BP914517 |
Clone id |
YMU001_000059_G07 |
Library |
YMU01 |
Length |
591 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000059_G07. |
Accession |
BP914517 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2239Contig1 |
Sequence |
CTCAATTCAAAACAAGTTGGACTTGGAGAAAGCGATGATGGATTGTTTGTATGCAAAATG TACTCCATGCATTACGGATTGTGTTATGGCCGAGCTAGAAAAGCTTGGACAAAAATATCG GGTTGCTCTTAGAGTTGCGAAGGATCCCAGATTTGAGCAGTTACCTTGCACACACAAAGG AACTTATGCAGATGATTGTATTGTTGATAGAGTTACTCAACATAAATGCTATATAGTGGC TACATGCGATAGGGATCTGAAACGCCATATACGGAAGATACCTGGTGTTCCAATTATGTA CATCACACAACACAGATATTCGATCGAAAGATTGCCAGAAGCAACCATTGGTGGCGCACC TCGAATATGAAGGCAAAGGGTGGAGAGGTTTGATGTCATGGAGAATTGTACCTTGTGCAG ACATGAGTTTGGAGGAGCATTTACATCTATTTTTGGCATCTTTTTCCGGGATGTGAAGCC TTATTTTATAAGGCCGCAAGTTGTTTCCATGCAAGAATGCTGGGCATTGCTAGGTCCAAT TTTGTATCACCCAAAAGTGTAGCAAGCTGAATGATCTCACATGCACAGCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5RFQ0 |
Definition |
sp|Q5RFQ0|FCF1_PONAB rRNA-processing protein FCF1 homolog OS=Pongo abelii |
Align length |
121 |
Score (bit) |
211.0 |
E-value |
3.0e-54 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q5VMX2 |
Definition |
tr|Q5VMX2|Q5VMX2_ORYSJ Os06g0158600 protein OS=Oryza sativa subsp. japonica |
Align length |
122 |
Score (bit) |
243.0 |
E-value |
4.0e-63 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914517|Adiantum capillus-veneris mRNA, clone: YMU001_000059_G07. (591 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q5VMX2|Q5VMX2_ORYSJ Os06g0158600 protein OS=Oryza sativa subs... 243 4e-63 tr|B8B320|B8B320_ORYSI Putative uncharacterized protein OS=Oryza... 243 4e-63 tr|B4FS24|B4FS24_MAIZE Nucleolar protein involved in pre-mRNA pr... 243 4e-63 tr|A9T238|A9T238_PHYPA Predicted protein OS=Physcomitrella paten... 242 1e-62 tr|A9RIF1|A9RIF1_PHYPA Predicted protein OS=Physcomitrella paten... 240 4e-62 tr|A7PZQ1|A7PZQ1_VITVI Chromosome chr15 scaffold_40, whole genom... 236 7e-61 tr|O82346|O82346_ARATH Expressed protein (At2g46230/T3F17.12) OS... 229 7e-59 tr|A3B8K9|A3B8K9_ORYSJ Putative uncharacterized protein OS=Oryza... 228 2e-58 tr|A8J3T9|A8J3T9_CHLRE Predicted protein OS=Chlamydomonas reinha... 216 1e-54 tr|Q4FZ45|Q4FZ45_HUMAN Putative uncharacterized protein DKFZp686... 211 3e-53 tr|Q1RP75|Q1RP75_RAT ZH10 protein OS=Rattus norvegicus GN=RGD131... 209 1e-52 tr|Q568H9|Q568H9_DANRE Zgc:110288 OS=Danio rerio GN=zgc:110288 P... 206 8e-52 tr|Q6NUA5|Q6NUA5_XENLA MGC81107 protein OS=Xenopus laevis GN=MGC... 206 1e-51 tr|Q6DIE8|Q6DIE8_XENTR MGC89599 protein OS=Xenopus tropicalis GN... 206 1e-51 tr|B5X7B1|B5X7B1_SALSA rRNA-processing protein FCF1 homolog OS=S... 205 1e-51 tr|B5X5A6|B5X5A6_SALSA rRNA-processing protein FCF1 homolog OS=S... 205 1e-51 tr|B3S0V1|B3S0V1_TRIAD Putative uncharacterized protein (Fragmen... 