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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914471
Clone id YMU001_000059_C08
Library
Length 605
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000059_C08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ATCGTGTCGGCCATATTATTTTTACACTTGCTATGGGGCCAAACCGTCCAAAAGTTCGCA
GTAGAAAGTTCTCATCAACCTGAGGTGCTAGGTTGCCAACATATAAATTTGTGGTCTGAG
GATCTCCATCATCAAACGATCCTGGCAGTTTCCCATCGAGATCTTCTGGCAACTCATCAA
ATCGAGTGGGAGGACTTAAATTTCCTTTTTGCCTGCTTTCACGGCTTCGATATTCTCGAT
CCAGGCTCCTTTTTTCTCTCATCTCTTGTTCCATCTTCAATTCTTCCATGAAGTGATCAA
TGTTACGTGATTTCGTTCGATCTCTTTCTTTGCGCTTCTCCTCCTCTTTCTTTCTCTCAG
GTTCCTTGGCACTGTTAACAACTGCAGCCAATCCAGGGGGGATGAAAGAAGGAACATACC
TGCTCCCAGGCTTCTTAGAGCCAGAAGAATCTTCTTTGGATCCAGCCCCTTCAGCTTTTG
ATCGTTCATTTGCACTTGCACGTTCTTTCAAATGGCTATCGTCGCGACTATCAGGGGTTG
ATCATTCCTCCCCGCACAAAAAGCCTTCGCTCCAGGCCCATCTTCGGCCTTGAATGACTC
TACAA
■■Homology search results ■■ -
sp_hit_id O15042
Definition sp|O15042|SR140_HUMAN U2-associated protein SR140 OS=Homo sapiens
Align length 106
Score (bit) 90.9
E-value 5.0e-18
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914471|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_C08.
         (605 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O15042|SR140_HUMAN U2-associated protein SR140 OS=Homo sapien...    91   5e-18
sp|Q6NV83|SR140_MOUSE U2-associated protein SR140 OS=Mus musculu...    91   6e-18
sp|Q5R7X2|SR140_PONAB U2-associated protein SR140 OS=Pongo abeli...    88   4e-17
sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 P...    39   0.016
sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 P...    39   0.016
sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3 OS=Arabido...    38   0.046
sp|Q60899|ELAV2_MOUSE ELAV-like protein 2 OS=Mus musculus GN=Ela...    38   0.046
sp|Q8CH84|ELAV2_RAT ELAV-like protein 2 OS=Rattus norvegicus GN=...    37   0.060
sp|Q5R9Z6|ELAV2_PONAB ELAV-like protein 2 OS=Pongo abelii GN=ELA...    37   0.060
sp|Q12926|ELAV2_HUMAN ELAV-like protein 2 OS=Homo sapiens GN=ELA...    37   0.060
sp|P31209|PABP_SCHPO Polyadenylate-binding protein, cytoplasmic ...    37   0.078
sp|Q2GSX8|PABP_CHAGB Polyadenylate-binding protein, cytoplasmic ...    37   0.078
sp|A4QUF0|PABP_MAGGR Polyadenylate-binding protein, cytoplasmic ...    37   0.10 
sp|P32831|NGR1_YEAST Negative growth regulatory protein NGR1 OS=...    37   0.10 
sp|Q5KBW2|PABP_CRYNE Polyadenylate-binding protein, cytoplasmic ...    36   0.13 
sp|Q09442|SF3B4_CAEEL Splicing factor 3B subunit 4 OS=Caenorhabd...    36   0.17 
sp|A5DM21|PABP_PICGU Polyadenylate-binding protein, cytoplasmic ...    36   0.17 
sp|Q6CDH3|PABP_YARLI Polyadenylate-binding protein, cytoplasmic ...    35   0.23 
sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 OS=Arabido...    35   0.23 
sp|Q9EPH8|PABP1_RAT Polyadenylate-binding protein 1 OS=Rattus no...    35   0.23 
sp|P29341|PABP1_MOUSE Polyadenylate-binding protein 1 OS=Mus mus...    35   0.23 
sp|Q60900|ELAV3_MOUSE ELAV-like protein 3 OS=Mus musculus GN=Ela...    35   0.23 
sp|Q14576|ELAV3_HUMAN ELAV-like protein 3 OS=Homo sapiens GN=ELA...    35   0.23 
sp|Q7S6N6|PABP_NEUCR Polyadenylate-binding protein, cytoplasmic ...    35   0.30 
sp|Q6PHZ5|RB15B_MOUSE Putative RNA-binding protein 15B OS=Mus mu...    35   0.39 
sp|Q8NDT2|RB15B_HUMAN Putative RNA-binding protein 15B OS=Homo s...    35   0.39 
sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic ...    35   0.39 
sp|Q5R8F7|PABP1_PONAB Polyadenylate-binding protein 1 OS=Pongo a...    35   0.39 
sp|P11940|PABP1_HUMAN Polyadenylate-binding protein 1 OS=Homo sa...    35   0.39 
sp|P61286|PABP1_BOVIN Polyadenylate-binding protein 1 OS=Bos tau...    35   0.39 

