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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914507
Clone id YMU001_000059_F09
Library
Length 479
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000059_F09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AATGGAAAAGGGTTTACTTACATCCTGACATACCGCCTTCAACCCAACACCAGCTTCTGC
AGGAGAGATTGTTTGCCGAAATTGCTTCAAGAACTGCATTTGTAGCTCTCACCATGAACT
TTGATGACCATCACCTAAACCATTGAACCATCTCTTTGCTCATCCTCGCAGCAATAATGG
TACCATCTACAACTTTTCTGCAACTGTCAATCTACGCATTGACATCATCCACAATTCAAA
ACCTGCTGCCCAATCCTCTAGATATTCAATACCTGTGCAAATGGAGCCAATGCTTGACTT
TGCTATCTCGGTCAATTTGCAACTGCACTCATTACTTTGACCATTTGCCAATCGTTTGGC
AACTTCAAACTCTGCTTTCAGCTTCTACCACGGAGCATTAGATAGCTCCTCAGTGGGGGC
ACCACTGATGGAAAGGGGGAACAAACCCAAAACACTCCAAATTTGACTCTCTATAGCTC
■■Homology search results ■■ -
sp_hit_id A0KL13
Definition sp|A0KL13|Y2450_AERHH Putative transport protein AHA_2450 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240)
Align length 40
Score (bit) 32.0
E-value 1.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914507|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_F09.
         (479 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A0KL13|Y2450_AERHH Putative transport protein AHA_2450 OS=Aer...    32   1.5  
sp|A4SN85|Y2308_AERS4 Putative transport protein ASA_2308 OS=Aer...    32   1.5  
sp|Q7VKZ4|GLNE_HAEDU Glutamate-ammonia-ligase adenylyltransferas...    29   9.6  
sp|P56161|ACES_ANOST Acetylcholinesterase OS=Anopheles stephensi...    29   9.6  

>sp|A0KL13|Y2450_AERHH Putative transport protein AHA_2450
           OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC
           7966 / NCIB 9240) GN=AHA_2450 PE=3 SV=1
          Length = 561

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 238 KTCCPIL*IFNTCANGANA*LCYLGQFATALITLTICQSF 357
           +TC P + + N  AN +   L Y G +A A + LT+  SF
Sbjct: 516 RTCAPAMDVVNEAANSSIPALGYAGTYAVANVMLTLAGSF 555


>sp|A4SN85|Y2308_AERS4 Putative transport protein ASA_2308
           OS=Aeromonas salmonicida (strain A449) GN=ASA_2308 PE=3
           SV=1
          Length = 561

 Score = 32.0 bits (71), Expect = 1.5
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = +1

Query: 238 KTCCPIL*IFNTCANGANA*LCYLGQFATALITLTICQSF 357
           +TC P + + N  AN +   L Y G +A A + LT+  SF
Sbjct: 516 RTCAPAMDVVNEAANSSIPALGYAGTYAVANVMLTLAGSF 555


>sp|Q7VKZ4|GLNE_HAEDU Glutamate-ammonia-ligase adenylyltransferase
           OS=Haemophilus ducreyi GN=glnE PE=3 SV=1
          Length = 957

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
 Frame = +3

Query: 141 H*TISLLILAAIM--VPSTTFLQLSIYALTSSTIQNLLPNPLDIQYLCKWSQCLTLLSRS 314
           H  I  L LA ++   P  T    +I+ L ++T+Q+    P+ ++     SQ +  +  S
Sbjct: 466 HPEIRQLELAEVLRDYPVATEDYATIFHLLANTLQDWSKRPIGVRGRKVLSQLMPKVMHS 525

Query: 315 ICNCTHYFDHLPIVWQLQTLLSASTT 392
           IC+ T Y   LP +  +   ++  TT
Sbjct: 526 ICSKTDYLVVLPRLLNIIDRVTTRTT 551


>sp|P56161|ACES_ANOST Acetylcholinesterase OS=Anopheles stephensi
           PE=3 SV=1
          Length = 664

 Score = 29.3 bits (64), Expect = 9.6
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = -3