205 2e-51 tr|Q4RLT9|Q4RLT9_TETNG Chromosome 10 SCAF15019, whole genome sho... 202 1e-50 tr|A4RYU2|A4RYU2_OSTLU Predicted protein OS=Ostreococcus lucimar... 201 3e-50 tr|B6MED3|B6MED3_BRAFL Putative uncharacterized protein OS=Branc... 201 3e-50 tr|Q66K47|Q66K47_HUMAN FCF1 protein OS=Homo sapiens GN=FCF1 PE=2... 201 3e-50 tr|A9V452|A9V452_MONBE Predicted protein OS=Monosiga brevicollis... 199 1e-49 tr|A8N5S3|A8N5S3_COPC7 Putative uncharacterized protein OS=Copri... 197 4e-49 tr|Q017B9|Q017B9_OSTTA Predicted nucleic-acid-binding protein, c... 197 5e-49 tr|A7SB21|A7SB21_NEMVE Predicted protein OS=Nematostella vectens... 194 3e-48 tr|B7QAJ0|B7QAJ0_IXOSC Putative uncharacterized protein OS=Ixode... 193 7e-48 tr|B0D8P8|B0D8P8_LACBS Predicted protein OS=Laccaria bicolor (st... 191 2e-47 tr|A8PW97|A8PW97_MALGO Putative uncharacterized protein OS=Malas... 190 5e-47 tr|Q5KGF9|Q5KGF9_CRYNE Putative uncharacterized protein OS=Crypt... 189 1e-46 tr|B4MV99|B4MV99_DROWI GK14657 OS=Drosophila willistoni GN=GK146... 188 2e-46
>tr|Q5VMX2|Q5VMX2_ORYSJ Os06g0158600 protein OS=Oryza sativa subsp. japonica GN=P0702F05.21 PE=2 SV=1 Length = 199
Score = 243 bits (621), Expect = 4e-63 Identities = 113/122 (92%), Positives = 119/122 (97%) Frame = +2
Query: 2 SIQNKLDLEKAMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRVAKDPRFEQLPCTHKG 181 SIQNKLDLEK MMDCLYAKCTPCITDCVMAELEKLGQKYRVALR+AKDPRF++L CTHKG Sbjct: 78 SIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFQRLACTHKG 137
Query: 182 TYADDCIVDRVTQHKCYIVATCDRDLKRHIRKIPGVPIMYITQHRYSIERLPEATIGGAP 361 TYADDCIV+RVTQHKCYIVATCDRDLKR IRK+PGVPIMYIT+HRYSIERLPEATIGGAP Sbjct: 138 TYADDCIVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRHRYSIERLPEATIGGAP 197
Query: 362 RI 367 RI Sbjct: 198 RI 199
>tr|B8B320|B8B320_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_21758 PE=4 SV=1 Length = 199
Score = 243 bits (621), Expect = 4e-63 Identities = 113/122 (92%), Positives = 119/122 (97%) Frame = +2
Query: 2 SIQNKLDLEKAMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRVAKDPRFEQLPCTHKG 181 SIQNKLDLEK MMDCLYAKCTPCITDCVMAELEKLGQKYRVALR+AKDPRF++L CTHKG Sbjct: 78 SIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFQRLACTHKG 137
Query: 182 TYADDCIVDRVTQHKCYIVATCDRDLKRHIRKIPGVPIMYITQHRYSIERLPEATIGGAP 361 TYADDCIV+RVTQHKCYIVATCDRDLKR IRK+PGVPIMYIT+HRYSIERLPEATIGGAP Sbjct: 138 TYADDCIVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRHRYSIERLPEATIGGAP 197
Query: 362 RI 367 RI Sbjct: 198 RI 199
>tr|B4FS24|B4FS24_MAIZE Nucleolar protein involved in pre-mRNA processing OS=Zea mays PE=2 SV=1 Length = 199
Score = 243 bits (621), Expect = 4e-63 Identities = 113/122 (92%), Positives = 119/122 (97%) Frame = +2
