BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914504|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_F06.
         (528 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A0M3M1|RECR_GRAFK Recombination protein recR OS=Gramella fors...    32   1.9  
sp|A6TG19|MDTL_KLEP7 Multidrug resistance protein mdtL OS=Klebsi...    32   1.9  
sp|Q92F41|Y266_LISIN Uncharacterized protein Lin0266 OS=Listeria...    31   3.2  
sp|Q48762|Y234_LISMO Uncharacterized protein Lmo0234 OS=Listeria...    31   3.2  
sp|Q045P6|SYA_LACGA Alanyl-tRNA synthetase OS=Lactobacillus gass...    30   5.4  
sp|Q8CHW4|EI2BE_MOUSE Translation initiation factor eIF-2B subun...    30   7.1  
sp|Q54NP0|Y6352_DICDI Putative uncharacterized protein DDB_G0285...    30   9.2  
sp|O64597|FB83_ARATH Putative F-box protein At1g70390 OS=Arabido...    30   9.2  

>sp|A0M3M1|RECR_GRAFK Recombination protein recR OS=Gramella
           forsetii (strain KT0803) GN=recR PE=3 SV=1
          Length = 205

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 14/42 (33%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +3

Query: 162 QPDDLMDQIEDP--RLRENRRISNTKFSLSSPEICQITTNPS 281
           QP++   Q+      LR+N ++ N  +++S  E+C+I  NPS
Sbjct: 36  QPEEQTTQLSKALLELRQNIKLCNNCYNISDTELCEICANPS 77


>sp|A6TG19|MDTL_KLEP7 Multidrug resistance protein mdtL
           OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC
           700721 / MGH 78578) GN=mdtL PE=3 SV=1
          Length = 392

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 21/72 (29%), Positives = 33/72 (45%)
 Frame = -3

Query: 511 LLVLGYICYAMVFLFSIAEILIISTFSLLSCVFNDETSFRNA*ICSSSLHIWTSSKVPLV 332
           L+ LG IC      F +A    +  F+L + V +       A +C SSL IW ++ + L 
Sbjct: 296 LIGLGMICAGFSVGFGVAMSQALGPFTLRAGVASSVLGI--AQVCGSSLWIWLAAIIGLS 353

Query: 331 AFNCIFLSAVCC 296
           A N +    + C
Sbjct: 354 AMNMLIGILIAC 365


>sp|Q92F41|Y266_LISIN Uncharacterized protein Lin0266 OS=Listeria
           innocua GN=lin0266 PE=3 SV=1
          Length = 357

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = +2

Query: 302 NRAQKD---AIESYQGDLARCPDMQTRGADLSVAEGGLIVENXXXXXECANNQN 454
           NR QK+    +E Y+GD    P++ ++   L+   GG++V N     +    QN
Sbjct: 223 NRIQKEDSIQVEMYEGDFEDTPEVDSKLVKLAKVMGGIVVTNDYNLNKVCEFQN 276


>sp|Q48762|Y234_LISMO Uncharacterized protein Lmo0234 OS=Listeria
           monocytogenes GN=lmo0234 PE=3 SV=1
          Length = 357

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = +2

Query: 302 NRAQKD---AIESYQGDLARCPDMQTRGADLSVAEGGLIVENXXXXXECANNQN 454
           NR QK+    +E Y+GD    P++ ++   L+   GG++V N     +    QN
Sbjct: 223 NRIQKEDAIQVEMYEGDFEDTPEVDSKLVKLAKVMGGIVVTNDYNLNKVCEFQN 276


>sp|Q045P6|SYA_LACGA Alanyl-tRNA synthetase OS=Lactobacillus gasseri
           (strain ATCC 33323 / DSM 20243) GN=alaS PE=3 SV=1
          Length = 882

 Score = 30.4 bits (67), Expect = 5.4
 Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
 Frame = +3

Query: 309 LKKMQ--LKATKGTLLDVQICRLEEQI*ALRKEVSSLKTQLNR 431
           LK++Q  +KATK   +  +I  LEE + A +KE   LK Q+N+
Sbjct: 718 LKEVQDEVKATKAEDVTNKISSLEEDLRASQKEAEQLKAQINK 760


>sp|Q8CHW4|EI2BE_MOUSE Translation initiation factor eIF-2B subunit
           epsilon OS=Mus musculus GN=Eif2b5 PE=1 SV=1
          Length = 717

 Score = 30.0 bits (66), Expect = 7.1
 Identities = 14/48 (29%), Positives = 24/48 (50%)
 Frame = +3

Query: 84  QQLHDSVWQTMERVEESSFLMTPGETQPDDLMDQIEDPRLRENRRISN 227
           ++L  S+W  M + EE S   + G   P++L  +   P+L + R   N
Sbjct: 504 EELRQSLWGLMIKTEEESETESEGSVDPEELDSRAGSPQLDDIRVFQN 551


