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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914499
Clone id YMU001_000059_F01
Library
Length 424
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000059_F01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ACGAGAAAGAGCCCAAGCCAGAAAAGGCATAAAGGCCAACACCTGAAGAGACAGTAAGGG
TTGAGACCACACCAGCTATTTCCACTTAGCCAGAAACTGCTGAGGCATCAAAGCCTCAAG
ATGGCCAAGGAAAAGAACAACCATCCACCTCTACAGTGCCACCAGCACTTACAACACAAT
AAGAAGCAACACAGGACGCTGCAAGCACATCCCAACTAGCAAGACGAGAGGAGTGGTAGT
CCAATGACGAAGTAATTTTACAAGTAAACAACGTATGCAAGTGCAGATGCAAGACATGAT
GGAGAAACTCTGCTCAGAAGCCCTTAACCGCAGTACAAAAGCCAAAGAACTAGAAATGGT
CATCGATGCTCTACAAGGAGAGCTTGACGACAGGATGATTACTATCACCGATCTCCAAAG
GCAA
■■Homology search results ■■ -
sp_hit_id P35749
Definition sp|P35749|MYH11_HUMAN Myosin-11 OS=Homo sapiens
Align length 83
Score (bit) 32.7
E-value 0.61
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914499|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_F01.
         (424 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P35749|MYH11_HUMAN Myosin-11 OS=Homo sapiens GN=MYH11 PE=1 SV=3     33   0.61 
sp|Q8R2Q8|BST2_MOUSE Bone marrow stromal antigen 2 OS=Mus muscul...    32   0.80 
sp|P35748|MYH11_RABIT Myosin-11 OS=Oryctolagus cuniculus GN=MYH1...    32   1.0  
sp|O08638|MYH11_MOUSE Myosin-11 OS=Mus musculus GN=Myh11 PE=1 SV=1     32   1.0  
sp|P75160|CDSA_MYCPN Putative phosphatidate cytidylyltransferase...    31   1.8  
sp|P07936|NEUM_RAT Neuromodulin OS=Rattus norvegicus GN=Gap43 PE...    31   2.3  
sp|P06837|NEUM_MOUSE Neuromodulin OS=Mus musculus GN=Gap43 PE=1 ...    30   3.0  
sp|P59691|SYE_CHLPS Glutamyl-tRNA synthetase (Fragment) OS=Chlam...    30   5.0  
sp|Q5L6T4|SYE_CHLAB Glutamyl-tRNA synthetase OS=Chlamydophila ab...    30   5.0  
sp|Q3LI58|KR211_HUMAN Keratin-associated protein 21-1 OS=Homo sa...    30   5.0  
sp|Q2HJ46|RNF8_BOVIN E3 ubiquitin-protein ligase RNF8 OS=Bos tau...    30   5.2  
sp|Q9D952|EVPL_MOUSE Envoplakin OS=Mus musculus GN=Evpl PE=2 SV=2      30   5.2  
sp|Q92817|EVPL_HUMAN Envoplakin OS=Homo sapiens GN=EVPL PE=1 SV=2      29   6.8  
sp|Q80TI1|PKHH1_MOUSE Pleckstrin homology domain-containing fami...    29   8.8  

>sp|P35749|MYH11_HUMAN Myosin-11 OS=Homo sapiens GN=MYH11 PE=1 SV=3
          Length = 1972

 Score = 32.7 bits (73), Expect = 0.61
 Identities = 21/83 (25%), Positives = 41/83 (49%)
 Frame = +2

Query: 173  NTIRSNTGRCKHIPTSKTRGVVVQ*RSNFTSKQRMQVQMQDMMEKLCSEALNRSTKAKEL 352
            N + S TG       ++  G  ++   +  S        Q+++++   + LN STK ++L
Sbjct: 1287 NEVESVTGML-----NEAEGKAIKLAKDVASLSSQLQDTQELLQEETRQKLNVSTKLRQL 1341