Query: 399 NAPW*KLKAEFEVAKRLANGQSNECSCKLTEIAKS 295
           NAPW  + AE   A ++A G  ++C+C LT + +S
Sbjct: 291 NAPWSHMTAE--KALQIAEGLIDDCNCNLTMLKES 323
tr_hit_id A5AER4
Definition tr|A5AER4|A5AER4_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 50
Score (bit) 39.7
E-value 0.075
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914507|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_F09.
         (479 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5AER4|A5AER4_VITVI Putative uncharacterized protein OS=Vitis...    40   0.075
tr|A5BTH4|A5BTH4_VITVI Putative uncharacterized protein OS=Vitis...    39   0.13 
tr|A5BI36|A5BI36_VITVI Putative uncharacterized protein OS=Vitis...    38   0.29 
tr|A5C9E9|A5C9E9_VITVI Putative uncharacterized protein OS=Vitis...    37   0.37 
tr|A5BVK4|A5BVK4_VITVI Putative uncharacterized protein OS=Vitis...    37   0.37 
tr|A9T5U6|A9T5U6_PHYPA Predicted protein OS=Physcomitrella paten...    37   0.49 
tr|A9SNJ3|A9SNJ3_PHYPA Predicted protein OS=Physcomitrella paten...    37   0.49 
tr|A5BJI5|A5BJI5_VITVI Putative uncharacterized protein OS=Vitis...    37   0.49 
tr|A5ATC3|A5ATC3_VITVI Putative uncharacterized protein OS=Vitis...    37   0.49 
tr|A5AMW9|A5AMW9_VITVI Putative uncharacterized protein OS=Vitis...    37   0.49 
tr|A5AM80|A5AM80_VITVI Putative uncharacterized protein OS=Vitis...    37   0.49 
tr|A9T330|A9T330_PHYPA Predicted protein OS=Physcomitrella paten...    37   0.64 
tr|A5BYJ0|A5BYJ0_VITVI Putative uncharacterized protein OS=Vitis...    37   0.64 
tr|A9TQT8|A9TQT8_PHYPA Predicted protein OS=Physcomitrella paten...    36   0.83 
tr|A9RF97|A9RF97_PHYPA Predicted protein OS=Physcomitrella paten...    36   0.83 
tr|A5BU71|A5BU71_VITVI Putative uncharacterized protein OS=Vitis...    36   0.83 
tr|A5BKR4|A5BKR4_VITVI Putative uncharacterized protein OS=Vitis...    36   0.83 
tr|A5BK51|A5BK51_VITVI Putative uncharacterized protein (Fragmen...    36   0.83 
tr|A5AQX1|A5AQX1_VITVI Putative uncharacterized protein OS=Vitis...    36   0.83 
tr|A5AGD1|A5AGD1_VITVI Putative uncharacterized protein OS=Vitis...    36   0.83 
tr|A9SC18|A9SC18_PHYPA Predicted protein OS=Physcomitrella paten...    36   1.1  
tr|A5CBN7|A5CBN7_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5CBL5|A5CBL5_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5C4Y9|A5C4Y9_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5C4H4|A5C4H4_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5BQS5|A5BQS5_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5BPS7|A5BPS7_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5BJW7|A5BJW7_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5BIJ0|A5BIJ0_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  
tr|A5BB53|A5BB53_VITVI Putative uncharacterized protein OS=Vitis...    36   1.1  

>tr|A5AER4|A5AER4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_031999 PE=4 SV=1
          Length = 1336

 Score = 39.7 bits (91), Expect = 0.075
 Identities = 19/50 (38%), Positives = 28/50 (56%)
 Frame = -3

Query: 228 MMSMRRLTVAEKL*MVPLLLRG*AKRWFNGLGDGHQSSW*ELQMQFLKQF 79
           MM   RL  A  + + P+ L G A+RWF  L    + +W +L  +FL+QF
Sbjct: 147 MMRAHRLDEAHLIMLFPMSLSGAAQRWFASLDASRRRTWDDLAQEFLRQF 196


>tr|A5BTH4|A5BTH4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_000704 PE=4 SV=1
          Length = 703

 Score = 38.9 bits (89), Expect = 0.13
 Identities = 17/50 (34%), Positives = 30/50 (60%)
 Frame = -3

Query: 228 MMSMRRLTVAEKL*MVPLLLRG*AKRWFNGLGDGHQSSW*ELQMQFLKQF 79
           +M   RL  A+ + + P+LL G A+RWF  L    + +W +L  +F++Q+
Sbjct: 109 VMRGHRLDEAQMIMLFPMLLSGAAQRWFASLDPSRRRTWADLGQEFIRQY 158


>tr|A5BI36|A5BI36_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_022503 PE=4 SV=1
          Length = 970

 Score = 37.7 bits (86), Expect = 0.29
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
 Frame = -3

Query: 261 LEDWAAGFELWMMSMRRLTVAEKL*MV---PLLLRG*AKRWFNGLGDGHQSSW*ELQMQF 91
           LED  A  +     MR+L V +   M+   P+ L G A+RWF  L    + +W +L  +F
Sbjct: 7   LEDAHAHMDRLEQRMRQLRVLDGGMMIMLFPMSLSGAAQRWFTSLDVSRRHTWDDLAXEF 66

