| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914535|Adiantum capillus-veneris mRNA, clone:
YMU001_000060_A03.
(646 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from tra... 111 6e-25
sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster G... 63 8e-10
sp|P25600|YCH4_YEAST Putative transposon Ty5-1 protein YCL074W O... 57 2e-09
sp|P92519|M810_ARATH Uncharacterized mitochondrial protein AtMg0... 51 5e-06
sp|Q99231|YD12B_YEAST Transposon Ty1-DR3 Gag-Pol polyprotein OS=... 33 0.093
sp|O13527|YA11B_YEAST Transposon Ty1-A Gag-Pol polyprotein OS=Sa... 33 0.093
sp|Q99337|YN12B_YEAST Transposon Ty1-NL2 Gag-Pol polyprotein OS=... 33 0.093
sp|Q5G872|SCUB2_DANRE Signal peptide, CUB and EGF-like domain-co... 37 0.12
sp|Q03855|YD11B_YEAST Transposon Ty1-DR1 Gag-Pol polyprotein OS=... 32 0.12
sp|Q12193|YB12B_YEAST Transposon Ty1-BR Gag-Pol polyprotein OS=S... 32 0.15
sp|O13535|YH11B_YEAST Transposon Ty1-H Gag-Pol polyprotein OS=Sa... 32 0.20
sp|P0C2J0|YP13B_YEAST Transposon Ty1-PR2 Gag-Pol polyprotein OS=... 32 0.20
sp|Q12414|YP11B_YEAST Transposon Ty1-PL Gag-Pol polyprotein OS=S... 32 0.20
sp|Q12273|YO11B_YEAST Transposon Ty1-OL Gag-Pol polyprotein OS=S... 32 0.20
sp|Q04670|YM14B_YEAST Transposon Ty1-MR2 Gag-Pol polyprotein OS=... 32 0.20
sp|Q03434|YM12B_YEAST Transposon Ty1-ML2 Gag-Pol polyprotein OS=... 32 0.20
sp|Q04711|YM11B_YEAST Transposon Ty1-ML1 Gag-Pol polyprotein OS=... 32 0.20
sp|P0C2I5|YL12B_YEAST Transposon Ty1-LR2 Gag-Pol polyprotein OS=... 32 0.20
sp|Q12088|YL11B_YEAST Transposon Ty1-LR1 Gag-Pol polyprotein OS=... 32 0.20
sp|Q12269|YG12B_YEAST Transposon Ty1-GR2 Gag-Pol polyprotein OS=... 32 0.20
sp|Q03619|YE12B_YEAST Transposon Ty1-ER2 Gag-Pol polyprotein OS=... 32 0.20
sp|Q03612|YE11B_YEAST Transposon Ty1-ER1 Gag-Pol polyprotein OS=... 32 0.20
sp|P0C2I2|YD14B_YEAST Transposon Ty1-DR5 Gag-Pol polyprotein OS=... 32 0.20
sp|Q04214|YM13B_YEAST Transposon Ty1-MR1 Gag-Pol polyprotein OS=... 30 0.42
sp|Q12141|YG11B_YEAST Transposon Ty1-GR1 Gag-Pol polyprotein OS=... 30 0.42
sp|Q12490|YB11B_YEAST Transposon Ty1-BL Gag-Pol polyprotein OS=S... 30 0.42
sp|Q92393|YO12B_YEAST Transposon Ty1-OR Gag-Pol polyprotein OS=S... 30 0.70
sp|Q12316|YG13B_YEAST Transposon Ty1-GR3 Gag-Pol polyprotein OS=... 30 0.70
sp|Q6NZL8|SCUB1_MOUSE Signal peptide, CUB and EGF-like domain-co... 34 0.75
sp|Q12337|YG21B_YEAST Transposon Ty2-GR1 Gag-Pol polyprotein OS=... 30 0.90
>sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from
transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1
Length = 1328
Score = 111 bits (277), Expect(2) = 6e-25
