATGTTGCCCAAAGCCAGACAACCATT TGCAAATGAAGATGCAAAAGCGCTCCTCCTCTTTCCAATGCGCACAAGCCATCTAGCGTC TCCCTTTCAAGAAACAACTTCATGCAGCCCAGCAGGCCTATCTCTACATCATCAGCACCC CTGAGACATAGTAACACTAACTTCCATCACTCTGGCCTCTGGCTTCCTTGCTTTTGATGA G |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q1QY40 |
Definition |
sp|Q1QY40|ACCD_CHRSD Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) |
Align length |
50 |
Score (bit) |
30.4 |
E-value |
5.7 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A4Q7L0 |
Definition |
tr|A4Q7L0|A4Q7L0_MEDTR BSD OS=Medicago truncatula |
Align length |
72 |
Score (bit) |
34.7 |
E-value |
3.3 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914460|Adiantum capillus-veneris mRNA, clone: YMU001_000059_B08. (541 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A4Q7L0|A4Q7L0_MEDTR BSD OS=Medicago truncatula GN=MtrDRAFT_AC... 35 3.3 tr|B5YMD1|B5YMD1_THAPS Predicted protein OS=Thalassiosira pseudo... 34 5.7 tr|B0DHE3|B0DHE3_LACBS Predicted protein OS=Laccaria bicolor (st... 34 5.7 tr|A2QE11|A2QE11_ASPNC Remark: S. cerevisiae cells expressing Tp... 34 5.7 tr|A2FU95|A2FU95_TRIVA Putative uncharacterized protein OS=Trich... 33 7.4 tr|Q9W692|Q9W692_ACITR Proorphanin OS=Acipenser transmontanus PE... 33 9.5 tr|B3SP85|B3SP85_PIG Gamma-interferon-inducible-lysosomal thiol ... 33 9.5 tr|A6QPN6|A6QPN6_BOVIN IFI30 protein OS=Bos taurus GN=IFI30 PE=2... 33 9.5 tr|B6KHY9|B6KHY9_TOXGO Putative uncharacterized protein OS=Toxop... 33 9.7
>tr|A4Q7L0|A4Q7L0_MEDTR BSD OS=Medicago truncatula GN=MtrDRAFT_AC182813g12v2 PE=4 SV=1 Length = 388
Score = 34.7 bits (78), Expect = 3.3 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%) Frame = +2
Query: 23 CWVSQLEFPIHQCPIKDVRGCQADPILQVHQLHTSYIALRR----Y*HQHYFLKIRFILV 190 CW ++ FP+H + Q + L + QL ++ LR Y + F I F+L+ Sbjct: 147 CW-TEFPFPLHNADCS-LSNSQREHALAIEQLVPEFVTLRMNLCSYMNVEKFWMIYFLLI 204
Query: 191 FQTISYHAFECV 226 ++ H FEC+ Sbjct: 205 LPRLNQHDFECL 216
>tr|B5YMD1|B5YMD1_THAPS Predicted protein OS=Thalassiosira pseudonana CCMP1335 GN=THAPS_23374 PE=4 SV=1 Length = 353
Score = 33.9 bits (76), Expect = 5.7 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 4/57 (7%) Frame = +1
Query: 334 DVAQSQTTICK*RCKSAPPLSNAHKPSSVSLSRNNFMQ---PSRPISTSSAPL-RHS 492 ++ +S T R SAPP++ H S LSR++F PS ++T++ P+ RH+ Sbjct: 278 NIGRSSTAGVNTRSNSAPPINPVHNTSGNGLSRHSFSSAALPSSSLNTNATPITRHT 334
>tr|B0DHE3|B0DHE3_LACBS Predicted protein OS=Laccaria bicolor (strain S238N-H82) GN=LACBIDRAFT_329213 PE=4 SV=1 Length = 2266
Score = 33.9 bits (76), Expect = 5.7 Identities = 16/40 (40%), Positives = 23/40 (57%) Frame = +1
Query: 382 APPLSNAHKPSSVSLSRNNFMQPSRPISTSSAPLRHSNTN 501 APP KP S+S+S + RP + S+AP R ++TN Sbjct: 1956 APPPVTVTKPGSLSMSNPEQLSRERPKAASAAPTRRTDTN 1995
>tr|A2QE11|A2QE11_ASPNC Remark: S. cerevisiae cells expressing Tpo1 become resistant to polyamine toxicity OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=An02g08970 PE=4 SV=1 Length = 646