Query: 90  LKQF 79
           L+QF
Sbjct: 67  LRQF 70


>tr|A5C9E9|A5C9E9_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_023368 PE=4 SV=1
          Length = 246

 Score = 37.4 bits (85), Expect = 0.37
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = -3

Query: 228 MMSMRRLTVAEKL*MVPLLLRG*AKRWFNGLGDGHQSSW*ELQMQFLKQF 79
           +M   RL  A+ + + PL L G A+RWF  L      +W +L  +FL+Q+
Sbjct: 42  IMHKHRLDEAQMIMLFPLSLSGAAQRWFASLDHSRLRTWVDLAHEFLRQY 91


>tr|A5BVK4|A5BVK4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_022217 PE=4 SV=1
          Length = 2168

 Score = 37.4 bits (85), Expect = 0.37
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = -3

Query: 225 MSMRRLTVAEKL*MVPLLLRG*AKRWFNGLGDGHQSSW*ELQMQFLKQF 79
           M  R L   + + + PL L G A+RWF  L    + +W +L  +FL+QF
Sbjct: 1   MRARGLDKPQMITLFPLSLSGAAQRWFASLESSRRRTWDDLAQEFLRQF 49


>tr|A9T5U6|A9T5U6_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_88471 PE=4 SV=1
          Length = 732

 Score = 37.0 bits (84), Expect = 0.49
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = -3

Query: 171 LRG*AKRWFNGLGDGHQSSW*ELQMQFLKQFRQTISPAEAGVGLKAVCQ 25
           L G A  W+    +GH ++W +LQ+ FL  FR  +  + A   L+AV Q
Sbjct: 193 LHGEAYNWYRDHDEGHFTTWSQLQVAFLNHFRPEVGQSTALRALRAVRQ 241


>tr|A9SNJ3|A9SNJ3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_81852 PE=4 SV=1
          Length = 544

 Score = 37.0 bits (84), Expect = 0.49
 Identities = 19/52 (36%), Positives = 28/52 (53%)
 Frame = -3

Query: 180 PLLLRG*AKRWFNGLGDGHQSSW*ELQMQFLKQFRQTISPAEAGVGLKAVCQ 25
           P  L G A  W+    +GH ++W +LQ+ FL  FR+ +  + A   L AV Q
Sbjct: 73  PGTLHGEAYNWYRDHDEGHFTTWSQLQVAFLNHFRREVGQSTALRALGAVRQ 124


>tr|A5BJI5|A5BJI5_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_031730 PE=4 SV=1
          Length = 2196

 Score = 37.0 bits (84), Expect = 0.49
 Identities = 23/75 (30%), Positives = 36/75 (48%)
 Frame = -3

Query: 228 MMSMRRLTVAEKL*MVPLLLRG*AKRWFNGLGDGHQSSW*ELQMQFLKQFRQTISPAEAG 49
           +M    L   + + + PL L G A+RWF  L    + +W +L  +FL+QF   I    + 
Sbjct: 149 VMRAHGLDEPQMITLFPLSLSGAAQRWFASLESSRRRTWDDLAQEFLRQFSFNIVVBVSR 208

Query: 48  VGLKAVCQDVSKPFS 4
             LKA+ Q   +  S
Sbjct: 209 RELKALRQRTEESVS 223


>tr|A5ATC3|A5ATC3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_025308 PE=4 SV=1
          Length = 469

 Score = 37.0 bits (84), Expect = 0.49
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
 Frame = -3

Query: 234 LWMMSMRR--LTVAEKL*MVPLLLRG*AKRWFNGLGDGHQSSW*ELQMQFLKQ 82
           L+ M MR   L  A+ + + P+ L G A+RWF  L   H+ +W +L  +FL+Q
Sbjct: 173 LYSMIMRAHGLDEAKTIMIFPMSLSGAAQRWFASLDVSHRRTWDDLAQEFLRQ 225


>tr|A5AMW9|A5AMW9_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_039898 PE=4 SV=1
          Length = 535

 Score = 37.0 bits (84), Expect = 0.49
 Identities = 17/50 (34%), Positives = 27/50 (54%)
 Frame = -3

Query: 228 MMSMRRLTVAEKL*MVPLLLRG*AKRWFNGLGDGHQSSW*ELQMQFLKQF 79
           +M    L  A+ L + P  L G  +RW+  L   H+ SW +L  +FL+Q+
Sbjct: 93  VMRAHGLDEAQLLTLFPFSLSGVTQRWYASLESSHRRSWTDLAQEFLRQY 142