Query: 2 SIQNKLDLEKAMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRVAKDPRFEQLPCTHKG 181 SIQNKLDLEK MMDCLYAKCTPCITDCVMAELEKLGQKYRVALR+AKDPRF++L CTHKG Sbjct: 78 SIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFQRLACTHKG 137
Query: 182 TYADDCIVDRVTQHKCYIVATCDRDLKRHIRKIPGVPIMYITQHRYSIERLPEATIGGAP 361 TYADDCIV+RVTQHKCYIVATCDRDLKR IRK+PGVPIMYIT+HRYSIERLPEATIGGAP Sbjct: 138 TYADDCIVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRHRYSIERLPEATIGGAP 197
Query: 362 RI 367 RI Sbjct: 198 RI 199
>tr|A9T238|A9T238_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_190857 PE=4 SV=1 Length = 198
Score = 242 bits (617), Expect = 1e-62 Identities = 114/121 (94%), Positives = 119/121 (98%) Frame = +2
Query: 2 SIQNKLDLEKAMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRVAKDPRFEQLPCTHKG 181 SIQNKLDLEKAMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRVAKDPRFE LPCTHKG Sbjct: 77 SIQNKLDLEKAMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRVAKDPRFETLPCTHKG 136
Query: 182 TYADDCIVDRVTQHKCYIVATCDRDLKRHIRKIPGVPIMYITQHRYSIERLPEATIGGAP 361 TYADDCIV+RVT++KCYIVATCDRDLKR IRKIPGVPIMYI+QH+YSIERLPEATIGGAP Sbjct: 137 TYADDCIVERVTRNKCYIVATCDRDLKRRIRKIPGVPIMYISQHQYSIERLPEATIGGAP 196
Query: 362 R 364 R Sbjct: 197 R 197
>tr|A9RIF1|A9RIF1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_104637 PE=4 SV=1 Length = 198
Score = 240 bits (613), Expect = 4e-62 Identities = 113/121 (93%), Positives = 119/121 (98%) Frame = +2
Query: 2 SIQNKLDLEKAMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRVAKDPRFEQLPCTHKG 181 SIQNKLDLEKAMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRVAKDPRFE LPCTHKG Sbjct: 77 SIQNKLDLEKAMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRVAKDPRFETLPCTHKG 136
Query: 182 TYADDCIVDRVTQHKCYIVATCDRDLKRHIRKIPGVPIMYITQHRYSIERLPEATIGGAP 361 TYADDCIV+RVT++KCYIVATCDRDLKR IRKIPGVPIM+I+QH+YSIERLPEATIGGAP Sbjct: 137 TYADDCIVERVTRNKCYIVATCDRDLKRRIRKIPGVPIMFISQHQYSIERLPEATIGGAP 196
Query: 362 R 364 R Sbjct: 197 R 197
>tr|A7PZQ1|A7PZQ1_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026962001 PE=4 SV=1 Length = 204
Score = 236 bits (602), Expect = 7e-61 Identities = 110/118 (93%), Positives = 115/118 (97%) Frame = +2
Query: 2 SIQNKLDLEKAMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRVAKDPRFEQLPCTHKG 181 SIQNKLDLEK MMDCLYAKCTPCITDCVMAELEKLGQKYRVALR+AKDPRFE+L CTHKG Sbjct: 77 SIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRFERLLCTHKG 136
Query: 182 TYADDCIVDRVTQHKCYIVATCDRDLKRHIRKIPGVPIMYITQHRYSIERLPEATIGG 355 TYADDCIVDRVTQHKCYIVATCDRDLKR IRK+PGVPIMYIT+H+YSIERLPEATIGG Sbjct: 137 TYADDCIVDRVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITKHQYSIERLPEATIGG 194
>tr|O82346|O82346_ARATH Expressed protein (At2g46230/T3F17.12) OS=Arabidopsis thaliana GN=At2g46230 PE=2 SV=2 Length = 196
