BP914494 |
Clone id |
YMU001_000059_E07 |
Library |
YMU01 |
Length |
542 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000059_E07. |
Accession |
BP914494 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1446Contig1 |
Sequence |
GGTGTAAGCAGCTGGAACTTTGATATAGAAGATCTAAAAGCACAAGCTGCATCTATGCAG GATGATGATGGTTGCTTCGGAGGAAAAGAAGAGCCCGATCTTACAGATGCACACAGCAAA GGCTTGCCAGGAATACAGTCAAGCTTCTCTCAGGATAGCTTAGAAGAAGCTAATCCATCT GGTCCTCCAATACACCCTATTAGTATAGAACCTACCGCTGATGTGGGAGGGCGTGTCTCA ATACGGCAATCTGGTAGGCTGCCAAGCTCTCTTGAGTTTAAATCAGAAGAACTAGTGAAA GCATTGGAAGTACCTGAGGATGAGTTGGTTCAGCAAGAGCTTAAAGCGATGGATCTTATC GGTCGAGATCATGGGGCTTCTGAAGTGCCAGAACCACATGGGAGGGATGATAGAGGGGAG TCTAAACAATCTGTTAAAGTACCTCAAAAGCTGGAGGGTCGAGACTTGAGATTAGAAAAG ACCCAGCAAGAGGGCCGTCGAGCTTCAAGTGGGCCCTTGGTGTCTGAATACGTTCTTGCT GG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8WUX9 |
Definition |
sp|Q8WUX9|CHMP7_HUMAN Charged multivesicular body protein 7 OS=Homo sapiens |
Align length |
135 |
Score (bit) |
36.2 |
E-value |
0.11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PM90 |
Definition |
tr|A7PM90|A7PM90_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
191 |
Score (bit) |
45.4 |
E-value |
0.002 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914494|Adiantum capillus-veneris mRNA, clone: YMU001_000059_E07. (542 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PM90|A7PM90_VITVI Chromosome chr14 scaffold_21, whole genom... 45 0.002 tr|A7L4B0|A7L4B0_CARPA Protein kinase OS=Carica papaya PE=4 SV=1 45 0.002 tr|A7QJ71|A7QJ71_VITVI Chromosome chr2 scaffold_105, whole genom... 45 0.003 tr|A5BLX5|A5BLX5_VITVI Putative uncharacterized protein OS=Vitis... 45 0.003 tr|Q10SQ6|Q10SQ6_ORYSJ Os03g0114300 protein OS=Oryza sativa subs... 43 0.012 tr|B8ALY6|B8ALY6_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.012 tr|Q9LER4|Q9LER4_ARATH Protein kinase-like protein OS=Arabidopsi... 42 0.027 tr|Q8VYZ4|Q8VYZ4_ARATH Putative uncharacterized protein At5g1472... 42 0.027 tr|Q84WU5|Q84WU5_ARATH Putative uncharacterized protein At5g1472... 42 0.027 tr|B6U6J4|B6U6J4_MAIZE ATP binding protein OS=Zea mays PE=2 SV=1 42 0.027 tr|Q8W2Y7|Q8W2Y7_ORYSA Putative Ste-20 related kinase, 3'-partia... 41 0.036 tr|Q8RWU9|Q8RWU9_ARATH Putative uncharacterized protein At4g2410... 41 0.036 tr|Q337B2|Q337B2_ORYSJ Os10g0518800 protein OS=Oryza sativa subs... 41 0.036 tr|Q109E3|Q109E3_ORYSJ Protein kinase domain containing protein,... 41 0.036 tr|B8BHW3|B8BHW3_ORYSI Putative uncharacterized protein OS=Oryza... 41 0.036 tr|B4FBG9|B4FBG9_MAIZE Putative uncharacterized protein OS=Zea m... 41 0.036 tr|Q9M0N3|Q9M0N3_ARATH Putative uncharacterized protein AT4g1073... 41 0.046 tr|O82489|O82489_ARATH T12H20.4 protein OS=Arabidopsis thaliana ... 41 0.046 tr|A8IFI7|A8IFI7_CHLRE Predicted protein (Fragment) OS=Chlamydom... 40 0.079 tr|Q6ETL7|Q6ETL7_ORYSJ Putative oxidative-stress responsive 1 OS... 40 0.10 tr|A3A3S1|A3A3S1_ORYSJ Putative uncharacterized protein OS=Oryza... 