>sp|O15042|SR140_HUMAN U2-associated protein SR140 OS=Homo sapiens
           GN=SR140 PE=1 SV=2
          Length = 1029

 Score = 90.9 bits (224), Expect = 5e-18
 Identities = 48/106 (45%), Positives = 65/106 (61%), Gaps = 7/106 (6%)
 Frame = -2

Query: 304 NIDHFMEELKMEQEMREKRSLDREYRSR-------ESRQKGNLSPPTRFDELPEDLDGKL 146
           N++ F EELK  QE R++R   +   SR          Q+ ++  P+R +     LD   
Sbjct: 203 NLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNRSSGVLDDYA 262

Query: 145 PGSFDDGDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIIWP 8
           PGS D GDP TTNLY+GN+ PQ++E  L + FGRFGP+ASVKI+WP
Sbjct: 263 PGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWP 308


>sp|Q6NV83|SR140_MOUSE U2-associated protein SR140 OS=Mus musculus
           GN=Sr140 PE=2 SV=2
          Length = 1029

 Score = 90.5 bits (223), Expect = 6e-18
 Identities = 48/106 (45%), Positives = 65/106 (61%), Gaps = 7/106 (6%)
 Frame = -2

Query: 304 NIDHFMEELKMEQEMREKRSLDREYRSR-------ESRQKGNLSPPTRFDELPEDLDGKL 146
           N++ F EELK  QE R++R   +   SR          Q+ ++  P+R +     LD   
Sbjct: 203 NLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDVPSRRNRSSGVLDDYA 262

Query: 145 PGSFDDGDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIIWP 8
           PGS D GDP TTNLY+GN+ PQ++E  L + FGRFGP+ASVKI+WP
Sbjct: 263 PGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWP 308


>sp|Q5R7X2|SR140_PONAB U2-associated protein SR140 OS=Pongo abelii
           GN=SR140 PE=2 SV=1
          Length = 1028

 Score = 87.8 bits (216), Expect = 4e-17
 Identities = 48/106 (45%), Positives = 65/106 (61%), Gaps = 7/106 (6%)
 Frame = -2

Query: 304 NIDHFMEELKMEQEMREKRSLDREYRSR-------ESRQKGNLSPPTRFDELPEDLDGKL 146
           N++ F EELK  QE R++R   +   SR          Q+ ++  P+R +     LD   
Sbjct: 203 NLELFKEELKQIQEERDERHKTKGRLSRFEPPQSDSDGQRRSMDAPSRRNR-SSVLDDYA 261

Query: 145 PGSFDDGDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIIWP 8
           PGS D GDP TTNLY+GN+ PQ++E  L + FGRFGP+ASVKI+WP
Sbjct: 262 PGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWP 307