Query: 353  EMVIDALQGELDDRMITITDLQR 421
            E   ++LQ +LD+ M    +L+R
Sbjct: 1342 EEERNSLQDQLDEEMEAKQNLER 1364


>sp|Q8R2Q8|BST2_MOUSE Bone marrow stromal antigen 2 OS=Mus musculus
           GN=Bst2 PE=1 SV=1
          Length = 172

 Score = 32.3 bits (72), Expect = 0.80
 Identities = 20/71 (28%), Positives = 35/71 (49%)
 Frame = +2

Query: 188 NTGRCKHIPTSKTRGVVVQ*RSNFTSKQRMQVQMQDMMEKLCSEALNRSTKAKELEMVID 367
           NT        ++T+  ++Q  +   S     V +Q+ +EK  S+AL +  + KELE  + 
Sbjct: 70  NTTHLLQRQLTRTQDSLLQAETQANSCNLTVVTLQESLEKKVSQALEQQARIKELENEVT 129

Query: 368 ALQGELDDRMI 400
            L  EL++  I
Sbjct: 130 KLNQELENLRI 140


>sp|P35748|MYH11_RABIT Myosin-11 OS=Oryctolagus cuniculus GN=MYH11
            PE=2 SV=2
          Length = 1972

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 22/83 (26%), Positives = 40/83 (48%)
 Frame = +2

Query: 173  NTIRSNTGRCKHIPTSKTRGVVVQ*RSNFTSKQRMQVQMQDMMEKLCSEALNRSTKAKEL 352
            N + S TG       S+  G  ++      S        Q+++++   + LN STK ++L
Sbjct: 1287 NEVESVTGML-----SEAEGKAIKLAKEVASLGSQLQDTQELLQEETRQKLNVSTKLRQL 1341

Query: 353  EMVIDALQGELDDRMITITDLQR 421
            E   ++LQ +LD+ M    +L+R
Sbjct: 1342 EDERNSLQEQLDEEMEAKQNLER 1364


>sp|O08638|MYH11_MOUSE Myosin-11 OS=Mus musculus GN=Myh11 PE=1 SV=1
          Length = 1972

 Score = 32.0 bits (71), Expect = 1.0
 Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
 Frame = +2

Query: 284  QMQDMMEKLCSEA---LNRSTKAKELEMVIDALQGELDDRMITITDLQR 421
            Q+QD  E L  E    LN STK ++LE   ++LQ +LD+ M    +L+R
Sbjct: 1316 QLQDTQELLQEETRQKLNVSTKLRQLEDERNSLQDQLDEEMEAKQNLER 1364


>sp|P75160|CDSA_MYCPN Putative phosphatidate cytidylyltransferase
           OS=Mycoplasma pneumoniae GN=cdsA PE=3 SV=1
          Length = 395

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
 Frame = -2

Query: 333 LRLRASEQ---SFSIMSCICTCIRCLLVKLLRHWTTTPLVLLVGMC 205
           +++R S Q   S   + C   CI  +   ++R WTT  L++ +G+C
Sbjct: 168 IKIRPSLQVIYSLGAVICFIACIGTIYFSVIRGWTTIFLLIAIGVC 213


>sp|P07936|NEUM_RAT Neuromodulin OS=Rattus norvegicus GN=Gap43 PE=1
           SV=1
          Length = 226

 Score = 30.8 bits (68), Expect = 2.3
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +3

Query: 93  ETAEASKPQDGQGKEQPSTSTVPPALT---TQ*EATQDAASTSQ 215
           + + +SK +DG  KE+P  + VP A+T       A +DAA  +Q
Sbjct: 140 DNSPSSKAEDGPAKEEPKQADVPAAVTDAAATTPAAEDAAKAAQ 183


>sp|P06837|NEUM_MOUSE Neuromodulin OS=Mus musculus GN=Gap43 PE=1
           SV=1
          Length = 227