Identities = 56/110 (50%), Positives = 77/110 (70%), Gaps = 1/110 (0%)
Frame = +1
Query: 172 WYIKFDKYIQSQSYVRSQGDHCLYTRMLNNGSLITLILYVDDMLIVGRSKDEIA-LKDAL 348
WY+KFD +++SQ+Y+++ D C+Y + + + I L+LYVDDMLIVG+ K IA LK L
Sbjct: 970 WYMKFDSFMKSQTYLKTYSDPCVYFKRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDL 1029
Query: 349 SKQFAMKDLGDAHHFLGIRIKRDGKCGILKLSQEEYIHKVLQRFNMQRGK 498
SK F MKDLG A LG++I R+ L LSQE+YI +VL+RFNM+ K
Sbjct: 1030 SKSFDMKDLGPAQQILGMKIVRERTSRKLWLSQEKYIERVLERFNMKNAK 1079
Score = 23.1 bits (48), Expect(2) = 6e-25
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +2
Query: 128 LVCRVKKSLYGL 163
+VC++ KSLYGL
Sbjct: 952 MVCKLNKSLYGL 963
Score = 40.4 bits (93), Expect = 0.008
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Frame = +3
Query: 468 LATF*HAKGKILSAPMVA*VKLSKNDYL-----KLNAEKVPYSLVVSNLIFAVVSTRPEI 632
L F K +S P+ +KLSK K N KVPYS V +L++A+V TRP+I
Sbjct: 1070 LERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSAVGSLMYAMVCTRPDI 1129
Query: 633 AFAV 644
A AV
Sbjct: 1130 AHAV 1133
Score = 33.1 bits (74), Expect = 1.3
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +2
Query: 8 WYIKFDKYIQFQGYVRSQGDHCLYTRTLNNGS 103
WY+KFD +++ Q Y+++ D C+Y + + +
Sbjct: 970 WYMKFDSFMKSQTYLKTYSDPCVYFKRFSENN 1001
>sp|P04146|COPIA_DROME Copia protein OS=Drosophila melanogaster GN=GIP
PE=1 SV=3
Length = 1409
Score = 62.8 bits (151), Expect(2) = 8e-10
Identities = 38/111 (34%), Positives = 66/111 (59%), Gaps = 5/111 (4%)
Frame = +1
Query: 172 WYIKFDKYIQSQSYVRSQGDHCLYTRMLNNGSL---ITLILYVDDMLIVGRSKDEIA-LK 339
W+ F++ ++ +V S D C+Y +L+ G++ I ++LYVDD++I + K
Sbjct: 1048 WFEVFEQALKECEFVNSSVDRCIY--ILDKGNINENIYVLLYVDDVVIATGDMTRMNNFK 1105
Query: 340 DALSKQFAMKDLGDAHHFLGIRIK-RDGKCGILKLSQEEYIHKVLQRFNMQ 489
L ++F M DL + HF+GIRI+ ++ K + LSQ Y+ K+L +FNM+
Sbjct: 1106 RYLMEKFRMTDLNEIKHFIGIRIEMQEDK---IYLSQSAYVKKILSKFNME 1153
Score = 20.4 bits (41), Expect(2) = 8e-10
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = +2
Query: 131 VCRVKKSLYGL 163
VC++ K++YGL
Sbjct: 1031 VCKLNKAIYGL 1041
>sp|P25600|YCH4_YEAST Putative transposon Ty5-1 protein YCL074W
OS=Saccharomyces cerevisiae GN=TY5A PE=4 SV=2
Length = 308
Score = 57.0 bits (136), Expect(2) = 2e-09
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 1/100 (1%)
Frame = +1
Query: 169 LWYIKFDKYIQSQSYVRSQGDHCLYTRMLNNGSLITLILYVDDMLIVGRS-KDEIALKDA 345
LW + ++ + R +G+H LY R ++G I + +YVDD+L+ S K +K
Sbjct: 49 LWNEHINNTLKKIGFCRHEGEHGLYFRSTSDGP-IYIAVYVDDLLVAAPSPKIYDRVKQE 107
Query: 346 LSKQFAMKDLGDAHHFLGIRIKRDGKCGILKLSQEEYIHK 465
L+K ++MKDLG FLG+ I + G + LS ++YI K
Sbjct: 108 LTKLYSMKDLGKVDKFLGLNIHQSSN-GDITLSLQDYIAK 146
