BP914520
Clone id YMU001_000059_G10
Library
Length 567
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000059_G10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CTCGGAGCCAACGTGGTAGCGGTTGACAATTTCACAGAAAAACACTCCTTGTCTCTTTAT
TTTCCTGACACTGTCCACATGGATGGGGAGGAATTTATCAAGCAGGGAGGTGCACATGGC
CGTGCACTCCTCTTTTGTTGGCCCAGAAAAGATGATCCACTTCACCAGTTTAGCTCGGCA
AATGCACGAGGTCATCATGCTCGGCAGAGGCATGCTTGAATGCATTTCGTGGAGACACTG
TTTTTTTTGTCGGAGAGAAAGATGATGGATGCACATTCGACATGGAAGCGTGGATGCAAT
AAACTCCCAGGCGGAGAGGAATGTGGAGGCTGGAGAAGCAGATGAATATCCCATGTTGGC
CGGGGATACATGATGTTTTTGTGTTTCGTAAAGCAAAATGGGGCAAGTGGCAAGAAGAAA
AACAAGAACAAGAAGAAAGTTGCCAAGGAGGCAGAGAGTGTATTAAACTTGGTCAATGTG
GATGTTAGTTTGGAAGCGGCCACAGCTGCGTATCCGGAAAGCAGCCTCTGCAATCAACAA
TAGATCAGAGATGATGACTAGGATTGC
■■Homology search results ■■ -
sp_hit_id Q8IUH8
Definition sp|Q8IUH8|IMP5_HUMAN Signal peptide peptidase-like 2C OS=Homo sapiens
Align length 39
Score (bit) 37.0
E-value 0.069
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914520|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_G10.
(567 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8IUH8|IMP5_HUMAN Signal peptide peptidase-like 2C OS=Homo sa... 37 0.069
sp|Q7VCH7|KSGA_PROMA Dimethyladenosine transferase OS=Prochloroc... 31 3.7
sp|Q8NHA4|O2AE1_HUMAN Olfactory receptor 2AE1 OS=Homo sapiens GN... 31 4.9
sp|P20881|VPX_HV2ST Protein Vpx OS=Human immunodeficiency virus ... 31 4.9

>sp|Q8IUH8|IMP5_HUMAN Signal peptide peptidase-like 2C OS=Homo
sapiens GN=SPPL2C PE=1 SV=2
Length = 684

Score = 37.0 bits (84), Expect = 0.069
Identities = 13/39 (33%), Positives = 26/39 (66%)
Frame = -1

Query: 264 HLSLRQKKQCLHEMHSSMPLPSMMTSCICRAKLVKWIIF 148
HLSLRQ ++ H + +S+PLP ++ + +C ++ W+ +
Sbjct: 303 HLSLRQYQRPPHSLWASLPLPLLLLASLCATVIIFWVAY 341


>sp|Q7VCH7|KSGA_PROMA Dimethyladenosine transferase
OS=Prochlorococcus marinus GN=ksgA PE=3 SV=1
Length = 279

Score = 31.2 bits (69), Expect = 3.7
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = -3

Query: 367 IPGQHGIFICFSSLHIPLRLGVYCIHASMSNVHPSSFSPTKKTVS 233
+PGQ FS++ + L+L C S+ VHPSSFSP K S
Sbjct: 152 LPGQSS----FSAMSVRLQLLAKC--QSVCEVHPSSFSPQPKVYS 190


>sp|Q8NHA4|O2AE1_HUMAN Olfactory receptor 2AE1 OS=Homo sapiens
GN=OR2AE1 PE=2 SV=1
Length = 323

Score = 30.8 bits (68), Expect = 4.9
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = +2

Query: 59 IFLTLSTWMGRNLSSREVHMAV--HSSFVGPEKMIHF 163
+ + + +W+G +++S +HMA+ H F GP K+ HF
Sbjct: 142 LMMAVMSWLGASVNSL-IHMAILMHFPFCGPRKVYHF 177


>sp|P20881|VPX_HV2ST Protein Vpx OS=Human immunodeficiency virus
type 2 (isolate ST subtype A) GN=vpx PE=3 SV=1
Length = 112