 Score = 30.4 bits (67), Expect = 3.0
 Identities = 16/43 (37%), Positives = 25/43 (58%)
 Frame = +3

Query: 93  ETAEASKPQDGQGKEQPSTSTVPPALTTQ*EATQDAASTSQLA 221
           + + +SK +DG  KE+P  + VP A+T       DAA+T+  A
Sbjct: 140 DNSPSSKAEDGPAKEEPKQADVPAAVT-------DAAATTPAA 175


>sp|P59691|SYE_CHLPS Glutamyl-tRNA synthetase (Fragment)
           OS=Chlamydia psittaci GN=gltX PE=3 SV=1
          Length = 368

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 189 TQDAASTSQLARREEW*SNDEVILQVNNVCKCRCKT 296
           T + +S S LA+ ++W  NDE  L++  +C+ R  T
Sbjct: 329 THEKSSESLLAKLKDWLINDEFFLKILPLCQSRITT 364


>sp|Q5L6T4|SYE_CHLAB Glutamyl-tRNA synthetase OS=Chlamydophila
           abortus GN=gltX PE=3 SV=1
          Length = 505

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 189 TQDAASTSQLARREEW*SNDEVILQVNNVCKCRCKT 296
           T + +S S LA+ ++W  NDE  L++  +C+ R  T
Sbjct: 329 THERSSESLLAKLKDWLINDEFFLKILPLCQSRITT 364


>sp|Q3LI58|KR211_HUMAN Keratin-associated protein 21-1 OS=Homo
           sapiens GN=KRTAP21-1 PE=2 SV=1
          Length = 79

 Score = 29.6 bits (65), Expect = 5.0
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 86  SGNSWCGLNPYCLFRCWPLC 27
           SG+ +CG  P+C  RC+  C
Sbjct: 60  SGSGYCGYRPFCFRRCYSSC 79
tr_hit_id Q7RRH2
Definition tr|Q7RRH2|Q7RRH2_PLAYO Putative uncharacterized protein PY00748 (Fragment) OS=Plasmodium yoelii yoelii
Align length 47
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914499|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_F01.
         (424 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7RRH2|Q7RRH2_PLAYO Putative uncharacterized protein PY00748 ...    35   1.4  
tr|A6DJZ8|A6DJZ8_9BACT Putative uncharacterized protein OS=Lenti...    35   2.4  
tr|A9LME9|A9LME9_9BACU Putative uncharacterized protein OS=Penae...    34   4.1  
tr|A0Y0S4|A0Y0S4_9GAMM Transcriptional Regulator, MerR family pr...    33   9.1  
tr|A4HEY2|A4HEY2_LEIBR Putative uncharacterized protein OS=Leish...    33   9.1  
tr|A0BJN6|A0BJN6_PARTE Chromosome undetermined scaffold_110, who...    33   9.1  
tr|Q7Z7R0|Q7Z7R0_HUMAN Smooth muscle myosin heavy chain (Fragmen...    33   9.1  
tr|Q3MNF1|Q3MNF1_HUMAN Smooth muscle myosin heavy chain isoform ...    33   9.1  
tr|Q3MNF0|Q3MNF0_HUMAN Myosin, heavy chain 11, smooth muscle OS=...    33   9.1  
tr|Q3MIV8|Q3MIV8_HUMAN Myosin, heavy chain 11, smooth muscle OS=...    33   9.1  
tr|B1PS43|B1PS43_HUMAN Myosin heavy chain 11 smooth muscle isofo...    33   9.1  
tr|B4P6R9|B4P6R9_DROYA GE11749 OS=Drosophila yakuba GN=GE11749 P...    33   9.2  

>tr|Q7RRH2|Q7RRH2_PLAYO Putative uncharacterized protein PY00748
           (Fragment) OS=Plasmodium yoelii yoelii GN=PY00748 PE=4
           SV=1
          Length = 748