40 0.10 tr|A2X1L1|A2X1L1_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.10 tr|B1Q2L9|B1Q2L9_ONCMY Otolith matrix macromolecule-64 OS=Oncorh... 39 0.18 tr|A4S6L9|A4S6L9_OSTLU Predicted protein (Fragment) OS=Ostreococ... 39 0.18 tr|A9SAP6|A9SAP6_PHYPA Predicted protein OS=Physcomitrella paten... 38 0.30 tr|Q7X9J3|Q7X9J3_WHEAT Ste20-related protein (Fragment) OS=Triti... 37 0.51 tr|Q00WY0|Q00WY0_OSTTA Putative MAP4K alpha1 (ISS) OS=Ostreococc... 37 0.51 tr|B3MZ61|B3MZ61_DROAN GF21898 OS=Drosophila ananassae GN=GF2189... 37 0.51 tr|A3JZ18|A3JZ18_9RHOB Ribonuclease, Rne/Rng family protein OS=S... 37 0.67 tr|Q9SU46|Q9SU46_ARATH Putative uncharacterized protein AT4g2410... 37 0.67
>tr|A7PM90|A7PM90_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020728001 PE=4 SV=1 Length = 679
Score = 45.4 bits (106), Expect = 0.002 Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 17/191 (8%) Frame = +1
Query: 1 GVSSWNFDIEDLKAQAASMQDDDGCFGGKEEPDLTDA---HSKGLP-------GIQSSFS 150 G+S+WNF++EDLK QAA +QD D ++PD ++A H LP G ++ Sbjct: 331 GISAWNFNLEDLKNQAALIQDYD-VISNVDDPDCSNAAPSHEVSLPMLKLSPHGSSTAVL 389
Query: 151 QDSLEEANPSGPPIHPISIEPTADVGGRVSIRQSGRLPSSLEFKSEELVKALEVPEDELV 330 D L + + + I+P + G + + SSL ++ ++ E + V Sbjct: 390 WDGLNDLSNLENSLASFPIQPLQALKGYFDVCEDDGNASSLSWRDVMQSES----EQQSV 445
Query: 331 QQELKAMDLIGRDHGAS-----EVPEPHGRDDRGESKQ-SVKVPQKLEG-RDLRLEKTQQ 489 QE + D G + G S ++ H + G Q + P+K+ G D +++ Sbjct: 446 DQEAEKDD--GENFGRSSSLPRQIIPGHKKFFSGSLLQDNALSPKKVNGDGDRENIQSRY 503
Query: 490 EGRRASSGPLV 522 + R SGPL+ Sbjct: 504 QPERNYSGPLL 514
>tr|A7L4B0|A7L4B0_CARPA Protein kinase OS=Carica papaya PE=4 SV=1 Length = 684
Score = 45.4 bits (106), Expect = 0.002 Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 26/127 (20%) Frame = +1
Query: 1 GVSSWNFDIEDLKAQAASMQDDDGCFGGKEEPDL-----TDAHSKGLPGIQSSFSQDSLE 165 G+S+WNF++EDLK QAA +QD+D EEPD+ + H LP +SS + ++ Sbjct: 333 GISAWNFNLEDLKCQAALIQDND-VMPNAEEPDVGRKESSRYHEFVLPAERSSPERANIS 391
Query: 166 ----------------EANPSGPPIHPI-SIEPTADVG----GRVSIRQSGRLPSSLEFK 282 E++ + PI P+ +++ DVG G S G P+ L+ + Sbjct: 392 ATAHHLEDGLNDLRDLESSLASFPIKPLQALKGCFDVGEDDDGATSPSWKGTAPAPLDSR 451
Query: 283 SEELVKA 303 + L K+ Sbjct: 452 QQILTKS 458
>tr|A7QJ71|A7QJ71_VITVI Chromosome chr2 scaffold_105, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000530001 PE=4 SV=1 Length = 637
Score = 44.7 bits (104), Expect = 0.003 Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 29/203 (14%) Frame = +1
Query: 1 GVSSWNFDIEDLKAQAASMQDDDGCFGGKEE----------PDLTDAHSKGLPGIQSS-- 144 GVS+WNFDIEDLK QA+ +QDDD +EE D +D+ S I ++ Sbjct: 243 GVSAWNFDIEDLKVQASLVQDDDEIQEMREEDESMKSFVIDKDSSDSRSSLGKSISTNDN 302
Query: 145 -----FSQDSLEEA---NPSGPPIHPISIEPT--ADVGGRVSIRQSGRLPSSLEFKSEEL 294 + D L +A + G + S+E + +G I + +PS+ Sbjct: 303 FFRGRITGDELAQAECLSKKGKSLRSDSLESSNQEKIGQEKDISSAEMMPST-------- 354
Query: 295 VKALEVPEDELVQQELKAMDLIGRDHGASE----VPEPHGRDDRGES-KQSVKVPQKLEG 459 E ++V + K + GR + V H DRG S ++S Q + Sbjct: 355 ------SEKDMVNAKTKTQMVKGRQTQSGPLMPGVVLSHSLSDRGRSFERSENEIQPI-- 406
