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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914493
Clone id YMU001_000059_E06
Library
Length 501
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000059_E06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTGTTTTTTTTTTTTTTTTTTTACTCCGTCCAGTTAACTGATTTGATTATGCTGTTAAA
ATCATCTTATACATCAAACTAAGCATTACAGAAGCTCAAGGAAGTCAACCCATAAAATAT
GTAAGGGGCATTCCCTTTTATGTCTCTGTGAGCATGCCACATGGAACTTGATTGTGACAT
CTCATTCCTGCAACATGAATCAGTCAGATCTCTCCTACCTTCATTCTTGGTTGTTTCCCG
CATAAACATTTTATCTGTCTCCTCTACCACTCGCTGCAAAAATTGTTCTTCACCTTGAGA
CTTTTTCTTTCATGAGTCGTTAATAATCAGCTAGCCTCTCTAGCTCATACCACTCACTTT
ACGCACTTGAATATGATGGGTGGATTCTGTGCGCCATATAGGTGTTCTGCCACTCTGCAC
GAGTGCAACCTCTTCCCCAGCTTTAAGTAAACCACGCTTCTGCAAAAGAGCCAGTGCTTC
AGTAAAGGTCTTCTCTGCATC
■■Homology search results ■■ -
sp_hit_id P55964
Definition sp|P55964|KPYG_RICCO Pyruvate kinase isozyme G, chloroplastic (Fragment) OS=Ricinus communis
Align length 49
Score (bit) 71.2
E-value 2.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914493|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_E06.
         (478 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P55964|KPYG_RICCO Pyruvate kinase isozyme G, chloroplastic (F...    71   2e-12
sp|Q40546|KPYG_TOBAC Pyruvate kinase isozyme G, chloroplastic OS...    65   1e-10
sp|A5X7A0|SOBPA_DANRE Sine oculis-binding protein homolog OS=Dan...    30   7.4  
sp|Q56216|LEU1_THETH 2-isopropylmalate synthase (Fragment) OS=Th...    30   7.4  
sp|P17036|ZNF3_HUMAN Zinc finger protein 3 OS=Homo sapiens GN=ZN...    29   9.6  

>sp|P55964|KPYG_RICCO Pyruvate kinase isozyme G, chloroplastic
           (Fragment) OS=Ricinus communis PE=2 SV=1
          Length = 418

 Score = 71.2 bits (173), Expect = 2e-12
 Identities = 35/49 (71%), Positives = 38/49 (77%)
 Frame = -1

Query: 478 DAEKTFTEALALLQKRGLLKAGEEVALVQSGRTPIWRTESTHHIQVRKV 332
           DAE+TF+ AL LL  +GLL  GE V LVQSG  PIWR ESTHHIQVRKV
Sbjct: 368 DAEETFSRALQLLLNKGLLVEGEHVTLVQSGAQPIWRQESTHHIQVRKV 416


>sp|Q40546|KPYG_TOBAC Pyruvate kinase isozyme G, chloroplastic
           OS=Nicotiana tabacum PE=2 SV=1
          Length = 562

 Score = 65.5 bits (158), Expect = 1e-10
 Identities = 31/49 (63%), Positives = 37/49 (75%)
 Frame = -1

Query: 478 DAEKTFTEALALLQKRGLLKAGEEVALVQSGRTPIWRTESTHHIQVRKV 332
           DAE+TF+ A+ LL  + L+K G+ V LVQSG  PIWR  STHHIQVRKV
Sbjct: 512 DAEETFSRAIKLLLSKSLVKDGQYVTLVQSGAQPIWRRHSTHHIQVRKV 560


>sp|A5X7A0|SOBPA_DANRE Sine oculis-binding protein homolog OS=Danio
           rerio GN=sobpa PE=2 SV=1
          Length = 936

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = -1

Query: 277 SQGEEQFLQRVVEETDKM---FMRETTKNEGRRDLTDSCCRNEMSQSSSMWHAHRD 119
           S+GEE+  Q+    +D +   F ++T   +GR ++ D   + E S   S  H+H+D
Sbjct: 606 SRGEERDFQKAPPNSDTLSPEFSKQT--EQGRTNMADLMVKMENSGKGSSEHSHKD 659