Score = 229 bits (585), Expect = 7e-59 Identities = 104/121 (85%), Positives = 113/121 (93%) Frame = +2
Query: 2 SIQNKLDLEKAMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRVAKDPRFEQLPCTHKG 181 SIQNK+DLEK M DCLYA CTPCITDCVMAELEKLGQKYRVALR+AKDP FE+LPC HKG Sbjct: 75 SIQNKIDLEKGMRDCLYANCTPCITDCVMAELEKLGQKYRVALRIAKDPHFERLPCIHKG 134
Query: 182 TYADDCIVDRVTQHKCYIVATCDRDLKRHIRKIPGVPIMYITQHRYSIERLPEATIGGAP 361 TYADDC+VDRVTQHKC+IVATCDRDLKR IRKIPGVPIMY+T +YSIE+LPEAT+GGAP Sbjct: 135 TYADDCLVDRVTQHKCFIVATCDRDLKRRIRKIPGVPIMYVTNRKYSIEKLPEATLGGAP 194
Query: 362 R 364 R Sbjct: 195 R 195
>tr|A3B8K9|A3B8K9_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_019381 PE=4 SV=1 Length = 206
Score = 228 bits (581), Expect = 2e-58 Identities = 109/127 (85%), Positives = 115/127 (90%), Gaps = 9/127 (7%) Frame = +2
Query: 2 SIQNKL---------DLEKAMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRVAKDPRF 154 SIQNKL DLEK MMDCLYAKCTPCITDCVMAELEKLGQKYRVALR+AKDPRF Sbjct: 78 SIQNKLNASLTPMQLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRIAKDPRF 137
Query: 155 EQLPCTHKGTYADDCIVDRVTQHKCYIVATCDRDLKRHIRKIPGVPIMYITQHRYSIERL 334 ++L CTHKGTYADDCIV+RVTQHKCYIVATCDRDLKR IRK+PGVPIMYIT+HRYSIERL Sbjct: 138 QRLACTHKGTYADDCIVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITRHRYSIERL 197
Query: 335 PEATIGG 355 PEATIGG Sbjct: 198 PEATIGG 204
>tr|A8J3T9|A8J3T9_CHLRE Predicted protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_118742 PE=4 SV=1 Length = 189
Score = 216 bits (549), Expect = 1e-54 Identities = 97/121 (80%), Positives = 111/121 (91%) Frame = +2
Query: 2 SIQNKLDLEKAMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRVAKDPRFEQLPCTHKG 181 SI+NK+DL + M+DCLYA+C PCITDCV+AELEKLGQKYRVAL+VAKDPR E+LPCTHKG Sbjct: 69 SIKNKIDLVRGMVDCLYAECKPCITDCVLAELEKLGQKYRVALKVAKDPRVERLPCTHKG 128
Query: 182 TYADDCIVDRVTQHKCYIVATCDRDLKRHIRKIPGVPIMYITQHRYSIERLPEATIGGAP 361 TYADDCI RV QH+CYIVATCDRDL+R IRKIPGVPIM++ HRYSIERLPEAT+GGAP Sbjct: 129 TYADDCICQRVQQHRCYIVATCDRDLRRRIRKIPGVPIMFLQSHRYSIERLPEATMGGAP 188
Query: 362 R 364 + Sbjct: 189 K 189
>tr|Q4FZ45|Q4FZ45_HUMAN Putative uncharacterized protein DKFZp686O2396 OS=Homo sapiens GN=DKFZp686O2396 PE=2 SV=1 Length = 198
Score = 211 bits (536), Expect = 3e-53 Identities = 99/121 (81%), Positives = 110/121 (90%) Frame = +2
Query: 2 SIQNKLDLEKAMMDCLYAKCTPCITDCVMAELEKLGQKYRVALRVAKDPRFEQLPCTHKG 181 SI+ KLDL ++MMDCLYAKC PCITDCVMAE+EKLGQKYRVALR+AKDPRFE+LPCTHKG Sbjct: 79 SIKAKLDLVQSMMDCLYAKCIPCITDCVMAEIEKLGQKYRVALRIAKDPRFERLPCTHKG 138
Query: 182 TYADDCIVDRVTQHKCYIVATCDRDLKRHIRKIPGVPIMYITQHRYSIERLPEATIGGAP 361 TYADDC+V RVTQHKCYIVAT DRDLKR IRKIPGVPIMYI+ HRY+IER+P+ GAP Sbjct: 139 TYADDCLVQRVTQHKCYIVATVDRDLKRRIRKIPGVPIMYISNHRYNIERMPDDY--GAP 196
Query: 362 R 364 R Sbjct: 197 R 197
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