Score = 24.6 bits (52), Expect(2) = 2e-09
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +3
Query: 573 PYSLVVSNLIFAVVSTRPEIAFAV 644
PY +V L+F + RP+I++ V
Sbjct: 182 PYQSIVGQLLFCANTGRPDISYPV 205
>sp|P92519|M810_ARATH Uncharacterized mitochondrial protein
AtMg00810 OS=Arabidopsis thaliana GN=AtMg00810 PE=4 SV=1
Length = 240
Score = 51.2 bits (121), Expect = 5e-06
Identities = 32/71 (45%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Frame = +1
Query: 277 LILYVDDMLIVGRSKDEI-ALKDALSKQFAMKDLGDAHHFLGIRIKRDGKCGILKLSQEE 453
L+LYVDD+L+ G S + L LS F+MKDLG H+FLGI+IK L LSQ +
Sbjct: 3 LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSG--LFLSQTK 60
Query: 454 YIHKVLQRFNM 486
Y ++L M
Sbjct: 61 YAEQILNNAGM 71
>sp|Q99231|YD12B_YEAST Transposon Ty1-DR3 Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY1B-DR3 PE=1 SV=2
Length = 1755
Score = 32.7 bits (73), Expect(2) = 0.093
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Frame = +1
Query: 172 WYIKFDKYIQSQSYVRS-QGDHCLYTRMLNNGSLITLILYVDDMLIVGRSKDEIALK--- 339
WY Y+ Q + +G C++ S +T+ L+VDDM++ SKD A K
Sbjct: 1391 WYETIKSYLIKQCGMEEVRGWSCVF-----KNSQVTICLFVDDMILF--SKDLNANKKII 1443
Query: 340 DALSKQFAMK--DLGDA-----HHFLGIRIK-RDGKCGILKLSQEEYIHKVLQRFNM 486
L KQ+ K +LG++ + LG+ IK + GK +KL E+ + + L + N+
Sbjct: 1444 TTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGK--YMKLGMEKSLTEKLPKLNV 1498
Score = 22.7 bits (47), Expect(2) = 0.093
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 137 RVKKSLYGLSHCGTS 181
R+KKSLYGL G +
Sbjct: 1376 RLKKSLYGLKQSGAN 1390
>sp|O13527|YA11B_YEAST Transposon Ty1-A Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY1B-A PE=1 SV=2
Length = 1755
Score = 32.7 bits (73), Expect(2) = 0.093
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 12/117 (10%)
Frame = +1
Query: 172 WYIKFDKYIQSQSYVRS-QGDHCLYTRMLNNGSLITLILYVDDMLIVGRSKDEIALK--- 339
WY Y+ Q + +G C++ S +T+ L+VDDM++ SKD A K
Sbjct: 1391 WYETIKSYLIKQCGMEEVRGWSCVF-----KNSQVTICLFVDDMILF--SKDLNANKKII 1443
Query: 340 DALSKQFAMK--DLGDA-----HHFLGIRIK-RDGKCGILKLSQEEYIHKVLQRFNM 486
L KQ+ K +LG++ + LG+ IK + GK +KL E+ + + L + N+
Sbjct: 1444 TTLKKQYDTKIINLGESDNEIQYDILGLEIKYQRGK--YMKLGMEKSLTEKLPKLNV 1498
Score = 22.7 bits (47), Expect(2) = 0.093
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 137 RVKKSLYGLSHCGTS 181
R+KKSLYGL G +
Sbjct: 1376 RLKKSLYGLKQSGAN 1390
>sp|Q99337|YN12B_YEAST Transposon Ty1-NL2 Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY1B-NL2 PE=1 SV=1
Length = 1749
Score = 32.7 bits (73), Expect(2) = 0.093
Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Frame = +1