>sp|Q56216|LEU1_THETH 2-isopropylmalate synthase (Fragment)
           OS=Thermus thermophilus GN=leuA PE=2 SV=1
          Length = 331

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = -1

Query: 478 DAEKTFTEALALLQKRGLLKAGEEVALVQSGRTPIWRTESTHHIQVRKVSGM 323
           + +K F     + +K+G L A E  ALV+S R P        H+Q    SG+
Sbjct: 166 EVKKLFARFKEIAEKKGPLSAEELQALVESEREPTSHFFQLEHVQFFSGSGL 217


>sp|P17036|ZNF3_HUMAN Zinc finger protein 3 OS=Homo sapiens GN=ZNF3
           PE=1 SV=3
          Length = 446

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 30/133 (22%), Positives = 48/133 (36%), Gaps = 6/133 (4%)
 Frame = -1

Query: 478 DAEKTFTEALALLQKRGLLKAGEEVALVQSGRTPIWRTESTHHIQVRKVSGMS*RG*LII 299
           D  KTF+ + AL+  R +    +     + G+T  W +  THH ++              
Sbjct: 260 DCGKTFSCSSALILHRRIHTGEKPYECNECGKTFSWSSTLTHHQRIH------------- 306

Query: 298 NDS*KKKSQGEEQFLQRVVEETDKMFMRETTK------NEGRRDLTDSCCRNEMSQSSSM 137
                    GE+ +      E  K F R +T       + G +    + C    SQSS +
Sbjct: 307 --------TGEKPY---ACNECGKAFSRSSTLIHHQRIHTGEKPYECNECGKAFSQSSHL 355

Query: 136 WHAHRDIKGNAPY 98
           +   R   G  PY
Sbjct: 356 YQHQRIHTGEKPY 368
tr_hit_id B8LM06
Definition tr|B8LM06|B8LM06_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 49
Score (bit) 80.5
E-value 4.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914493|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_E06.
         (478 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B8LM06|B8LM06_PICSI Putative uncharacterized protein OS=Picea...    80   4e-14
tr|B8LL33|B8LL33_PICSI Putative uncharacterized protein OS=Picea...    80   4e-14
tr|A5BTB0|A5BTB0_VITVI Pyruvate kinase OS=Vitis vinifera GN=VITI...    78   2e-13
tr|A9TCR0|A9TCR0_PHYPA Pyruvate kinase OS=Physcomitrella patens ...    78   2e-13
tr|A7QTR8|A7QTR8_VITVI Pyruvate kinase OS=Vitis vinifera GN=GSVI...    78   2e-13
tr|Q0JKP1|Q0JKP1_ORYSJ Pyruvate kinase (Fragment) OS=Oryza sativ...    76   9e-13
tr|B8ACE9|B8ACE9_ORYSI Putative uncharacterized protein OS=Oryza...    76   9e-13
tr|A7PC98|A7PC98_VITVI Pyruvate kinase OS=Vitis vinifera GN=GSVI...    76   9e-13
tr|A5C814|A5C814_VITVI Pyruvate kinase OS=Vitis vinifera GN=VITI...    76   9e-13
tr|A9TTX1|A9TTX1_PHYPA Pyruvate kinase OS=Physcomitrella patens ...    75   2e-12
tr|A2ZW77|A2ZW77_ORYSJ Pyruvate kinase OS=Oryza sativa subsp. ja...    74   3e-12
tr|Q4KWL7|Q4KWL7_MAIZE Putative pyruvate kinase (Fragment) OS=Ze...    73   8e-12
tr|B4FCQ0|B4FCQ0_MAIZE Putative uncharacterized protein OS=Zea m...    73   8e-12
tr|Q9FLW9|Q9FLW9_ARATH Pyruvate kinase OS=Arabidopsis thaliana G...    72   1e-11
tr|Q94AG4|Q94AG4_ARATH Pyruvate kinase OS=Arabidopsis thaliana P...    72   1e-11
tr|Q570A3|Q570A3_ARATH Pyruvate kinase OS=Arabidopsis thaliana G...    72   1e-11
tr|Q56ZT8|Q56ZT8_ARATH Pyruvate kinase OS=Arabidopsis thaliana G...    72   1e-11
tr|Q56XD5|Q56XD5_ARATH Pyruvate kinase OS=Arabidopsis thaliana G...    72   1e-11
tr|Q53WS7|Q53WS7_TOBAC Pyruvate kinase OS=Nicotiana tabacum GN=P...    65   1e-09
tr|Q9LQL3|Q9LQL3_ARATH Pyruvate kinase OS=Arabidopsis thaliana G...    63   6e-09
tr|Q93Z53|Q93Z53_ARATH Pyruvate kinase OS=Arabidopsis thaliana G...    63   6e-09
tr|B4FYH2|B4FYH2_MAIZE Putative uncharacterized protein OS=Zea m...    63   8e-09
tr|Q8S7N6|Q8S7N6_ORYSJ Pyruvate kinase OS=Oryza sativa subsp. ja...    61   2e-08
tr|B8BIC8|B8BIC8_ORYSI Putative uncharacterized protein OS=Oryza...    61   2e-08
tr|B4FS78|B4FS78_MAIZE Putative uncharacterized protein OS=Zea m...    57   3e-07
tr|A3C7I5|A3C7I5_ORYSJ Pyruvate kinase OS=Oryza sativa subsp. ja...    52   1e-05
tr|O39628|O39628_GVCP ORF36L (ORF44) OS=Cydia pomonella granulos...    35   1.4  
tr|A9FTD7|A9FTD7_9RHOB Excinuclease ABC subunit B OS=Phaeobacter...    33   7.0  
tr|A9FDV1|A9FDV1_9RHOB Putative uncharacterized protein OS=Phaeo...    33   7.0  
tr|Q648E3|Q648E3_9ARCH Pyruvate kinase OS=uncultured archaeon GZ...    33   7.0  