>sp|P70318|TIAR_MOUSE Nucleolysin TIAR OS=Mus musculus GN=Tial1 PE=2
           SV=1
          Length = 392

 Score = 39.3 bits (90), Expect = 0.016
 Identities = 20/40 (50%), Positives = 26/40 (65%)
 Frame = -2

Query: 133 DDGDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKII 14
           DDG P+T  LYVGNL+  V E  +L+ F + GP  S K+I
Sbjct: 4   DDGQPRT--LYVGNLSRDVTEVLILQLFSQIGPCKSCKMI 41


>sp|Q01085|TIAR_HUMAN Nucleolysin TIAR OS=Homo sapiens GN=TIAL1 PE=1
           SV=1
          Length = 375

 Score = 39.3 bits (90), Expect = 0.016
 Identities = 20/40 (50%), Positives = 26/40 (65%)
 Frame = -2

Query: 133 DDGDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKII 14
           DDG P+T  LYVGNL+  V E  +L+ F + GP  S K+I
Sbjct: 4   DDGQPRT--LYVGNLSRDVTEVLILQLFSQIGPCKSCKMI 41


>sp|O64380|PABP3_ARATH Polyadenylate-binding protein 3
           OS=Arabidopsis thaliana GN=PAB3 PE=2 SV=1
          Length = 660

 Score = 37.7 bits (86), Expect = 0.046
 Identities = 16/36 (44%), Positives = 26/36 (72%)
 Frame = -2

Query: 121 PQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKII 14
           P+ TN+YV NL  ++ E+ L +TFG+FG I+S  ++
Sbjct: 226 PRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVM 261


>sp|Q60899|ELAV2_MOUSE ELAV-like protein 2 OS=Mus musculus GN=Elavl2
           PE=2 SV=1
          Length = 360

 Score = 37.7 bits (86), Expect = 0.046
 Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = -2

Query: 187 TRFDELPEDLDGKLPGSFDDGDPQTT-NLYVGNLAPQVDENFLLRTFGRFGPIASVKII 14
           +RF  +  D    L G    G P T   ++V NLAP  DE+ L + FG FG + +VK+I
Sbjct: 251 SRFSPMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVI 309


>sp|Q8CH84|ELAV2_RAT ELAV-like protein 2 OS=Rattus norvegicus
           GN=Elavl2 PE=2 SV=1
          Length = 359

 Score = 37.4 bits (85), Expect = 0.060
 Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
 Frame = -2

Query: 169 PEDLDG--KLPGSFDDGDPQTT-NLYVGNLAPQVDENFLLRTFGRFGPIASVKII 14
           P  +DG   L G    G P T   ++V NLAP  DE+ L + FG FG + +VK+I
Sbjct: 254 PMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVI 308


>sp|Q5R9Z6|ELAV2_PONAB ELAV-like protein 2 OS=Pongo abelii GN=ELAVL2
           PE=2 SV=1
          Length = 359

 Score = 37.4 bits (85), Expect = 0.060
 Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
 Frame = -2

Query: 169 PEDLDG--KLPGSFDDGDPQTT-NLYVGNLAPQVDENFLLRTFGRFGPIASVKII 14
           P  +DG   L G    G P T   ++V NLAP  DE+ L + FG FG + +VK+I
Sbjct: 254 PMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVI 308


>sp|Q12926|ELAV2_HUMAN ELAV-like protein 2 OS=Homo sapiens GN=ELAVL2
           PE=1 SV=2
          Length = 359

 Score = 37.4 bits (85), Expect = 0.060
 Identities = 23/55 (41%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
 Frame = -2