Query: 172 WYIKFDKYIQSQSYVRS-QGDHCLYTRMLNNGSLITLILYVDDMLIVGRSKDEIALK--- 339
WY Y+ Q + +G C++ S +T+ L+VDDM++ SKD A K
Sbjct: 1385 WYETIKSYLIEQCDMEEVRGWSCVF-----KNSQVTICLFVDDMILF--SKDLNANKKII 1437
Query: 340 DALSKQFAMK--DLGDA-----HHFLGIRIKRDGKCGILKLSQEEYIHKVLQRFNM 486
L KQ+ K +LG++ + LG+ IK + +KL E+ + + L + N+
Sbjct: 1438 TTLKKQYDTKIINLGESDNEIQYDILGLEIKYQ-RSKYMKLGMEKSLTEKLPKLNV 1492
Score = 22.7 bits (47), Expect(2) = 0.093
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 137 RVKKSLYGLSHCGTS 181
R+KKSLYGL G +
Sbjct: 1370 RLKKSLYGLKQSGAN 1384
>sp|Q5G872|SCUB2_DANRE Signal peptide, CUB and EGF-like
domain-containing protein 2 OS=Danio rerio GN=scube2
PE=2 SV=1
Length = 1010
Score = 36.6 bits (83), Expect = 0.12
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 65 DHCLYTRTLNNGSLEKPTRVELVCRVKKSLYGLSHCG 175
D C + RT ++ + P + VC +LYGL+HCG
Sbjct: 349 DECFFERTCDHTCVNSPGSFQCVCNKGYTLYGLAHCG 385
>sp|Q03855|YD11B_YEAST Transposon Ty1-DR1 Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY1B-DR1 PE=1 SV=2
Length = 1755
Score = 32.3 bits (72), Expect(2) = 0.12
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 11/116 (9%)
Frame = +1
Query: 172 WYIKFDKYIQSQSYVRS-QGDHCLYTRMLNNGSLITLILYVDDMLIVGRSKDEIALK--- 339
WY Y+ Q + +G C++ S +T+ L+VDDM++ SKD A K
Sbjct: 1391 WYETIKSYLIKQCGMEEVRGWSCVF-----KNSQVTICLFVDDMILF--SKDLNANKKII 1443
Query: 340 DALSKQFAMK--DLGDA-----HHFLGIRIKRDGKCGILKLSQEEYIHKVLQRFNM 486
L KQ+ K +LG+ + LG+ IK + +KL E+ + + L + N+
Sbjct: 1444 TTLKKQYDTKIINLGEGDNEIQYDILGLEIKYQ-RSKYMKLGMEKSLTEKLPKLNV 1498
Score = 22.7 bits (47), Expect(2) = 0.12
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 137 RVKKSLYGLSHCGTS 181
R+KKSLYGL G +
Sbjct: 1376 RLKKSLYGLKQSGAN 1390
>sp|Q12193|YB12B_YEAST Transposon Ty1-BR Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY1B-BR PE=1 SV=1
Length = 1756
Score = 32.0 bits (71), Expect(2) = 0.15
Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 10/115 (8%)
Frame = +1
Query: 172 WYIKFDKYIQSQSYVRS-QGDHCLYTRMLNNGSLITLILYVDDMLIVGR---SKDEIALK 339
WY Y+ Q + +G C++ S +T+ L+VDDM++ + S I K
Sbjct: 1392 WYETIKSYLIKQCGMEEVRGWSCVF-----KNSQVTICLFVDDMILFSKDLNSNKRIIAK 1446
Query: 340 DALSKQFAMKDLGDA-----HHFLGIRIK-RDGKCGILKLSQEEYIHKVLQRFNM 486
+ + +LG++ H LG+ IK + GK +KL E + + + + N+
Sbjct: 1447 LKMQYDTKIINLGESDDEIQHDILGLEIKYQRGK--YMKLGMENSLTEKIPKLNV 1499
Score = 22.7 bits (47), Expect(2) = 0.15
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 137 RVKKSLYGLSHCGTS 181
R+KKSLYGL G +
Sbjct: 1377 RLKKSLYGLKQSGAN 1391
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914535|Adiantum capillus-veneris mRNA, clone:
YMU001_000060_A03.