>tr|B8LM06|B8LM06_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 592

 Score = 80.5 bits (197), Expect = 4e-14
 Identities = 38/49 (77%), Positives = 45/49 (91%)
 Frame = -1

Query: 478 DAEKTFTEALALLQKRGLLKAGEEVALVQSGRTPIWRTESTHHIQVRKV 332
           DAE+TF++AL+LLQK G+LK GE+VALVQSGR PIWR+ESTHHIQVR V
Sbjct: 537 DAEETFSKALSLLQKLGMLKEGEQVALVQSGRQPIWRSESTHHIQVRTV 585


>tr|B8LL33|B8LL33_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 591

 Score = 80.5 bits (197), Expect = 4e-14
 Identities = 38/49 (77%), Positives = 45/49 (91%)
 Frame = -1

Query: 478 DAEKTFTEALALLQKRGLLKAGEEVALVQSGRTPIWRTESTHHIQVRKV 332
           DAE+TF++AL+LLQK G+LK GE+VALVQSGR PIWR+ESTHHIQVR V
Sbjct: 536 DAEETFSKALSLLQKLGMLKEGEQVALVQSGRQPIWRSESTHHIQVRTV 584


>tr|A5BTB0|A5BTB0_VITVI Pyruvate kinase OS=Vitis vinifera
           GN=VITISV_007675 PE=3 SV=1
          Length = 580

 Score = 78.2 bits (191), Expect = 2e-13
 Identities = 37/49 (75%), Positives = 44/49 (89%)
 Frame = -1

Query: 478 DAEKTFTEALALLQKRGLLKAGEEVALVQSGRTPIWRTESTHHIQVRKV 332
           DAE+TF  AL+LLQK+G++K GEEVALVQSGR PIWR +STH+IQVRKV
Sbjct: 532 DAEETFANALSLLQKQGMVKEGEEVALVQSGRQPIWRFQSTHNIQVRKV 580


>tr|A9TCR0|A9TCR0_PHYPA Pyruvate kinase OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_169342 PE=3 SV=1
          Length = 596

 Score = 77.8 bits (190), Expect = 2e-13
 Identities = 36/49 (73%), Positives = 44/49 (89%)
 Frame = -1

Query: 478 DAEKTFTEALALLQKRGLLKAGEEVALVQSGRTPIWRTESTHHIQVRKV 332
           DAE+TF  AL++LQK+G+++ GEEVALVQSGR PIWR+E THHIQVRKV
Sbjct: 546 DAEETFVYALSILQKKGMVQDGEEVALVQSGRQPIWRSEYTHHIQVRKV 594