Score = 33.9 bits (76), Expect = 5.7 Identities = 27/118 (22%), Positives = 51/118 (43%), Gaps = 5/118 (4%) Frame = +1
Query: 151 TSALLFENTIHPSLSNNILPCL*MCASCV--VSTHDTKPFPLRGVDLAQPKYAFIFFLFT 324 ++A + P + I+ L +C+S + + + T+PF + P + F+F+ Sbjct: 457 STATAYAMECFPGVGGEIVVILAICSSIINFIISETTQPF----YEATGPGWLFLFYGIC 512
Query: 325 TINDVAQSQTTIC---K*RCKSAPPLSNAHKPSSVSLSRNNFMQPSRPISTSSAPLRH 489 I +A K R KS+PP ++ P ++ PS+P +S +P H Sbjct: 513 VIISLAAGMAVYIWGKKWRRKSSPPTHPSNSPPLPQPPPSSPSPPSKPTQSSPSPPPH 570
>tr|A2FU95|A2FU95_TRIVA Putative uncharacterized protein OS=Trichomonas vaginalis G3 GN=TVAG_472680 PE=4 SV=1 Length = 195
Score = 33.5 bits (75), Expect = 7.4 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 1/82 (1%) Frame = +2
Query: 206 YHAFECVHLVLFQPTTQNHSPCEAST*PNPSMLLFS-SCSQQSMMLPKARQPFANEDAKA 382 Y+AF +++ + +QN + AS PN M LFS C +Q + + ++DA Sbjct: 84 YNAFHEMYINVRNDESQNKNVVFASKVPNDRMSLFSIECKEQGNLHQRDEFFLKSDDANC 143
Query: 383 LLLFPMRTSHLASPFQETTSCS 448 L H P+ +CS Sbjct: 144 YLYTTFNAEHPEMPYAFLVNCS 165
>tr|Q9W692|Q9W692_ACITR Proorphanin OS=Acipenser transmontanus PE=2 SV=2 Length = 194
Score = 33.1 bits (74), Expect = 9.5 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%) Frame = -3
Query: 506 WKLVLLCL--RGADDVEIGLLGCMKLFLERETLDGL-CALERGG 384 W L+LLCL G D ++ L C + + +T + L C +ERGG Sbjct: 6 WTLLLLCLCVPGRSDCQMDCLSCSQRLFQHDTFNTLVCIVERGG 49
>tr|B3SP85|B3SP85_PIG Gamma-interferon-inducible-lysosomal thiol reductase OS=Sus scrofa PE=2 SV=1 Length = 246
Score = 33.1 bits (74), Expect = 9.5 Identities = 16/51 (31%), Positives = 32/51 (62%), Gaps = 3/51 (5%) Frame = -3
Query: 500 LVLLCLRGADDVEIGLLGCMKLFLERETLDGL--CAL-ERGGALLHLHLQM 357 L ++C+ DD+E L C++++ + + D + CA+ +RG LLH++ Q+ Sbjct: 140 LTIVCIEELDDMEKNLEPCLQIYAPKVSPDSIMECAMGDRGMQLLHINAQL 190
>tr|A6QPN6|A6QPN6_BOVIN IFI30 protein OS=Bos taurus GN=IFI30 PE=2 SV=1 Length = 244
Score = 33.1 bits (74), Expect = 9.5 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 3/51 (5%) Frame = -3
Query: 500 LVLLCLRGADDVEIGLLGCMKLFLERETLDGL--CAL-ERGGALLHLHLQM 357 L ++CL DD+E L C++++ + + D + CA RG LLH++ Q+ Sbjct: 138 LTIVCLEEMDDMEQNLKPCLQIYAPKVSADSIMECATGNRGMQLLHINAQL 188
>tr|B6KHY9|B6KHY9_TOXGO Putative uncharacterized protein OS=Toxoplasma gondii ME49 GN=TGME49_003520 PE=4 SV=1 Length = 2079
Score = 33.1 bits (74), Expect = 9.7 Identities = 29/104 (27%), Positives = 42/104 (40%) Frame = +1
Query: 184 PSLSNNILPCL*MCASCVVSTHDTKPFPLRGVDLAQPKYAFIFFLFTTINDVAQSQTTIC 363 P LS +LPC S S+ + PFP R + F+F +T + + +T C Sbjct: 35 PRLSPLVLPC-----SSESSSEWSAPFPRRHSKMP----TFVFSKNSTSSFLTSLKTRAC 85
Query: 364 K*RCKSAPPLSNAHKPSSVSLSRNNFMQPSRPISTSSAPLRHSN 495 K SAPP+ N SS + P +S P H + Sbjct: 86 KTYSPSAPPVGNLADTSSQTNDGAVSSSPPAGLSHCCTPAVHQS 129
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