(646 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q9SHR5|Q9SHR5_ARATH F28L22.3 protein OS=Arabidopsis thaliana ... 112 1e-29
tr|B8YLY7|B8YLY7_LOTJA Gag-Pol polyprotein OS=Lotus japonicus PE... 108 1e-28
tr|B8YLY4|B8YLY4_MEDTR Gag-Pol polyprotein OS=Medicago truncatul... 105 1e-27
tr|Q02902|Q02902_ARATH Orf 3 (Fragment) OS=Arabidopsis thaliana ... 106 1e-27
tr|B8YLY6|B8YLY6_MEDTR Gag-Pol polyprotein OS=Medicago truncatul... 105 2e-27
tr|B8YLY3|B8YLY3_MEDTR Gag-Pol polyprotein OS=Medicago truncatul... 105 2e-27
tr|B8YLY5|B8YLY5_MEDTR Gag-Pol polyprotein OS=Medicago truncatul... 103 5e-27
tr|A5ATR7|A5ATR7_VITVI Putative uncharacterized protein OS=Vitis... 102 5e-27
tr|A5BE52|A5BE52_VITVI Putative uncharacterized protein OS=Vitis... 104 1e-26
tr|Q5MG99|Q5MG99_IPOBA Hypothetical retrotransposon OS=Ipomoea b... 101 1e-26
tr|Q0DX39|Q0DX39_ORYSJ Os02g0776400 protein OS=Oryza sativa subs... 108 2e-26
tr|Q7XV90|Q7XV90_ORYSJ OSJNBb0012E08.6 protein OS=Oryza sativa s... 106 2e-26
tr|Q6AUC7|Q6AUC7_ORYSJ Putative polyprotein OS=Oryza sativa subs... 102 4e-26
tr|Q9AUZ1|Q9AUZ1_ARATH Polyprotein, putative OS=Arabidopsis thal... 100 5e-26
tr|Q53ND1|Q53ND1_ORYSJ Os11g0157000 protein OS=Oryza sativa subs... 99 6e-26
tr|A5BAP9|A5BAP9_VITVI Putative uncharacterized protein OS=Vitis... 97 6e-26
tr|Q6L4V3|Q6L4V3_ORYSJ Putative polyprotein OS=Oryza sativa subs... 99 1e-25
tr|A5B4P6|A5B4P6_VITVI Putative uncharacterized protein OS=Vitis... 105 1e-25
tr|Q2QSQ2|Q2QSQ2_ORYSJ Retrotransposon protein, putative, Ty1-co... 103 3e-25
tr|Q25A78|Q25A78_ORYSA H0413E07.4 protein OS=Oryza sativa GN=H04... 100 5e-25
tr|Q25A71|Q25A71_ORYSA H0306F03.15 protein OS=Oryza sativa GN=H0... 100 5e-25
tr|Q7XP09|Q7XP09_ORYSJ OSJNBb0013J13.11 protein OS=Oryza sativa ... 101 5e-25
tr|Q0J4E9|Q0J4E9_ORYSJ Os08g0518300 protein OS=Oryza sativa subs... 98 6e-25
tr|Q9FFM0|Q9FFM0_ARATH Copia-like retrotransposable element OS=A... 105 6e-25
tr|A5CAX7|A5CAX7_VITVI Putative uncharacterized protein OS=Vitis... 112 1e-24
tr|A5BK92|A5BK92_VITVI Putative uncharacterized protein OS=Vitis... 112 1e-24
tr|Q5GA69|Q5GA69_SOLLC Putative polyprotein OS=Solanum lycopersi... 112 1e-24
tr|Q9ZRJ0|Q9ZRJ0_TOBAC Retrotransposon Tto1 DNA OS=Nicotiana tab... 111 2e-24
tr|A5BYJ3|A5BYJ3_VITVI Putative uncharacterized protein OS=Vitis... 111 2e-24
tr|A5B4L0|A5B4L0_VITVI Putative uncharacterized protein OS=Vitis... 99 2e-24
>tr|Q9SHR5|Q9SHR5_ARATH F28L22.3 protein OS=Arabidopsis thaliana
GN=F28L22.3 PE=4 SV=1
Length = 1356
Score = 112 bits (281), Expect(3) = 1e-29
Identities = 58/110 (52%), Positives = 75/110 (68%), Gaps = 1/110 (0%)
Frame = +1
Query: 172 WYIKFDKYIQSQSYVRSQGDHCLYTRMLNNGSLITLILYVDDMLIVGRSKDEI-ALKDAL 348
W +FD+++ SQ ++RS+ D C+Y + ++ I L+LYVDDMLI G SK EI +K+ L
