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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914529
Clone id YMU001_000059_H07
Library
Length 561
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000059_H07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCACAGAGGGGGCTGTGCGCAGTTGAATATCCGAGCCCTGAGCGGCATGTTGGAGACGCA
TGTTAGTCCAGCCAGGGGCTATGTGGATTCTACCAGCTTACAGGGGTTGAAGCAGAAGCA
GAGCCCGCTGGGGCTGCCTCTATTGTTATTCAGCAGGTCATTCCCTGCACCTTGCGGGGT
ACTCTGTTTTGCGTAGACAGTCAAGCCAGAGAGGGCTACGTTGTGTATTTGGAGCAGTTT
GGACAGCTTCAGACTCAGGCTAGCGGGTGCAAGGCCCCTCCTTTACATTGTGCTTTAAGG
TCTATGCCTGCAGTGGGTTGTGGTTGCGCGATTACCCACTGTGGGTTGTGGTTATTTGGA
TCTCCACCTGGTCTCTGTTGAGACAGACTGTCGAGACGGTTTGAGGCTTTTCGACTAGTC
TCTCGAGTGAGACTCGAGCCCCTTTTGTTGTATGCCTGTAAGGGTGAGCCTTGGTGCTCT
GAACCCTATTGTACTCCTTTTTGTCTGAGTCGACTTGGCTCCCCGAGTTTGAGGTGAATT
ACCCCTCACTCGTGGGATATG
■■Homology search results ■■ -
sp_hit_id P50809
Definition sp|P50809|VE2_HPV36 Regulatory protein E2 OS=Human papillomavirus type 36
Align length 80
Score (bit) 35.0
E-value 0.25
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914529|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_H07.
         (561 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P50809|VE2_HPV36 Regulatory protein E2 OS=Human papillomaviru...    35   0.25 
sp|Q6UY14|ATL4_HUMAN ADAMTS-like protein 4 OS=Homo sapiens GN=AD...    31   3.7  
sp|Q2V3H2|PUP7_ARATH Probable purine permease 7 OS=Arabidopsis t...    30   6.2  
sp|Q8RY74|PUP21_ARATH Probable purine permease 21 OS=Arabidopsis...    30   6.2  
sp|Q7NEF2|EFG_GLOVI Elongation factor G OS=Gloeobacter violaceus...    30   6.2  
sp|Q27452|PRP2_BOMMO Phenoloxidase subunit 2 OS=Bombyx mori PE=1...    30   8.1  

>sp|P50809|VE2_HPV36 Regulatory protein E2 OS=Human papillomavirus
           type 36 GN=E2 PE=3 SV=1
          Length = 509

 Score = 35.0 bits (79), Expect = 0.25
 Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
 Frame = -1

Query: 546 RGNSPQTRGAKSTQTKRSTIGFRAPRLTLTGIQQKGLESHSRD*S-------KSLKPSRQ 388
           R ++P TR A    T RS    R+P L  TG+Q+    S SR  S       +S  PS  
Sbjct: 283 RSHTPTTRSA----TTRS----RSPSLAKTGVQRVSTRSRSRSTSRRGGRRRRSRSPSTS 334

Query: 387 SVSTETRWRSK*PQPTVGNR 328
           S +T T  RS+    T G+R
Sbjct: 335 SSTTTTNKRSRVRAETTGSR 354


>sp|Q6UY14|ATL4_HUMAN ADAMTS-like protein 4 OS=Homo sapiens
           GN=ADAMTSL4 PE=1 SV=2
          Length = 1074

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
 Frame = +1

Query: 235 QFGQLQTQ----ASGCKAPPLHCALRSMPAVGCGCAITHCGLWLFGSPPGLC*DRLSR 396
           Q  QLQ +      G   PP  C     P +   C +  CG W  GSP   C  R  R
Sbjct: 744 QHRQLQCRQEFGGGGSSVPPERCGHLPRPNITQSCQLRLCGHWEVGSPWSQCSVRCGR 801


>sp|Q2V3H2|PUP7_ARATH Probable purine permease 7 OS=Arabidopsis
           thaliana GN=PUP7 PE=2 SV=1
          Length = 390

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
 Frame = +3

Query: 270 QGPSFTLCFKVYACSGLWLRDY----PLWVVVIWISTWSL-LRQTVETV*GFSTSLSSET 434
           Q PSFT    VY C+GL +  Y     + ++ + +ST+SL L   +     FS  L+S+ 
Sbjct: 109 QSPSFTTLASVYLCTGLLVSAYAYLSAVGLLYLPVSTFSLILASQLAFTAFFSYFLNSQK 168

Query: 435 RAPFVV 452
             P +V
Sbjct: 169 FTPLIV 174


>sp|Q8RY74|PUP21_ARATH Probable purine permease 21 OS=Arabidopsis
           thaliana GN=PUP21 PE=2 SV=1
          Length = 377