Score = 30.8 bits (68), Expect = 4.9
Identities = 16/28 (57%), Positives = 17/28 (60%)
Frame = +1

Query: 256 RKMMDAHSTWKRGCNKLPGGEECGGWRS 339
+K M HS KRGC L GG GGWRS
Sbjct: 76 QKAMFIHS--KRGCTCLGGGHGPGGWRS 101


tr_hit_id A8JHG7
Definition tr|A8JHG7|A8JHG7_CHLRE Predicted protein OS=Chlamydomonas reinhardtii
Align length 56
Score (bit) 48.5
E-value 2.0e-08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914520|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_G10.
(567 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A8JHG7|A8JHG7_CHLRE Predicted protein OS=Chlamydomonas reinha... 49 2e-08
tr|A8JCQ4|A8JCQ4_CHLRE Predicted protein OS=Chlamydomonas reinha... 44 2e-06
tr|A8IZE4|A8IZE4_CHLRE Predicted protein (Fragment) OS=Chlamydom... 42 4e-06
tr|A8HPL9|A8HPL9_CHLRE Predicted protein (Fragment) OS=Chlamydom... 39 9e-06
tr|A8IVV0|A8IVV0_CHLRE Predicted protein (Fragment) OS=Chlamydom... 38 0.34
tr|Q8JKX3|Q8JKX3_9CAUD Putative uncharacterized protein OS=Natri... 35 2.2
tr|Q54D44|Q54D44_DICDI Putative polyketide synthase OS=Dictyoste... 27 3.9

>tr|A8JHG7|A8JHG7_CHLRE Predicted protein OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_180277 PE=4 SV=1
Length = 294

Score = 48.5 bits (114), Expect(2) = 2e-08
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +3

Query: 207 EACLNAFRGDTVFFVGEKDDGCTFDMEAWMQ*TPRRRGMWRLEKQMNIPCWPGIHD 374
EA L A+RGDTV VGE D+G T++++ W + WR +++ +P W GI D
Sbjct: 227 EASLAAYRGDTVVAVGEVDEGATWELKTW------KHPEWRQVRRVPLPNWLGIRD 276



Score = 32.7 bits (73), Expect(2) = 2e-08
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1

Query: 37 EKHSLSLYFPDTVHMDGEEF-IKQGGAHGRALLFCWPRKD 153
+K + +F DG EF ++ GG RALL CW R D
Sbjct: 185 KKEGVHRFFRSMHVCDGPEFLVRHGGCPDRALLLCWARHD 224


>tr|A8JCQ4|A8JCQ4_CHLRE Predicted protein OS=Chlamydomonas
reinhardtii GN=CHLREDRAFT_194015 PE=4 SV=1
Length = 151

Score = 43.9 bits (102), Expect(2) = 2e-06
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +3

Query: 207 EACLNAFRGDTVFFVGEKDDGCTFDMEAWMQ*TPRRRGMWRLEKQMNIPCWPGIHD 374
EA L A+RGDTV VGE G T++++ + WR +++ +P W GIHD
Sbjct: 83 EASLAAYRGDTVVAVGEVQQGATWELDREL------HPEWRQVRRVPLPNWTGIHD 132



Score = 31.2 bits (69), Expect(2) = 2e-06
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +1

Query: 82 DGEEFI-KQGGAHGRALLFCWPRKD 153
DG EF+ + GG RALL CW R D
Sbjct: 56 DGPEFLARHGGCPDRALLLCWARHD 80


>tr|A8IZE4|A8IZE4_CHLRE Predicted protein (Fragment)
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_148567 PE=4
SV=1
Length = 295

Score = 42.4 bits (98), Expect(2) = 4e-06
Identities = 22/56 (39%), Positives = 32/56 (57%)
Frame = +3

Query: 207 EACLNAFRGDTVFFVGEKDDGCTFDMEAWMQ*TPRRRGMWRLEKQMNIPCWPGIHD 374
EA L A+RGDTV VGE G T++++ + WR +++ +P W GIHD
Sbjct: 230 EASLAAYRGDTVVAVGEVYTGATWELDREL------HPEWRQVRRVPLPNWTGIHD 279



