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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914488
Clone id YMU001_000059_E01
Library
Length 492
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000059_E01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CACAATTGGAGGAAAACGGAACAGATGTGAATGAACAGGACATTGGTTGAGTTTCATGGA
AGAGAAGCTTCAAGCTTCATAACAATGACGAAGGGCACAACGAAGTTGCCAAAAACCAAT
AGAAGGGCATTTTCAAGTTTGGAAACGCTGTAGGAATCATTGAGGGGCTTATAACCATGT
TGGCTTCTCAGCCATTATGAGCTGCATTCCATTCCGAATGGTCTTGTGGATGTGGGGGGC
GGTGATGGAGATATTACTCAACATAAAATGTCAACGGATGGTGATATTTTGGCTTGGGAG
CTATGAGCTGCGTTGTATTGTATTCTCCTAAATATAAACCAGTTTCTCGAGCATCCTGTA
GTTATTTTAAAGGAGGAAATTTGGCTCTCTCTGAAACTAGCAAGAGGCTGAAAGAGAAGA
TGCTTTGGAGCTGGTGGAGGGCAATGTAAGGACTCAGGAGTTGACTTGCATTATGTATGA
CGTGATACTGTG
■■Homology search results ■■ -
sp_hit_id P97772
Definition sp|P97772|GRM1_MOUSE Metabotropic glutamate receptor 1 OS=Mus musculus
Align length 28
Score (bit) 30.0
E-value 5.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914488|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_E01.
         (492 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P97772|GRM1_MOUSE Metabotropic glutamate receptor 1 OS=Mus mu...    30   5.9  

>sp|P97772|GRM1_MOUSE Metabotropic glutamate receptor 1 OS=Mus
            musculus GN=Grm1 PE=2 SV=2
          Length = 1199

 Score = 30.0 bits (66), Expect = 5.9
 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
 Frame = -2

Query: 452  SLHCPPPAPKHLLFQP--LASFRESQIS 375
            SL+ PPP P+HL   P  L++FRE  IS
Sbjct: 1070 SLYPPPPPPQHLQMLPLQLSTFREEPIS 1097
tr_hit_id Q4Z5E2
Definition tr|Q4Z5E2|Q4Z5E2_PLABE Putative uncharacterized protein (Fragment) OS=Plasmodium berghei
Align length 37
Score (bit) 35.0
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914488|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_E01.
         (492 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q4Z5E2|Q4Z5E2_PLABE Putative uncharacterized protein (Fragmen...    35   1.9  
tr|Q6S9V4|Q6S9V4_MUSDO DSXF OS=Musca domestica GN=dsx PE=2 SV=1        34   4.2  
tr|Q6S9V3|Q6S9V3_MUSDO DSXM OS=Musca domestica GN=dsx PE=2 SV=1        34   4.2  
tr|A1DIY2|A1DIY2_NEOFI Sulfatase domain protein OS=Neosartorya f...    30   5.3  
tr|Q93VZ9|Q93VZ9_ORYSJ Putative uncharacterized protein OSJNBa00...    33   7.1  
tr|Q6Q0M8|Q6Q0M8_ORYSJ Os10g0114500 protein OS=Oryza sativa subs...    33   7.1  
tr|A3C1Z9|A3C1Z9_ORYSJ Putative uncharacterized protein OS=Oryza...    33   7.1  

>tr|Q4Z5E2|Q4Z5E2_PLABE Putative uncharacterized protein (Fragment)
           OS=Plasmodium berghei GN=PB000627.00.0 PE=4 SV=1
          Length = 478

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
 Frame = +3

Query: 51  VSWKRSFKLHNNDEGHNEVAK--NQ*KGIFKFGNAVG 155
           +S K++ K+HNNDE  N V K  N+ K I KF N +G
Sbjct: 89  MSNKKNIKIHNNDEQENNVRKNMNKKKNIIKFMNTLG 125


>tr|Q6S9V4|Q6S9V4_MUSDO DSXF OS=Musca domestica GN=dsx PE=2 SV=1
          Length = 397

