BP914525
Clone id YMU001_000059_H03
Library
Length 530
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000059_H03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CACAGAAACAGCATACCCAAGAAGTGCAGTAAATCCTCATAGAGACATTAGGAGCATGGA
GATGGCAAGTCCTCATACCGAGGAATCGCTTGCCGCCGACGAACACACGAGGATGATGCC
CGCTAATAGAAAAATAAGTGGTGTGAAACCATCAAAGCAAACCAGAAAACCCCTTCTGCA
GCAGAGTGATCCTTCAGGCCCTATTGTGGGAGAGCATTACTATGACTCTCACAGAGCCAG
TCAGGCAGCTTCTGCATCTTATCATATGGGTAATATTGATTCAGGTGGAGCTCATTGGAA
CTATGAACAAGATGGATCACGGCCATCGTATAGAAGGTAATGGAGGGCCCACCAAAATTA
AGCATTTCCCCCAAGTGTGCTTGAAATACAGAATTAATGCAGACTTGTAATTGGCAAGTC
ATAAATGCCGCAAGTAAAGGAAAGAAGCATATGGATCAAGCAAGGGTACAAGATTCCATT
GTATGTACAATGTTCATTCTATGTCTCCCATAGCTCAGTGTGAATGGTGC
■■Homology search results ■■ -
sp_hit_id O56773
Definition sp|O56773|PHOSP_LBV Phosphoprotein OS=Lagos bat virus
Align length 98
Score (bit) 32.0
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914525|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_H03.
(530 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O56773|PHOSP_LBV Phosphoprotein OS=Lagos bat virus GN=P PE=2 ... 32 1.9
sp|Q5F3X8|SC31A_CHICK Protein transport protein Sec31A OS=Gallus... 31 3.2
sp|Q8LAL2|IAA26_ARATH Auxin-responsive protein IAA26 OS=Arabidop... 30 5.5
sp|Q4JC46|PURT_SULAC Phosphoribosylglycinamide formyltransferase... 30 7.2
sp|P18494|GLN3_YEAST Nitrogen regulatory protein GLN3 OS=Sacchar... 30 7.2
sp|Q2T710|BIPC_BURTA Effector protein bipC OS=Burkholderia thail... 30 7.2
sp|A8MUQ0|PN6BL_HUMAN Putative paraneoplastic antigen-like prote... 30 9.4
sp|P35458|DCTN1_CHICK Dynactin subunit 1 OS=Gallus gallus GN=DCT... 30 9.4

>sp|O56773|PHOSP_LBV Phosphoprotein OS=Lagos bat virus GN=P PE=2
SV=1
Length = 305

Score = 32.0 bits (71), Expect = 1.9
Identities = 20/98 (20%), Positives = 41/98 (41%)
Frame = +2

Query: 17 PRSAVNPHRDIRSMEMASPHTEESLAADEHTRMMPANRKISGVKPSKQTRKPLLQQSDPS 196
P + + ++ ++ P + + + + + GVKP K + + +D
Sbjct: 136 PETQATVSKPTQTDSLSVPRPSQGYTSVPRDKPSNSESQGGGVKPKKVQKSEWTRDTDEI 195

Query: 197 GPIVGEHYYDSHRASQAASASYHMGNIDSGGAHWNYEQ 310
I GE +H+ +++ S Y + SG WN+EQ
Sbjct: 196 SDIEGEV---AHQVAESFSKKYKFPSRSSGIFLWNFEQ 230


>sp|Q5F3X8|SC31A_CHICK Protein transport protein Sec31A OS=Gallus
gallus GN=SEC31A PE=2 SV=1
Length = 1227

Score = 31.2 bits (69), Expect = 3.2
Identities = 30/105 (28%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Frame = +2

Query: 71 PHTEESLAADEHTRMMPANRK--ISGVKPSKQ-TRKPLLQQSD---PSGPIVGEHYYDSH 232
P +E++ A + MP +R ++G P Q + + QQ D P G I+ S
Sbjct: 800 PAGQEAIKAPYERQPMPKDRAGPVAGQVPGPQASAQQYYQQGDKPPPPGFIMPGAINPSA 859

Query: 233 RASQAASASYHMGNIDSGGAHWNYEQDGSRPSYRR*WRAHQN*AF 367
QA S SY+M Y Q G+RP+Y + ++ Q +F
Sbjct: 860 PPQQATSPSYNM-----------YSQAGTRPAYPQTYQTTQQYSF 893


>sp|Q8LAL2|IAA26_ARATH Auxin-responsive protein IAA26 OS=Arabidopsis
thaliana GN=IAA26 PE=2 SV=2
Length = 269

Score = 30.4 bits (67), Expect = 5.5
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2