Query: 460 RDLRLEKTQQEGRRAS--SGPLV 522 EK +E RRA SGPL+ Sbjct: 407 ----TEKANREVRRAPSFSGPLM 425
>tr|A5BLX5|A5BLX5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039089 PE=4 SV=1 Length = 1077
Score = 44.7 bits (104), Expect = 0.003 Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 29/203 (14%) Frame = +1
Query: 1 GVSSWNFDIEDLKAQAASMQDDDGCFGGKEE----------PDLTDAHSKGLPGIQSS-- 144 GVS+WNFDIEDLK QA+ +QDDD +EE D +D+ S I ++ Sbjct: 454 GVSAWNFDIEDLKVQASLVQDDDEIQEMREEDESMKSFVIDKDSSDSRSSLGKSISTNDN 513
Query: 145 -----FSQDSLEEA---NPSGPPIHPISIEPT--ADVGGRVSIRQSGRLPSSLEFKSEEL 294 + D L +A + G + S+E + +G I + +PS+ Sbjct: 514 FFRGRITGDELAQAECLSKKGKSLRSDSLESSNQEKIGQEKDISSAEMMPST-------- 565
Query: 295 VKALEVPEDELVQQELKAMDLIGRDHGASE----VPEPHGRDDRGES-KQSVKVPQKLEG 459 E ++V + K + GR + V H DRG S ++S Q + Sbjct: 566 ------SEKDMVNAKTKTQMVKGRQTQSGPLMPGVVLSHSLSDRGRSFERSENEIQPI-- 617
Query: 460 RDLRLEKTQQEGRRAS--SGPLV 522 EK +E RRA SGPL+ Sbjct: 618 ----TEKANREVRRAPSFSGPLM 636
>tr|Q10SQ6|Q10SQ6_ORYSJ Os03g0114300 protein OS=Oryza sativa subsp. japonica GN=Os03g0114300 PE=4 SV=1 Length = 741
Score = 42.7 bits (99), Expect = 0.012 Identities = 18/23 (78%), Positives = 21/23 (91%) Frame = +1
Query: 1 GVSSWNFDIEDLKAQAASMQDDD 69 GVS+WNFDIEDLKAQA+ + DDD Sbjct: 349 GVSAWNFDIEDLKAQASLIHDDD 371
>tr|B8ALY6|B8ALY6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_09719 PE=4 SV=1 Length = 744
Score = 42.7 bits (99), Expect = 0.012 Identities = 18/23 (78%), Positives = 21/23 (91%) Frame = +1
Query: 1 GVSSWNFDIEDLKAQAASMQDDD 69 GVS+WNFDIEDLKAQA+ + DDD Sbjct: 349 GVSAWNFDIEDLKAQASLIHDDD 371
>tr|Q9LER4|Q9LER4_ARATH Protein kinase-like protein OS=Arabidopsis thaliana GN=T9L3_20 PE=4 SV=1 Length = 561
Score = 41.6 bits (96), Expect = 0.027 Identities = 19/33 (57%), Positives = 24/33 (72%) Frame = +1
Query: 1 GVSSWNFDIEDLKAQAASMQDDDGCFGGKEEPD 99 G+S+WNF++EDLK QAA + DDD EEPD Sbjct: 340 GISAWNFNLEDLKTQAALISDDDTSHA--EEPD 370
>tr|Q8VYZ4|Q8VYZ4_ARATH Putative uncharacterized protein At5g14720 OS=Arabidopsis thaliana GN=At5g14720 PE=2 SV=1 Length = 674
Score = 41.6 bits (96), Expect = 0.027 Identities = 19/33 (57%), Positives = 24/33 (72%) Frame = +1
Query: 1 GVSSWNFDIEDLKAQAASMQDDDGCFGGKEEPD 99 G+S+WNF++EDLK QAA + DDD EEPD Sbjct: 331 GISAWNFNLEDLKTQAALISDDDTSHA--EEPD 361
>tr|Q84WU5|Q84WU5_ARATH Putative uncharacterized protein At5g14720 OS=Arabidopsis thaliana GN=At5g14720 PE=2 SV=1 Length = 674
Score = 41.6 bits (96), Expect = 0.027 Identities = 19/33 (57%), Positives = 24/33 (72%) Frame = +1
Query: 1 GVSSWNFDIEDLKAQAASMQDDDGCFGGKEEPD 99 G+S+WNF++EDLK QAA + DDD EEPD Sbjct: 331 GISAWNFNLEDLKTQAALISDDDTSHA--EEPD 361
>tr|B6U6J4|B6U6J4_MAIZE ATP binding protein OS=Zea mays PE=2 SV=1 Length = 760
Score = 41.6 bits (96), Expect = 0.027 Identities = 18/23 (78%), Positives = 21/23 (91%) Frame = +1
Query: 1 GVSSWNFDIEDLKAQAASMQDDD 69 GVS+WNFDIEDLKAQA+ + DDD Sbjct: 345 GVSAWNFDIEDLKAQASLICDDD 367
|