Score = 31.2 bits (69), Expect(2) = 4e-06
Identities = 14/25 (56%), Positives = 16/25 (64%), Gaps = 1/25 (4%)
Frame = +1

Query: 82 DGEEFI-KQGGAHGRALLFCWPRKD 153
DG EF+ + GG RALL CW R D
Sbjct: 203 DGPEFLARHGGCPDRALLLCWARHD 227


>tr|A8HPL9|A8HPL9_CHLRE Predicted protein (Fragment)
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_146284 PE=4
SV=1
Length = 307

Score = 38.5 bits (88), Expect(2) = 9e-06
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +3

Query: 207 EACLNAFRGDTVFFVGEKDDGCTFDMEAWMQ*TPRRRGMWRLEKQMNIPCWPGIHD 374
EA L A+RGDTV V + G T+++++ R+ WR +++ +P W GIHD
Sbjct: 240 EASLAAYRGDTV--VAVVNTGATWELDS------RKHPEWRQVRRVPLPQWRGIHD 287



Score = 33.9 bits (76), Expect(2) = 9e-06
Identities = 25/75 (33%), Positives = 29/75 (38%), Gaps = 25/75 (33%)
Frame = +1

Query: 4 GANVVAVDNFTEKHSLS------------------------LYFPDTVHMDGEEFI-KQG 108
G +VVAVDN +E H YF DG EF+ + G
Sbjct: 163 GVDVVAVDNDSEYHFEEEPADGEEPAAADGEDAEVPKGPPIRYFKSMQVCDGPEFLARHG 222

Query: 109 GAHGRALLFCWPRKD 153
G RALL CW R D
Sbjct: 223 GCPDRALLLCWARHD 237


>tr|A8IVV0|A8IVV0_CHLRE Predicted protein (Fragment)
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_172474 PE=4
SV=1
Length = 253

Score = 38.1 bits (87), Expect = 0.34
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Frame = +3

Query: 204 AEACLNAFRGDTVFFVGEKDDGCTFDMEA-----WMQ*TPRRRGMWR 329
A A L A+RGDTV VGE D GCT+++ W Q + RR + R
Sbjct: 195 ARASLAAYRGDTVVAVGETDMGCTWELNTEEHPEWRQHSQRRGQLGR 241


>tr|Q8JKX3|Q8JKX3_9CAUD Putative uncharacterized protein
OS=Natrialba phage PhiCh1 PE=4 SV=1
Length = 191

Score = 35.4 bits (80), Expect = 2.2
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = +3

Query: 204 AEACLNAFRGDTVFFVGEKDDGCTFDMEAWMQ*TPRRRGMWRLEKQMNIPCWPGIHD 374
A + AF GDT+ +VGE GCT D W L + + IP + GIHD
Sbjct: 132 AADAVEAFEGDTLIYVGEGRGGCTGDDRFHR----LLHQEWELVETVAIPTYLGIHD 184


>tr|Q54D44|Q54D44_DICDI Putative polyketide synthase OS=Dictyostelium
discoideum GN=pks42 PE=4 SV=1
Length = 2658

Score = 27.3 bits (59), Expect(2) = 3.9
Identities = 16/52 (30%), Positives = 23/52 (44%)
Frame = -1

Query: 168 LVKWIIFSGPTKEECTAMCTSLLDKFLPIHVDSVRKIKRQGVFFCEIVNRYH 13
+ K I PTK ++ LD+F + DS I+R F E + YH
Sbjct: 1294 IFKAINARSPTKINLESLENLTLDQFKELIKDSAANIQRSNQFIYECLKLYH 1345



Score = 25.4 bits (54), Expect(2) = 3.9
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = -3

Query: 343 ICFSSLHIPLRLGVYCIHASMSNVHPSSFSPTKKTVSPRNAFKH 212
+C SS IP+ I S ++H + P + P +FKH
Sbjct: 1227 VCKSS--IPIIDSTSVIQPSPKDLHTPYYQPKNSLIKPPQSFKH 1268