Sbjct: 999 WNKRFDRFMSSQQFIRSEHDACVYVKHVSEHDFIYLLLYVDDMLIAGASKAEINRVKEQL 1058
Query: 349 SKQFAMKDLGDAHHFLGIRIKRDGKCGILKLSQEEYIHKVLQRFNMQRGK 498
S +F MKD+G A LGI I RD K G+LKLSQE YI KVL RFNM K
Sbjct: 1059 STEFEMKDMGGASRILGIDIYRDRKGGVLKLSQEIYIRKVLDRFNMSGAK 1108
Score = 35.4 bits (80), Expect(3) = 1e-29
Identities = 17/52 (32%), Positives = 36/52 (69%), Gaps = 2/52 (3%)
Frame = +3
Query: 495 KILSAPMVA*VKLS--KNDYLKLNAEKVPYSLVVSNLIFAVVSTRPEIAFAV 644
K+ +AP+ A KL+ + + ++ + VPYS V ++++A++ TRP++A+A+
Sbjct: 1108 KMTNAPVGAHFKLAAVREEDECVDTDVVPYSSAVGSIMYAMLGTRPDLAYAI 1159
Score = 25.4 bits (54), Expect(3) = 1e-29
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2
Query: 131 VCRVKKSLYGL 163
VCR+KKSLYGL
Sbjct: 982 VCRLKKSLYGL 992
>tr|B8YLY7|B8YLY7_LOTJA Gag-Pol polyprotein OS=Lotus japonicus PE=4
SV=1
Length = 1305
Score = 108 bits (271), Expect(3) = 1e-28
Identities = 54/107 (50%), Positives = 73/107 (68%), Gaps = 1/107 (0%)
Frame = +1
Query: 172 WYIKFDKYIQSQSYVRSQGDHCLYTRMLNNGSLITLILYVDDMLIVGRSKDEI-ALKDAL 348
WY +FD +I S Y R DHC Y + ++G I L+LYVDDML+VG +KD + LK L
Sbjct: 947 WYKRFDSFIMSLGYNRLSSDHCTYYKRFDDGDFIILLLYVDDMLVVGPNKDRVQELKAQL 1006
Query: 349 SKQFAMKDLGDAHHFLGIRIKRDGKCGILKLSQEEYIHKVLQRFNMQ 489
+++F MKDLG A+ LG++I RD K + LSQ+ Y+ KVL+RFNMQ
Sbjct: 1007 AREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLQKVLRRFNMQ 1053
Score = 34.3 bits (77), Expect(3) = 1e-28
Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +3
Query: 501 LSAPMVA*VKLSKNDYLKLNAEK-----VPYSLVVSNLIFAVVSTRPEIAFAV 644
+S P+ KLS + AE+ VPY+ V +L++A++ TRP+IA AV
Sbjct: 1058 ISTPLPVNYKLSSSMIPSSEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAV 1110
Score = 27.3 bits (59), Expect(3) = 1e-28
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +2
Query: 107 EKPTRVELVCRVKKSLYGL 163
E+ R LVCR+ KSLYGL
Sbjct: 922 EEKERENLVCRLTKSLYGL 940
Score = 35.8 bits (81), Expect = 2.3
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 8 WYIKFDKYIQFQGYVRSQGDHCLYTRTLNNG 100
WY +FD +I GY R DHC Y + ++G
Sbjct: 947 WYKRFDSFIMSLGYNRLSSDHCTYYKRFDDG 977
>tr|B8YLY4|B8YLY4_MEDTR Gag-Pol polyprotein OS=Medicago truncatula
PE=4 SV=1
Length = 1305
Score = 105 bits (262), Expect(3) = 1e-27
Identities = 53/107 (49%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Frame = +1
Query: 172 WYIKFDKYIQSQSYVRSQGDHCLYTRMLNNGSLITLILYVDDMLIVGRSKDEI-ALKDAL 348
WY +FD +I S Y R DHC Y + + I L+LYVDDML+VG +KD + LK L
Sbjct: 947 WYKRFDSFIISLDYSRLSSDHCTYYKRFDGNDFIILLLYVDDMLVVGPNKDRVQELKAQL 1006
Query: 349 SKQFAMKDLGDAHHFLGIRIKRDGKCGILKLSQEEYIHKVLQRFNMQ 489
+++F MKDLG A+ LG++I RD K + LSQ+ Y+ KVL+RFNMQ
Sbjct: 1007 AREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQ 1053
Score = 37.0 bits (84), Expect(3) = 1e-27
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Frame = +3