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
 Frame = +3

Query: 270 QGPSFTLCFKVYACSGLWLRDY----PLWVVVIWISTWSL-LRQTVETV*GFSTSLSSET 434
           Q PSFT    VY C+GL +  Y     + ++ + +ST+SL L   +     FS  L+S+ 
Sbjct: 106 QSPSFTTLASVYLCTGLLVSAYAYLSAVGLLYLPVSTFSLILASQLAFTAFFSYFLNSQK 165

Query: 435 RAPFVV 452
             P +V
Sbjct: 166 FTPLIV 171


>sp|Q7NEF2|EFG_GLOVI Elongation factor G OS=Gloeobacter violaceus
           GN=fusA PE=3 SV=1
          Length = 707

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 24/92 (26%), Positives = 43/92 (46%)
 Frame = -2

Query: 545 GVIHLKLGEPSRLRQKGVQ*GSEHQGSPLQAYNKRGSSLTRETSRKASNRLDSLSQQRPG 366
           G +HL++     LR+  V+    + G+P  AY        RET RKA N ++ L +++ G
Sbjct: 466 GELHLEILVDRMLREFKVE---ANVGAPQVAY--------RETIRKAVNNVEGLYKRQTG 514

Query: 365 GDPNNHNPQWVIAQPQPTAGIDLKAQCKGGAL 270
           G     +    +   +P  G +  ++  GG +
Sbjct: 515 GKGQYGHVVINLEPGEPGTGFEFVSKIVGGVV 546


>sp|Q27452|PRP2_BOMMO Phenoloxidase subunit 2 OS=Bombyx mori PE=1
           SV=2
          Length = 693

 Score = 30.0 bits (66), Expect = 8.1
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = -2

Query: 428 TRETSRKASNRLDSLSQQRPGGDPNNHNPQWVIAQPQPTAGID 300
           TR        ++ S+S + PGG PN  N  W+++    + G+D
Sbjct: 426 TRSELENPGVQVRSVSVETPGGQPNTLNTFWMLSDVNLSRGLD 468
tr_hit_id A7L831
Definition tr|A7L831|A7L831_SHEEP Receptor transporter protein-4 OS=Ovis aries
Align length 79
Score (bit) 40.0
E-value 0.086
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914529|Adiantum capillus-veneris mRNA, clone:
YMU001_000059_H07.
         (561 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A7L831|A7L831_SHEEP Receptor transporter protein-4 OS=Ovis ar...    40   0.086
tr|B3C6V7|B3C6V7_9BACE Putative uncharacterized protein OS=Bacte...    35   2.8  
tr|B8K4I5|B8K4I5_VIBPA Two-component system sensor histidine kin...    34   6.2  
tr|A6PM42|A6PM42_9BACT Glycosyl transferase, family 39 OS=Victiv...    33   8.1  
tr|A0YWU6|A0YWU6_9CYAN Adenylate cyclase OS=Lyngbya sp. PCC 8106...    33   8.1  
tr|A7QG06|A7QG06_VITVI Chromosome chr9 scaffold_90, whole genome...    33   8.1  
tr|Q4DHE0|Q4DHE0_TRYCR Eukaryotic translation initiation factor ...    33   8.1  
tr|Q4DCN0|Q4DCN0_TRYCR Eukaryotic translation initiation factor ...    33   8.1  

>tr|A7L831|A7L831_SHEEP Receptor transporter protein-4 OS=Ovis aries
           GN=RTP4 PE=2 SV=1
          Length = 534

 Score = 40.0 bits (92), Expect = 0.086
 Identities = 28/79 (35%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
 Frame = -2

Query: 503 QKGVQ*GSEHQGSPLQAYNKRGSSLTRETSRKASNRLDSLSQQRPGGDPNNHNPQWVI-A 327
           Q+  Q     QG+ LQA        TR T  +A++R DS ++ R G  P   + Q V  A
Sbjct: 321 QRSTQDAQATQGAQLQATKTAEPQPTRGTMPRATSRSDSQAKARAGPPPQGSSSQPVQGA 380

Query: 326 QPQPTAGIDLKAQCKGGAL 270
            P+ T G D++A  K G L
Sbjct: 381 IPKATTGSDIEATGKAGPL 399


>tr|B3C6V7|B3C6V7_9BACE Putative uncharacterized protein
           OS=Bacteroides intestinalis DSM 17393 GN=BACINT_00647
           PE=4 SV=1
          Length = 470

 Score = 35.0 bits (79), Expect = 2.8
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = +2