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 313 TQLIAPKPKYHHPLTFYVE*YLHHRPPHPQDH 218
           T L+     +HHPL  ++   LHH P HP  H
Sbjct: 116 TALLNAHHHHHHPLPHHITQQLHHHPHHPHPH 147


>tr|Q6S9V3|Q6S9V3_MUSDO DSXM OS=Musca domestica GN=dsx PE=2 SV=1
          Length = 527

 Score = 33.9 bits (76), Expect = 4.2
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 313 TQLIAPKPKYHHPLTFYVE*YLHHRPPHPQDH 218
           T L+     +HHPL  ++   LHH P HP  H
Sbjct: 116 TALLNAHHHHHHPLPHHITQQLHHHPHHPHPH 147


>tr|A1DIY2|A1DIY2_NEOFI Sulfatase domain protein OS=Neosartorya
           fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181)
           GN=NFIA_093010 PE=4 SV=1
          Length = 887

 Score = 30.0 bits (66), Expect(2) = 5.3
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 6/43 (13%)
 Frame = -2

Query: 173 YKPLNDSYSVSKLENALL------LVFGNFVVPFVIVMKLEAS 63
           Y P+ D   +S LEN +L      L  GN  +  VI++KLE++
Sbjct: 368 YNPVKDPLHISNLENPVLEPLKEALASGNVSIKHVILLKLEST 410



 Score = 22.7 bits (47), Expect(2) = 5.3
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 247 HHRPPHPQDH 218
           HH PPH  DH
Sbjct: 346 HHGPPHGPDH 355


>tr|Q93VZ9|Q93VZ9_ORYSJ Putative uncharacterized protein
           OSJNBa0092N12.11 (Putative uncharacterized protein)
           (GAGA binding protein-like family protein) (Putative
           uncharacterized protein OJ1014H12.2) (Putative
           uncharacterized protein OSJNBa0092N12.5) OS=Oryza sativa
           subsp. japonica GN=OSJNBa0092N12.11 PE=4 SV=1
          Length = 344

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
 Frame = -3

Query: 352 ARETGLYL-----GEYNTTQLIAPKPKYHHPLTFYVE*YLHHRPPHPQDHSEWNAAHNG* 188
           AR  GL L      E +T QL++  P  HH    +V  + HH+P HP+D      A+ G 
Sbjct: 19  ARNLGLQLMSSVPAERDTKQLLSGSPFLHHQHQQHVP-HHHHQPHHPRDCGANGNANGG- 76

Query: 187 EANMVISPSMIPTAFPNLKMPF 122
                + P     A P++ M F
Sbjct: 77  ----AMPPPPATEAPPSMPMNF 94


>tr|Q6Q0M8|Q6Q0M8_ORYSJ Os10g0114500 protein OS=Oryza sativa subsp.
           japonica GN=Os10g0114500 PE=2 SV=1
          Length = 341

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
 Frame = -3

Query: 352 ARETGLYL-----GEYNTTQLIAPKPKYHHPLTFYVE*YLHHRPPHPQDHSEWNAAHNG* 188
           AR  GL L      E +T QL++  P  HH    +V  + HH+P HP+D      A+ G 
Sbjct: 19  ARNLGLQLMSSVPAERDTKQLLSGSPFLHHQHQQHVP-HHHHQPHHPRDCGANGNANGG- 76

Query: 187 EANMVISPSMIPTAFPNLKMPF 122
                + P     A P++ M F
Sbjct: 77  ----AMPPPPATEAPPSMPMNF 94


>tr|A3C1Z9|A3C1Z9_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_029321 PE=4 SV=1
          Length = 254

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
 Frame = -3

Query: 352 ARETGLYL-----GEYNTTQLIAPKPKYHHPLTFYVE*YLHHRPPHPQDHSEWNAAHNG* 188
           AR  GL L      E +T QL++  P  HH    +V  + HH+P HP+D      A+ G 
Sbjct: 19  ARNLGLQLMSSVPAERDTKQLLSGSPFLHHQHQQHVP-HHHHQPHHPRDCGANGNANGG- 76

Query: 187 EANMVISPSMIPTAFPNLKMPF 122
                + P     A P++ M F
Sbjct: 77  ----AMPPPPATEAPPSMPMNF 94