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
 Frame = +3

Query: 90  PETAEASKPQDGQGKEQPSTSTVPPALT-TQ*EATQDAASTSQLARR 227
           P +++   PQD   K+ PS S++PP+LT +  + T    S+S+L+++
Sbjct: 351 PSSSQEDLPQDNSSKDNPSQSSLPPSLTLSSDKKTNTLQSSSELSKK 397


>tr|A6DJZ8|A6DJZ8_9BACT Putative uncharacterized protein
           OS=Lentisphaera araneosa HTCC2155 GN=LNTAR_12736 PE=4
           SV=1
          Length = 197

 Score = 34.7 bits (78), Expect = 2.4
 Identities = 16/42 (38%), Positives = 25/42 (59%)
 Frame = +2

Query: 293 DMMEKLCSEALNRSTKAKELEMVIDALQGELDDRMITITDLQ 418
           ++ EK C   L   T+ K+LE  + AL+GEL+    T+T L+
Sbjct: 21  ELWEKACGGKLIEDTQVKDLEGKVGALEGELNSEKNTVTQLK 62


>tr|A9LME9|A9LME9_9BACU Putative uncharacterized protein OS=Penaeus
           monodon nucleopolyhedrovirus PE=4 SV=1
          Length = 306

 Score = 33.9 bits (76), Expect = 4.1
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +3

Query: 258 LQVNNVCKCRCKT*WRNSAQKPLTAVQKPKN*KWSSMLYKE 380
           L++N VC    KT    S +KP+ +V++  N  W  + YKE
Sbjct: 136 LRINEVCSITMKTLQELSEKKPVVSVKRKNNTDWQVVYYKE 176


>tr|A0Y0S4|A0Y0S4_9GAMM Transcriptional Regulator, MerR family
           protein OS=Alteromonadales bacterium TW-7 GN=ATW7_01922
           PE=4 SV=1
          Length = 153

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 23/98 (23%), Positives = 44/98 (44%)
 Frame = +2

Query: 104 GIKASRWPRKRTTIHLYSATSTYNTIRSNTGRCKHIPTSKTRGVVVQ*RSNFTSKQRMQV 283
           G  A R   K +T+H Y       + R++  + ++ P    R  V++      + Q M +
Sbjct: 16  GYVAKRSGVKVSTLHFYETKHLIKSWRNSGNQRRYKPDVLRRVAVIK------AAQAMGI 69

Query: 284 QMQDMMEKLCSEALNRSTKAKELEMVIDALQGELDDRM 397
            + D+ + L S   NR+   K+   +    Q +LD+R+
Sbjct: 70  SLDDIKQTLASLPDNRTPTKKDWSALSKRWQAQLDERI 107


>tr|A4HEY2|A4HEY2_LEIBR Putative uncharacterized protein
           OS=Leishmania braziliensis GN=LbrM26_V2.1290 PE=4 SV=1
          Length = 866

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 18/54 (33%), Positives = 28/54 (51%)
 Frame = +2

Query: 71  TSYFHLARNC*GIKASRWPRKRTTIHLYSATSTYNTIRSNTGRCKHIPTSKTRG 232
           T Y+  A    G+  ++  R+RTT    S++S  + ++S   RC  I TS  RG
Sbjct: 563 TPYYRGAPASAGVGGAQGSRRRTTTSSASSSSLPDYLKSGKARCSPIATSSCRG 616


>tr|A0BJN6|A0BJN6_PARTE Chromosome undetermined scaffold_110, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00029381001 PE=4 SV=1
          Length = 981

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 17/67 (25%), Positives = 32/67 (47%)
 Frame = +2

Query: 218 SKTRGVVVQ*RSNFTSKQRMQVQMQDMMEKLCSEALNRSTKAKELEMVIDALQGELDDRM 397
           S+ R  + +  S +T+ +    Q Q  +++L     N   +   L  +ID +Q E+DD  
Sbjct: 352 SELRNTIDEWTSKYTNLENQYRQAQSEIDRLNGVVRNLDDEINRLRQIIDQMQREIDDWR 411