Query: 169 PEDLDG--KLPGSFDDGDPQTT-NLYVGNLAPQVDENFLLRTFGRFGPIASVKII 14
           P  +DG   L G    G P T   ++V NLAP  DE+ L + FG FG + +VK+I
Sbjct: 254 PMTIDGMTSLAGINIPGHPGTGWCIFVYNLAPDADESILWQMFGPFGAVTNVKVI 308
tr_hit_id A5BQS1
Definition tr|A5BQS1|A5BQS1_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 164
Score (bit) 184.0
E-value 3.0e-46
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914471|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_C08.
         (605 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5BQS1|A5BQS1_VITVI Putative uncharacterized protein OS=Vitis...   184   3e-46
tr|A7P661|A7P661_VITVI Chromosome chr4 scaffold_6, whole genome ...   180   4e-45
tr|A9TAZ0|A9TAZ0_PHYPA Predicted protein OS=Physcomitrella paten...   161   2e-41
tr|Q9C5J3|Q9C5J3_ARATH Putative uncharacterized protein At5g2506...   166   1e-39
tr|Q6ETK6|Q6ETK6_ORYSJ Putative U2-associated SR140 protein OS=O...   161   2e-38
tr|B8AIW7|B8AIW7_ORYSI Putative uncharacterized protein OS=Oryza...   161   2e-38
tr|A3A3S9|A3A3S9_ORYSJ Putative uncharacterized protein OS=Oryza...   161   2e-38
tr|A9SYF0|A9SYF0_PHYPA Predicted protein OS=Physcomitrella paten...   154   4e-38
tr|Q6ETK5|Q6ETK5_ORYSJ RNA recognition motif (RRM)-containing pr...   145   2e-33
tr|Q9LEV9|Q9LEV9_ARATH Putative uncharacterized protein T30N20_7...   127   5e-28
tr|B4DK81|B4DK81_HUMAN cDNA FLJ60621 OS=Homo sapiens PE=2 SV=1         91   5e-17
tr|B0S5J4|B0S5J4_DANRE Novel protein similar to vertebrate U2-as...    89   3e-16
tr|B5DEC9|B5DEC9_XENTR Putative uncharacterized protein OS=Xenop...    88   3e-16
tr|B0S5J3|B0S5J3_DANRE Novel protein similar to vertebrate U2-as...    84   6e-15
tr|B3RIF0|B3RIF0_TRIAD Putative uncharacterized protein OS=Trich...    83   1e-14
tr|Q4S4Z8|Q4S4Z8_TETNG Chromosome 6 SCAF14737, whole genome shot...    82   2e-14
tr|A8J7H0|A8J7H0_CHLRE Predicted protein OS=Chlamydomonas reinha...    82   2e-14
tr|Q16N86|Q16N86_AEDAE Gar2, putative (Fragment) OS=Aedes aegypt...    82   3e-14
tr|B4J8Q1|B4J8Q1_DROGR GH20523 OS=Drosophila grimshawi GN=GH2052...    81   4e-14
tr|Q9W2N6|Q9W2N6_DROME CG9346 OS=Drosophila melanogaster GN=CG93...    81   5e-14
tr|Q7Q7V4|Q7Q7V4_ANOGA AGAP005006-PA OS=Anopheles gambiae GN=AGA...    81   5e-14
tr|Q7K0X5|Q7K0X5_DROME LD23810p (Fragment) OS=Drosophila melanog...    81   5e-14
tr|B6P0I3|B6P0I3_BRAFL Putative uncharacterized protein OS=Branc...    81   5e-14
tr|B4H4Z0|B4H4Z0_DROPE GL10142 OS=Drosophila persimilis GN=GL101...    81   5e-14
tr|B0X5E1|B0X5E1_CULQU U2-associated SR140 protein OS=Culex quin...    81   5e-14
tr|Q28X33|Q28X33_DROPS GA21718 OS=Drosophila pseudoobscura pseud...    80   7e-14
tr|B4LQ74|B4LQ74_DROVI GJ21992 OS=Drosophila virilis GN=GJ21992 ...    80   7e-14
tr|B4QFK4|B4QFK4_DROSI GD11555 OS=Drosophila simulans GN=GD11555...    80   9e-14
tr|B4I7H9|B4I7H9_DROSE GM15794 OS=Drosophila sechellia GN=GM1579...    80   9e-14
tr|B3ME93|B3ME93_DROAN GF11923 OS=Drosophila ananassae GN=GF1192...    80   9e-14