>sp|Q54NP0|Y6352_DICDI Putative uncharacterized protein DDB_G0285119
           OS=Dictyostelium discoideum GN=DDB_G0285119 PE=4 SV=1
          Length = 521

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 22/98 (22%), Positives = 41/98 (41%)
 Frame = +3

Query: 90  LHDSVWQTMERVEESSFLMTPGETQPDDLMDQIEDPRLRENRRISNTKFSLSSPEICQIT 269
           L + VW T   + E +++ TP    PD +   ++D    EN  ++N   S S  +  Q  
Sbjct: 390 LKNGVWYTESELLEENYVWTPKYWTPDRIGKWVDDIEFSEN--LTNPSNSNSPNQQAQQQ 447

Query: 270 TNPSVRK**QQTALKKMQLKATKGTLLDVQICRLEEQI 383
                ++  QQ    + Q    + T    Q  + ++Q+
Sbjct: 448 AQQQAQQQQQQAQQTQQQQTQQQTTQQQTQQAQQQQQV 485


>sp|O64597|FB83_ARATH Putative F-box protein At1g70390
           OS=Arabidopsis thaliana GN=At1g70390 PE=4 SV=1
          Length = 332

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
 Frame = -2

Query: 257 YLRRAQTK---LCVANSSIFSKSWVFNLVHKVIRLSFSWCHQK 138
           Y+RR+ T+   L VAN S   KS VF+ +++      S CHQ+
Sbjct: 49  YMRRSMTRPRVLIVANESTGEKSLVFHTLYQEEEPLLSSCHQQ 91

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914504|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_F06.
         (528 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B0R0G8|B0R0G8_DANRE Novel protein (Fragment) OS=Danio rerio G...    34   4.0  
tr|A8RKZ8|A8RKZ8_9CLOT Putative uncharacterized protein OS=Clost...    33   6.7  
tr|B7LPY2|B7LPY2_ESCFE Putative outer membrane lipoprotein OS=Es...    33   8.8  

>tr|B0R0G8|B0R0G8_DANRE Novel protein (Fragment) OS=Danio rerio
           GN=zC14A17.14-001 PE=4 SV=1
          Length = 298

 Score = 34.3 bits (77), Expect = 4.0
 Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 20/137 (14%)
 Frame = +3

Query: 84  QQLHDSVWQTMERVEESSFLMTPGETQPDDLMDQIEDPRLRENRRISNTKFSLS------ 245
           Q L D + Q  E V+ES   +   + + DD +  +E    R+N++++ T+  L       
Sbjct: 139 QDLKDKIRQLEEEVKESKQKLKKLQQESDDQIASLEKQISRKNQQLATTEDKLEQTNAEN 198

Query: 246 ----------SPEICQITT--NPSVRK**QQTAL--KKMQLKATKGTLLDVQICRLEEQI 383
                     + EI +IT   N +++K  ++ A    K+QLK       DV +   +E I
Sbjct: 199 AALIKKLNSLNDEIDKITDEKNNALKKAEKEIAALNDKLQLKDDALAKKDVLLKEKDEYI 258

Query: 384 *ALRKEVSSLKTQLNRL 434
             ++ +  SLK +L R+
Sbjct: 259 NVVKDQRDSLKEELGRV 275


>tr|A8RKZ8|A8RKZ8_9CLOT Putative uncharacterized protein
           OS=Clostridium bolteae ATCC BAA-613 GN=CLOBOL_01460 PE=3
           SV=1
          Length = 296

 Score = 33.5 bits (75), Expect = 6.7
 Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
 Frame = -3

Query: 508 LVLGYICYAMVFLFSIAEI--LIISTFSLLSCVFNDETSFRNA*ICSSSLHI------WT 353
           L  GY+   +  LF++A +  +++++FS    +F+++       +  S  HI      W 
Sbjct: 24  LAPGYLILTLWILFTLALLGWVLLASFSTTKEIFSNK-------LLDSGFHIENYVKAWV 76

Query: 352 SSKVPLVAFNCIFLSAVCC 296
           +S V  + FN +F +AV C
Sbjct: 77  NSNVSTIFFNSLFYAAVSC 95


>tr|B7LPY2|B7LPY2_ESCFE Putative outer membrane lipoprotein
           OS=Escherichia fergusonii GN=yqhH PE=4 SV=1
          Length = 86

 Score = 33.1 bits (74), Expect = 8.8
 Identities = 17/41 (41%), Positives = 26/41 (63%)
 Frame = +3

Query: 315 KMQLKATKGTLLDVQICRLEEQI*ALRKEVSSLKTQLNRLN 437
           K+   AT   LL+ +I RLE+ I ALR ++ + K++ NR N
Sbjct: 25  KVNQLATNVQLLNTKITRLEQDIKALRPQIYAAKSEANRAN 65