Query: 152 SKQTRKPLLQQSDPS-GPIVGEHYYDSHRASQAASASYHMGNIDSGGAHWNYEQDGSR 322
+K T P + Q + GP+VG S R + A+++S +GN S G N DG +
Sbjct: 86 NKTTSVPHISQKRTAPGPVVGWPPVRSFRKNLASTSSSKLGNESSHGGQINKSDDGEK 143


>sp|Q4JC46|PURT_SULAC Phosphoribosylglycinamide formyltransferase 2
OS=Sulfolobus acidocaldarius GN=purT PE=3 SV=1
Length = 398

Score = 30.0 bits (66), Expect = 7.2
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = -1

Query: 392 SVFQAHLGEMLNFGGPSITFYTMAVIHLVHSSNELHLNQYYPYDKMQKLP 243
S FQ H+ L P + T A H++ +S E +Y DK ++P
Sbjct: 304 SEFQVHVRSALGLPTPDVKVVTPAAAHVILASGEKWAPKYINVDKALEIP 353


>sp|P18494|GLN3_YEAST Nitrogen regulatory protein GLN3
OS=Saccharomyces cerevisiae GN=GLN3 PE=1 SV=2
Length = 730

Score = 30.0 bits (66), Expect = 7.2
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2

Query: 23 SAVNPHRDIRSMEMASPHTEESLAADEHTRMMPANRKISGVKPSKQTRKPLLQ 181
S+ N +R + P + SLA R + IS ++PS Q +KPL+Q
Sbjct: 255 SSSNTTNSVRKNSLIKPMSSTSLA--NFKRAASVSSSISNMEPSGQNKKPLIQ 305


>sp|Q2T710|BIPC_BURTA Effector protein bipC OS=Burkholderia
thailandensis (strain E264 / ATCC 700388 / DSM 13276 /
CIP 106301) GN=bipC PE=3 SV=1
Length = 409

Score = 30.0 bits (66), Expect = 7.2
Identities = 20/77 (25%), Positives = 34/77 (44%)
Frame = +2

Query: 59 EMASPHTEESLAADEHTRMMPANRKISGVKPSKQTRKPLLQQSDPSGPIVGEHYYDSHRA 238
E+ H E++L + + +N ++S VK ++T + + + DP GE D H +
Sbjct: 236 ELKQFHAEQALELRGINKPVLSNDEVSHVKVKRETGESVRHEIDPG----GERMSDEHAS 291

Query: 239 SQAASASYHMGNIDSGG 289
A A ID G
Sbjct: 292 VLAQEAPARQHRIDMHG 308


>sp|A8MUQ0|PN6BL_HUMAN Putative paraneoplastic antigen-like protein
6B-like protein OS=Homo sapiens PE=3 SV=1
Length = 334

Score = 29.6 bits (65), Expect = 9.4
Identities = 14/31 (45%), Positives = 18/31 (58%)
Frame = +3

Query: 285 VELIGTMNKMDHGHRIEGNGGPTKIKHFPQV 377
VE +N+ H+I GNGGP K+ PQV
Sbjct: 67 VEFAEYLNRSLIPHQIPGNGGPWKVIFLPQV 97


>sp|P35458|DCTN1_CHICK Dynactin subunit 1 OS=Gallus gallus GN=DCTN1
PE=2 SV=2
Length = 1224

Score = 29.6 bits (65), Expect = 9.4
Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Frame = +2

Query: 59 EMASPHTEESLAAD---EHTRMMPANRKISGVKPSKQT-RKPLLQQSDPSGPIVGEHYYD 226
+ SP T ES A H+R K+ G KP K T R+P ++ S P
Sbjct: 103 DTTSPETPESAALKVPKRHSRXAAKGSKLRGAKPKKTTARRPKPTRTPTSAP-------S 155

Query: 227 SHRASQAASASYHMGNIDS 283
S A + SAS G + S
Sbjct: 156 SGTAGPSGSASASGGEMSS 174


tr_hit_id A3ZWW8
Definition tr|A3ZWW8|A3ZWW8_9PLAN Putative uncharacterized protein OS=Blastopirellula marina DSM 3645
Align length 122
Score (bit) 35.8
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914525|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_H03.
(530 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A3ZWW8|A3ZWW8_9PLAN Putative uncharacterized protein OS=Blast... 36 1.4
tr|Q29DT1|Q29DT1_DROPS GA17729 OS=Drosophila pseudoobscura pseud... 33 6.9
tr|B8CFE7|B8CFE7_THAPS Predicted protein OS=Thalassiosira pseudo... 33 9.0
tr|A5BMN8|A5BMN8_VITVI Putative uncharacterized protein OS=Vitis... 33 9.0
tr|Q8SRS4|Q8SRS4_ENCCU DNA REPLICATION LICENSING FACTOR OF THE M... 33 9.0