>tr|A7QTR8|A7QTR8_VITVI Pyruvate kinase OS=Vitis vinifera
           GN=GSVIVT00006460001 PE=3 SV=1
          Length = 571

 Score = 77.8 bits (190), Expect = 2e-13
 Identities = 37/49 (75%), Positives = 43/49 (87%)
 Frame = -1

Query: 478 DAEKTFTEALALLQKRGLLKAGEEVALVQSGRTPIWRTESTHHIQVRKV 332
           DAE+TF  AL LLQK+G++K GEEVALVQSGR PIWR +STH+IQVRKV
Sbjct: 523 DAEETFANALTLLQKQGMVKEGEEVALVQSGRQPIWRFQSTHNIQVRKV 571


>tr|Q0JKP1|Q0JKP1_ORYSJ Pyruvate kinase (Fragment) OS=Oryza sativa
           subsp. japonica GN=Os01g0660300 PE=3 SV=1
          Length = 367

 Score = 75.9 bits (185), Expect = 9e-13
 Identities = 36/49 (73%), Positives = 43/49 (87%)
 Frame = -1

Query: 478 DAEKTFTEALALLQKRGLLKAGEEVALVQSGRTPIWRTESTHHIQVRKV 332
           DAEKTF +AL+ L K G++K GEEVALVQSGR PIWR++STH+IQVRKV
Sbjct: 319 DAEKTFGDALSYLLKHGMVKEGEEVALVQSGRQPIWRSQSTHNIQVRKV 367


>tr|B8ACE9|B8ACE9_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04452 PE=4 SV=1
          Length = 606

 Score = 75.9 bits (185), Expect = 9e-13
 Identities = 36/49 (73%), Positives = 43/49 (87%)
 Frame = -1

Query: 478 DAEKTFTEALALLQKRGLLKAGEEVALVQSGRTPIWRTESTHHIQVRKV 332
           DAEKTF +AL+ L K G++K GEEVALVQSGR PIWR++STH+IQVRKV
Sbjct: 558 DAEKTFGDALSYLLKHGMVKEGEEVALVQSGRQPIWRSQSTHNIQVRKV 606


>tr|A7PC98|A7PC98_VITVI Pyruvate kinase OS=Vitis vinifera
           GN=GSVIVT00015775001 PE=3 SV=1
          Length = 475

 Score = 75.9 bits (185), Expect = 9e-13
 Identities = 35/51 (68%), Positives = 41/51 (80%)
 Frame = -1

Query: 478 DAEKTFTEALALLQKRGLLKAGEEVALVQSGRTPIWRTESTHHIQVRKVSG 326
           DAE+TF+ AL++L  +GL+K GE V LVQSG  PIWR ESTHHIQVRKV G
Sbjct: 425 DAEETFSRALSILVNKGLMKEGEHVTLVQSGAQPIWRVESTHHIQVRKVQG 475


>tr|A5C814|A5C814_VITVI Pyruvate kinase OS=Vitis vinifera
           GN=VITISV_026381 PE=3 SV=1
          Length = 621

 Score = 75.9 bits (185), Expect = 9e-13
 Identities = 35/51 (68%), Positives = 41/51 (80%)
 Frame = -1

Query: 478 DAEKTFTEALALLQKRGLLKAGEEVALVQSGRTPIWRTESTHHIQVRKVSG 326
           DAE+TF+ AL++L  +GL+K GE V LVQSG  PIWR ESTHHIQVRKV G
Sbjct: 571 DAEETFSRALSILVNKGLMKEGEHVTLVQSGAQPIWRVESTHHIQVRKVQG 621


>tr|A9TTX1|A9TTX1_PHYPA Pyruvate kinase OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_108784 PE=3 SV=1
          Length = 591

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 34/49 (69%), Positives = 44/49 (89%)
 Frame = -1

Query: 478 DAEKTFTEALALLQKRGLLKAGEEVALVQSGRTPIWRTESTHHIQVRKV 332
           DAE+TF  AL++LQK+G+++ GEEVALVQSG+ PIWR+E +HHIQVRKV
Sbjct: 541 DAEETFNYALSILQKKGMVQDGEEVALVQSGKQPIWRSEYSHHIQVRKV 589