Query: 233 SSLDSFRLRLAGARPLLYIVL*GLCLQWVVVARLPTVGCGYLDLHLVSVETDCRDGLRLF 412
           S+ D  R  L   +   YI   G+  QW     +PT+ C Y +L+L+  ET+C +G   +
Sbjct: 280 SNPDYVRTALRDEQAAKYIK--GVGFQWDGKKAIPTIHCEYPNLNLMQTETECGNGANSW 337

Query: 413 D 415
           D
Sbjct: 338 D 338


>tr|B8K4I5|B8K4I5_VIBPA Two-component system sensor histidine kinase
           OS=Vibrio parahaemolyticus 16 GN=VPMS16_1006 PE=4 SV=1
          Length = 478

 Score = 33.9 bits (76), Expect = 6.2
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = +2

Query: 359 DLHLVSVETDCRDGLRLFD*SLE*DSSPFCCMPVRVSLGALNPIVLL 499
           D+  +SVE   RD LR+F+  L  D  P       +S GALNP +L+
Sbjct: 123 DIPNISVEFTQRDNLRVFNNELPIDELPLLWAHYSLSFGALNPPILV 169


>tr|A6PM42|A6PM42_9BACT Glycosyl transferase, family 39
           OS=Victivallis vadensis ATCC BAA-548 GN=VvadDRAFT_1754
           PE=4 SV=1
          Length = 562

 Score = 33.5 bits (75), Expect = 8.1
 Identities = 26/71 (36%), Positives = 34/71 (47%)
 Frame = +2

Query: 134 LPLLLFSRSFPAPCGVLCFA*TVKPERATLCIWSSLDSFRLRLAGARPLLYIVL*GLCLQ 313
           LP LLFS S    C +  +     P  A L    +L++FRLR   AR +L I    L L 
Sbjct: 308 LPFLLFSAS---SCKLGTYILPCFPPLAALIAAGTLEAFRLRPGSARKILDITFKSLGLL 364

Query: 314 WVVVARLPTVG 346
              +A + TVG
Sbjct: 365 LAALAVIATVG 375


>tr|A0YWU6|A0YWU6_9CYAN Adenylate cyclase OS=Lyngbya sp. PCC 8106
           GN=L8106_03659 PE=4 SV=1
          Length = 639

 Score = 33.5 bits (75), Expect = 8.1
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = +3

Query: 333 YPLWVVVIWISTWSLLRQTVETV*GFSTSLSSETRAPFVVCL*G*AL--VL*TLLYSFLS 506
           +P WV +IWIS+W+++           T+L+  +R P ++ L    L  +L TL +    
Sbjct: 326 WPQWVEIIWISSWAII----------GTTLAWLSRHPLILVLGSPLLLGILFTLSFMLFL 375

Query: 507 ESTWLP 524
            + W+P
Sbjct: 376 NAYWVP 381


>tr|A7QG06|A7QG06_VITVI Chromosome chr9 scaffold_90, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00037643001
           PE=4 SV=1
          Length = 400

 Score = 33.5 bits (75), Expect = 8.1
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 5/73 (6%)
 Frame = +2

Query: 206 PERATLCIWSSLDSFRLRLAGARPLLYIVL*G-----LCLQWVVVARLPTVGCGYLDLHL 370
           P  A L +W++ D F+L+L GA PL Y    G       L W+    +P V   +    L
Sbjct: 247 PTFAILSVWNTKDVFKLQLKGASPLTYAWCAGTRALDAYLPWLHFPSIPNVFKQFGVYFL 306

Query: 371 VSVETDCRDGLRL 409
             +  + + GLRL
Sbjct: 307 HGLHMEGKHGLRL 319


>tr|Q4DHE0|Q4DHE0_TRYCR Eukaryotic translation initiation factor 3
           subunit 7-like protein, putative OS=Trypanosoma cruzi
           GN=Tc00.1047053509065.160 PE=4 SV=1
          Length = 502

 Score = 33.5 bits (75), Expect = 8.1
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 51  WRRMLVQPGAMWILPAYRG*SRSRARWGCLYCYSAG 158
           WR+ L   GA WI   YR  ++  +RW CL C+ +G
Sbjct: 361 WRKTLDSQGAKWISDEYRRNAQKMSRWVCL-CHLSG 395


>tr|Q4DCN0|Q4DCN0_TRYCR Eukaryotic translation initiation factor 3
           subunit 7-like protein, putative OS=Trypanosoma cruzi
           GN=Tc00.1047053506943.160 PE=4 SV=1
          Length = 502

 Score = 33.5 bits (75), Expect = 8.1
 Identities = 15/36 (41%), Positives = 21/36 (58%)
 Frame = +3

Query: 51  WRRMLVQPGAMWILPAYRG*SRSRARWGCLYCYSAG 158
           WR+ L   GA WI   YR  ++  +RW CL C+ +G
Sbjct: 361 WRKTLDSQGAKWISDEYRRNAQKMSRWVCL-CHLSG 395