>tr|A5BQS1|A5BQS1_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_025939 PE=4 SV=1
          Length = 1384

 Score =  184 bits (466), Expect(2) = 3e-46
 Identities = 102/164 (62%), Positives = 115/164 (70%), Gaps = 3/164 (1%)
 Frame = -2

Query: 490 NERSKAEGAGSK-EDSSGSKKPGSRYVPSFIPPGLAAVVNSAXXXXXXXXXXXXXXXXXX 314
           NER K E  G K +D     K GSRYVPSFIPP LAA                       
Sbjct: 180 NERLKTESEGEKSKDGVSVPKKGSRYVPSFIPPPLAA---KGXEPDKKKEEEKPKEREKG 236

Query: 313 XXRNIDHFMEELKMEQEMREKRSLDREYRSRESRQKGNLSPPTRFDELPEDLD--GKLPG 140
             RNIDHFMEELK EQEMRE+R+ +R+ + R+ R   + +PP+RFDELP+D D  GKLPG
Sbjct: 237 KSRNIDHFMEELKHEQEMRERRNQERD-QWRDGRHNDSSAPPSRFDELPDDFDPSGKLPG 295

Query: 139 SFDDGDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIIWP 8
           SFDDGDPQTTNLYVGNL+PQVDENFLLRTFGRFGPIASVKI+WP
Sbjct: 296 SFDDGDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWP 339



 Score = 25.4 bits (54), Expect(2) = 3e-46
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 603 VESFKAEDGPGAKAFCAGRNDQP 535
           VESF+ ++ PG+K F  G    P
Sbjct: 157 VESFQGDNAPGSKTFVRGGTINP 179


>tr|A7P661|A7P661_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032794001
           PE=4 SV=1
          Length = 928

 Score =  180 bits (456), Expect(2) = 4e-45
 Identities = 100/164 (60%), Positives = 113/164 (68%), Gaps = 3/164 (1%)
 Frame = -2

Query: 490 NERSKAEGAGSK-EDSSGSKKPGSRYVPSFIPPGLAAVVNSAXXXXXXXXXXXXXXXXXX 314
           NER K E  G K +D     K GSRYVPSFIPP LAA                       
Sbjct: 62  NERVKTESEGEKSKDGVSVPKKGSRYVPSFIPPPLAA---KGKEPDKKKEEEKPKEREKG 118

Query: 313 XXRNIDHFMEELKMEQEMREKRSLDREYRSRESRQKGNLSPPTRFDELPEDLD--GKLPG 140
             RNIDHFMEELK EQEMRE+R+ +R+ + R+ R   + + P+RFDELP+D D  GKLPG
Sbjct: 119 KSRNIDHFMEELKHEQEMRERRNQERD-QWRDGRHNDSSALPSRFDELPDDFDPSGKLPG 177

Query: 139 SFDDGDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIIWP 8
           SFDDGDPQTTNLYVGNL+PQVDENFLLRTFGRFGPIASVKI+WP
Sbjct: 178 SFDDGDPQTTNLYVGNLSPQVDENFLLRTFGRFGPIASVKIMWP 221



 Score = 25.4 bits (54), Expect(2) = 4e-45
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -3

Query: 603 VESFKAEDGPGAKAFCAGRNDQP 535
           VESF+ ++ PG+K F  G    P
Sbjct: 39  VESFQGDNAPGSKTFVRGGTINP 61


>tr|A9TAZ0|A9TAZ0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_193248 PE=4 SV=1
          Length = 990

 Score =  161 bits (407), Expect(2) = 2e-41
 Identities = 90/153 (58%), Positives = 101/153 (66%), Gaps = 2/153 (1%)
 Frame = -2