Query: 398 ITITDLQ 418
           +   DL+
Sbjct: 412 LKYGDLE 418


>tr|Q7Z7R0|Q7Z7R0_HUMAN Smooth muscle myosin heavy chain (Fragment)
           OS=Homo sapiens PE=2 SV=1
          Length = 1052

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 21/83 (25%), Positives = 41/83 (49%)
 Frame = +2

Query: 173 NTIRSNTGRCKHIPTSKTRGVVVQ*RSNFTSKQRMQVQMQDMMEKLCSEALNRSTKAKEL 352
           N + S TG       ++  G  ++   +  S        Q+++++   + LN STK ++L
Sbjct: 401 NEVESVTGML-----NEAEGKAIKLAKDVASLSSQLQDTQELLQEETRQKLNVSTKLRQL 455

Query: 353 EMVIDALQGELDDRMITITDLQR 421
           E   ++LQ +LD+ M    +L+R
Sbjct: 456 EEERNSLQDQLDEEMEAKQNLER 478


>tr|Q3MNF1|Q3MNF1_HUMAN Smooth muscle myosin heavy chain isoform SM1
            OS=Homo sapiens GN=MYH11 PE=2 SV=1
          Length = 1979

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 21/83 (25%), Positives = 41/83 (49%)
 Frame = +2

Query: 173  NTIRSNTGRCKHIPTSKTRGVVVQ*RSNFTSKQRMQVQMQDMMEKLCSEALNRSTKAKEL 352
            N + S TG       ++  G  ++   +  S        Q+++++   + LN STK ++L
Sbjct: 1294 NEVESVTGML-----NEAEGKAIKLAKDVASLSSQLQDTQELLQEETRQKLNVSTKLRQL 1348

Query: 353  EMVIDALQGELDDRMITITDLQR 421
            E   ++LQ +LD+ M    +L+R
Sbjct: 1349 EEERNSLQDQLDEEMEAKQNLER 1371


>tr|Q3MNF0|Q3MNF0_HUMAN Myosin, heavy chain 11, smooth muscle OS=Homo
            sapiens GN=MYH11 PE=2 SV=1
          Length = 1945

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 21/83 (25%), Positives = 41/83 (49%)
 Frame = +2

Query: 173  NTIRSNTGRCKHIPTSKTRGVVVQ*RSNFTSKQRMQVQMQDMMEKLCSEALNRSTKAKEL 352
            N + S TG       ++  G  ++   +  S        Q+++++   + LN STK ++L
Sbjct: 1294 NEVESVTGML-----NEAEGKAIKLAKDVASLSSQLQDTQELLQEETRQKLNVSTKLRQL 1348

Query: 353  EMVIDALQGELDDRMITITDLQR 421
            E   ++LQ +LD+ M    +L+R
Sbjct: 1349 EEERNSLQDQLDEEMEAKQNLER 1371


>tr|Q3MIV8|Q3MIV8_HUMAN Myosin, heavy chain 11, smooth muscle OS=Homo
            sapiens GN=MYH11 PE=2 SV=1
          Length = 1938

 Score = 32.7 bits (73), Expect = 9.1
 Identities = 21/83 (25%), Positives = 41/83 (49%)
 Frame = +2

Query: 173  NTIRSNTGRCKHIPTSKTRGVVVQ*RSNFTSKQRMQVQMQDMMEKLCSEALNRSTKAKEL 352
            N + S TG       ++  G  ++   +  S        Q+++++   + LN STK ++L
Sbjct: 1287 NEVESVTGML-----NEAEGKAIKLAKDVASLSSQLQDTQELLQEETRQKLNVSTKLRQL 1341

Query: 353  EMVIDALQGELDDRMITITDLQR 421
            E   ++LQ +LD+ M    +L+R
Sbjct: 1342 EEERNSLQDQLDEEMEAKQNLER 1364