>tr|A3ZWW8|A3ZWW8_9PLAN Putative uncharacterized protein
OS=Blastopirellula marina DSM 3645 GN=DSM3645_14050 PE=4
SV=1
Length = 400

Score = 35.8 bits (81), Expect = 1.4
Identities = 30/122 (24%), Positives = 47/122 (38%), Gaps = 10/122 (8%)
Frame = +2

Query: 11 AYPRSAVNPHRDIRSMEMASP-HTEESLAADEHTRMMPANRKISGVKPSKQTRKPLLQQS 187
A+ +P+ D S+EMA P T S AA H +R++ ++ ++ L +
Sbjct: 61 AFSAGLQSPNSDQTSLEMAPPLGTSSSPAAASHDHASGHDRQLPLIEAQPVSQNNLADST 120

Query: 188 DPSGPIVGEHY---------YDSHRASQAASASYHMGNIDSGGAHWNYEQDGSRPSYRR* 340
P P Y YD+ + +A A+ N GG RPS+
Sbjct: 121 APYQPPAASTYGSSSYENSSYDAVVSDDSAYAAASSANAGYGGMEARPASANMRPSFESD 180

Query: 341 WR 346
WR
Sbjct: 181 WR 182


>tr|Q29DT1|Q29DT1_DROPS GA17729 OS=Drosophila pseudoobscura
pseudoobscura GN=GA17729 PE=4 SV=2
Length = 742

Score = 33.5 bits (75), Expect = 6.9
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 5/104 (4%)
Frame = +2

Query: 29 VNPHRDIRSMEMASPHTEESLAADEHTRMMPANRKISGVKPSKQTRKPLLQQSDPS---- 196
VNP+ ++RS + + H AAD+ +M P ++ + Q ++ QQ +P+
Sbjct: 357 VNPYNEMRSAILQNSHHPSGNAADQAAQMHPQVQQQHQQQHQPQQQQ---QQHNPTPVAA 413

Query: 197 -GPIVGEHYYDSHRASQAASASYHMGNIDSGGAHWNYEQDGSRP 325
+V H + ++ S + +YH N ++ G+ RP
Sbjct: 414 VAAVVPHHSHLNNNPSNGSVTTYHSFNSNNNGSQQMLPPQMRRP 457


>tr|B8CFE7|B8CFE7_THAPS Predicted protein OS=Thalassiosira
pseudonana CCMP1335 GN=THAPSDRAFT_11737 PE=4 SV=1
Length = 144

Score = 33.1 bits (74), Expect = 9.0
Identities = 24/103 (23%), Positives = 42/103 (40%), Gaps = 3/103 (2%)
Frame = +2

Query: 20 RSAVNPHRDIRSMEMASPHTEESLAADEHTRMMPANRKISGVKPSKQTRKPLLQQSDPSG 199
+SA +D R + + S A ++ R AN+ S + +DP+
Sbjct: 46 KSAAQKRQDQRDSRRSYTNPNRSQAEEDRERQRKANQSWSRNN----------RLADPND 95

Query: 200 PIVGEHYYDSHRASQAASASYHMG---NIDSGGAHWNYEQDGS 319
P G+ YYD + + Y+ G N D+ ++ Y+ D S
Sbjct: 96 PNEGQRYYDRNGNIRDRIRCYYRGPNCNYDAASGYYYYDDDDS 138


>tr|A5BMN8|A5BMN8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_034689 PE=4 SV=1
Length = 916

Score = 33.1 bits (74), Expect = 9.0
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Frame = -2

Query: 352 VGPPLPSIRWP*SILFIVPMSST*INITHMIRCRSCLTGSV---RVIVM 215
+ PPL IRWP F+ M S N++ IRC S + GS RVIV+
Sbjct: 138 ITPPLRQIRWP----FLXXMGS---NVSEQIRCISAIVGSYHWQRVIVV 179


>tr|Q8SRS4|Q8SRS4_ENCCU DNA REPLICATION LICENSING FACTOR OF THE MCM
FAMILY MCM5 OS=Encephalitozoon cuniculi GN=ECU06_0340
PE=3 SV=1
Length = 696

Score = 33.1 bits (74), Expect = 9.0
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +3

Query: 279 IQVELIGTMNKMDHGHRIEGNGGPTKIKHFPQVCLKYRI 395
I++ + TMN + GH +EG P I H ++C + R+
Sbjct: 607 IRLFKVSTMNAVSQGHMLEGMVRPDVINHIEEICSRIRL 645