Query: 460 SKEDSSGSKKPGSRYVPSFIPPGLAAVVNSAXXXXXXXXXXXXXXXXXXXXRNIDHFMEE 281
           S   S+ SKKPGSRYVPSFIPPGLAA+VN                      RNI HFMEE
Sbjct: 73  STPTSAASKKPGSRYVPSFIPPGLAAMVNRDKDSEKRRDEEQPKDRDRGTSRNIHHFMEE 132

Query: 280 LKMEQEMREKRSLDREYRSRESRQKGNLSPPTRFDELPE--DLDGKLPGSFDDGDPQTTN 107
           LK EQE R+ R+ +RE R  + R + +         L +  DLD K  GSFD+GDPQTTN
Sbjct: 133 LKREQEARDTRTAERENRRNDRRSQSSGIADQMIMGLDDAGDLDDKF-GSFDEGDPQTTN 191

Query: 106 LYVGNLAPQVDENFLLRTFGRFGPIASVKIIWP 8
           LYVGNLAPQVDENFLLRTFGRFGPIASVKI+WP
Sbjct: 192 LYVGNLAPQVDENFLLRTFGRFGPIASVKIMWP 224



 Score = 31.6 bits (70), Expect(2) = 2e-41
 Identities = 14/23 (60%), Positives = 15/23 (65%)
 Frame = -3

Query: 603 VESFKAEDGPGAKAFCAGRNDQP 535
           VESFKA+D PG KAF  G    P
Sbjct: 39  VESFKADDAPGGKAFVRGGTINP 61


>tr|Q9C5J3|Q9C5J3_ARATH Putative uncharacterized protein At5g25060
           OS=Arabidopsis thaliana GN=At5g25060 PE=1 SV=1
          Length = 946

 Score =  166 bits (419), Expect(2) = 1e-39
 Identities = 93/157 (59%), Positives = 109/157 (69%), Gaps = 1/157 (0%)
 Frame = -2

Query: 475 AEGAGSKEDSSGSKKPGSRYVPSFIPPGLAAVVNSAXXXXXXXXXXXXXXXXXXXXRNID 296
           +EG  SK+  S SKK GSRYVPSF+PP LA+                         RNID
Sbjct: 68  SEGEKSKDGGSVSKK-GSRYVPSFLPPPLAS---KGKEPEKKREEERPREREKGKTRNID 123

Query: 295 HFMEELKMEQEMREKRSLDREYRSRESRQKGNLSPPTRFDELPEDLDGK-LPGSFDDGDP 119
           +FMEELK EQEMRE+R+ DR+       ++G+ SP +RFDELP+D D    PGSFDDGDP
Sbjct: 124 NFMEELKREQEMRERRNQDRD-------RQGDSSPSSRFDELPDDFDPSGRPGSFDDGDP 176

Query: 118 QTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIIWP 8
           QTTNLYVGNL+P+VDENFLLRTFGRFGPIASVKI+WP
Sbjct: 177 QTTNLYVGNLSPKVDENFLLRTFGRFGPIASVKIMWP 213



 Score = 21.6 bits (44), Expect(2) = 1e-39
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -1

Query: 566 RLFVRGGMINP 534
           + FVRGG INP
Sbjct: 50  KTFVRGGTINP 60


>tr|Q6ETK6|Q6ETK6_ORYSJ Putative U2-associated SR140 protein
           OS=Oryza sativa subsp. japonica GN=P0544B02.29-2 PE=4
           SV=1
          Length = 954

 Score =  161 bits (408), Expect = 2e-38
 Identities = 90/165 (54%), Positives = 109/165 (66%), Gaps = 2/165 (1%)
 Frame = -2

Query: 496 SANERSKAEGAGSKEDSSGSKKPGSRYVPSFIPPGLAAVVNSAXXXXXXXXXXXXXXXXX 317
           +A  R  +EG  SK+  S  KK GSRYVPSF+PP      +                   
Sbjct: 56  NAKLRIDSEGGKSKDGGSVPKK-GSRYVPSFLPPSFGKEPDKKKEEERPKEKERRKPRV- 113

Query: 316 XXXRNIDHFMEELKMEQEMREKRSLDREYRSRESRQKGNLSPPTRFDELPEDLD--GKLP 143
                ID FMEELK E+E+R+KR+ +RE + RE R     +  +RFDELP++LD  GKLP
Sbjct: 114 -----IDEFMEELKFEKELRQKRNQERE-QWREGRHTDTSASSSRFDELPDELDPIGKLP 167

Query: 142 GSFDDGDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIIWP 8
           GSFDDGDPQTTNLYVGNL+P+VDENFL+RTFGRFGPIASVKI+WP
Sbjct: 168 GSFDDGDPQTTNLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWP 212


>tr|B8AIW7|B8AIW7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_06097 PE=4 SV=1
          Length = 997

 Score =  161 bits (408), Expect = 2e-38
 Identities = 90/165 (54%), Positives = 109/165 (66%), Gaps = 2/165 (1%)
 Frame = -2

Query: 496 SANERSKAEGAGSKEDSSGSKKPGSRYVPSFIPPGLAAVVNSAXXXXXXXXXXXXXXXXX 317
           +A  R  +EG  SK+  S  KK GSRYVPSF+PP      +                   
Sbjct: 83  NAKLRIDSEGGKSKDGGSVPKK-GSRYVPSFLPPSFGKEPDKKKEEERPKEKERRKPRV- 140

Query: 316 XXXRNIDHFMEELKMEQEMREKRSLDREYRSRESRQKGNLSPPTRFDELPEDLD--GKLP 143
                ID FMEELK E+E+R+KR+ +RE + RE R     +  +RFDELP++LD  GKLP
Sbjct: 141 -----IDEFMEELKFEKELRQKRNQERE-QWREGRHTDTSASSSRFDELPDELDPIGKLP 194

Query: 142 GSFDDGDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIIWP 8
           GSFDDGDPQTTNLYVGNL+P+VDENFL+RTFGRFGPIASVKI+WP
Sbjct: 195 GSFDDGDPQTTNLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWP 239


>tr|A3A3S9|A3A3S9_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_005451 PE=3 SV=1
          Length = 1379

 Score =  161 bits (408), Expect = 2e-38
 Identities = 90/165 (54%), Positives = 109/165 (66%), Gaps = 2/165 (1%)
 Frame = -2

Query: 496 SANERSKAEGAGSKEDSSGSKKPGSRYVPSFIPPGLAAVVNSAXXXXXXXXXXXXXXXXX 317
           +A  R  +EG  SK+  S  KK GSRYVPSF+PP      +                   
Sbjct: 76  NAKLRIDSEGGKSKDGGSVPKK-GSRYVPSFLPPSFGKEPDKKKEEERPKEKERRKPRV- 133

Query: 316 XXXRNIDHFMEELKMEQEMREKRSLDREYRSRESRQKGNLSPPTRFDELPEDLD--GKLP 143
                ID FMEELK E+E+R+KR+ +RE + RE R     +  +RFDELP++LD  GKLP
Sbjct: 134 -----IDEFMEELKFEKELRQKRNQERE-QWREGRHTDTSASSSRFDELPDELDPIGKLP 187

Query: 142 GSFDDGDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIIWP 8
           GSFDDGDPQTTNLYVGNL+P+VDENFL+RTFGRFGPIASVKI+WP
Sbjct: 188 GSFDDGDPQTTNLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWP 232


>tr|A9SYF0|A9SYF0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_234486 PE=4 SV=1
          Length = 990

 Score =  154 bits (388), Expect(2) = 4e-38
 Identities = 90/153 (58%), Positives = 98/153 (64%), Gaps = 2/153 (1%)
 Frame = -2

Query: 460 SKEDSSGSKKPGSRYVPSFIPPGLAAVVNSAXXXXXXXXXXXXXXXXXXXXRNIDHFMEE 281
           +K  SS S  P   YVPSFIPPGLAA+VN                      RNIDHFMEE
Sbjct: 63  AKLPSSESTSPNP-YVPSFIPPGLAAMVNKEKEPEKRRDEERSKDRDRGKSRNIDHFMEE 121

Query: 280 LKMEQEMREKRSLDREYR--SRESRQKGNLSPPTRFDELPEDLDGKLPGSFDDGDPQTTN 107
           LK EQE R+KR+ +RE R   R S   G         +   DLD KL GSFD+GDPQTTN
Sbjct: 122 LKREQEARDKRTAERENRRNDRRSLNSGMSDQMMMGPDESGDLDDKL-GSFDEGDPQTTN 180

Query: 106 LYVGNLAPQVDENFLLRTFGRFGPIASVKIIWP 8
           LYVGNLAPQVDENFLLRTFGRFGPIASVKI+WP
Sbjct: 181 LYVGNLAPQVDENFLLRTFGRFGPIASVKIMWP 213



 Score = 28.1 bits (61), Expect(2) = 4e-38
 Identities = 13/23 (56%), Positives = 14/23 (60%)
 Frame = -3

Query: 603 VESFKAEDGPGAKAFCAGRNDQP 535
           VESFKA+  PG KAF  G    P
Sbjct: 39  VESFKADSVPGGKAFVRGGTINP 61


>tr|Q6ETK5|Q6ETK5_ORYSJ RNA recognition motif (RRM)-containing
           protein-like OS=Oryza sativa subsp. japonica
           GN=P0544B02.29-1 PE=4 SV=1
          Length = 589

 Score =  145 bits (365), Expect = 2e-33
 Identities = 71/100 (71%), Positives = 85/100 (85%), Gaps = 2/100 (2%)
 Frame = -2

Query: 301 IDHFMEELKMEQEMREKRSLDREYRSRESRQKGNLSPPTRFDELPEDLD--GKLPGSFDD 128
           ID FMEELK E+E+R+KR+ +RE + RE R     +  +RFDELP++LD  GKLPGSFDD
Sbjct: 73  IDEFMEELKFEKELRQKRNQERE-QWREGRHTDTSASSSRFDELPDELDPIGKLPGSFDD 131

Query: 127 GDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIIWP 8
           GDPQTTNLYVGNL+P+VDENFL+RTFGRFGPIASVKI+WP
Sbjct: 132 GDPQTTNLYVGNLSPKVDENFLMRTFGRFGPIASVKIMWP 171


>tr|Q9LEV9|Q9LEV9_ARATH Putative uncharacterized protein T30N20_70
           OS=Arabidopsis thaliana GN=T30N20_70 PE=4 SV=1
          Length = 957

 Score =  127 bits (319), Expect = 5e-28
 Identities = 69/101 (68%), Positives = 80/101 (79%), Gaps = 2/101 (1%)
 Frame = -2

Query: 304 NIDHFMEELKMEQEMREKRSLDREYRSRESRQKGNLSPPTRFDELPEDLD--GKLPGSFD 131
           NIDHF+EELK EQE+RE+R+ DRE  SR+       S  +RFDELP+  D  G+L GS D
Sbjct: 109 NIDHFVEELKREQEIRERRNQDRE-NSRDHNSDNTSS--SRFDELPDYFDPSGRL-GSLD 164

Query: 130 DGDPQTTNLYVGNLAPQVDENFLLRTFGRFGPIASVKIIWP 8
           DGDPQTTNLYV NL+ +VDENFLLRTFGRFGPIASVKI+WP
Sbjct: 165 DGDPQTTNLYVVNLSSKVDENFLLRTFGRFGPIASVKIMWP 205