Query: 495 KILSAPMVA*VKLSK-----NDYLKLNAEKVPYSLVVSNLIFAVVSTRPEIAFAV 644
K +S P+ KLS N+ ++ +VPY+ V +L++A++ TRP+IA AV
Sbjct: 1056 KPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAV 1110
Score = 24.6 bits (52), Expect(3) = 1e-27
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2
Query: 128 LVCRVKKSLYGL 163
LVCR+ KSLYGL
Sbjct: 929 LVCRLTKSLYGL 940
>tr|Q02902|Q02902_ARATH Orf 3 (Fragment) OS=Arabidopsis thaliana
PE=4 SV=1
Length = 494
Score = 106 bits (265), Expect(3) = 1e-27
Identities = 52/110 (47%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
Frame = +1
Query: 172 WYIKFDKYIQSQSYVRSQGDHCLYTRMLNNGSLITLILYVDDMLIVGRSKDEI-ALKDAL 348
W +F +++ Q+++RS+ D C+Y + + L+LYVDDMLI G+SK EI +K+ L
Sbjct: 231 WNKRFSRFMIDQNFIRSEHDACVYVKQAGEQDHLYLLLYVDDMLIAGKSKSEINKVKEQL 290
Query: 349 SKQFAMKDLGDAHHFLGIRIKRDGKCGILKLSQEEYIHKVLQRFNMQRGK 498
S +F MKD+G A LGI I RD K G+L++SQ YIH V+QRFNM K
Sbjct: 291 SMEFEMKDMGPASRILGIDIIRDRKNGVLRMSQARYIHNVVQRFNMAEAK 340
Score = 37.7 bits (86), Expect(3) = 1e-27
Identities = 17/55 (30%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Frame = +3
Query: 486 AKGKILSAPMVA*VKLS--KNDYLKLNAEKVPYSLVVSNLIFAVVSTRPEIAFAV 644
A+ K+ +P+ A KL+ ++D ++ +PY+ V N+++A++ TRP++A+A+
Sbjct: 337 AEAKVTRSPIGAHFKLAAVRDDDECIDNNALPYASAVGNIMYAMIGTRPDLAYAI 391
Score = 22.7 bits (47), Expect(3) = 1e-27
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 131 VCRVKKSLYGL 163
VC +KKSLYGL
Sbjct: 214 VCLLKKSLYGL 224
>tr|B8YLY6|B8YLY6_MEDTR Gag-Pol polyprotein OS=Medicago truncatula
PE=4 SV=1
Length = 1305
Score = 105 bits (261), Expect(3) = 2e-27
Identities = 53/107 (49%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Frame = +1
Query: 172 WYIKFDKYIQSQSYVRSQGDHCLYTRMLNNGSLITLILYVDDMLIVGRSKDEIA-LKDAL 348
WY +FD +I S Y R DHC Y + + I L+LYVDDML+VG +KD + LK L
Sbjct: 947 WYKRFDSFIISLDYNRLSSDHCTYYKRFDGNDFIILLLYVDDMLVVGPNKDRVQELKAQL 1006
Query: 349 SKQFAMKDLGDAHHFLGIRIKRDGKCGILKLSQEEYIHKVLQRFNMQ 489
+++F MKDLG A+ LG++I RD K + LSQ+ Y+ KVL+RFNMQ
Sbjct: 1007 AREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQ 1053
Score = 37.0 bits (84), Expect(3) = 2e-27
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Frame = +3
Query: 495 KILSAPMVA*VKLSK-----NDYLKLNAEKVPYSLVVSNLIFAVVSTRPEIAFAV 644
K +S P+ KLS N+ ++ +VPY+ V +L++A++ TRP+IA AV
Sbjct: 1056 KPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAV 1110
Score = 24.6 bits (52), Expect(3) = 2e-27
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2
Query: 128 LVCRVKKSLYGL 163
LVCR+ KSLYGL
Sbjct: 929 LVCRLTKSLYGL 940
>tr|B8YLY3|B8YLY3_MEDTR Gag-Pol polyprotein OS=Medicago truncatula
PE=4 SV=1
Length = 1305
Score = 105 bits (261), Expect(3) = 2e-27
Identities = 53/107 (49%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Frame = +1
Query: 172 WYIKFDKYIQSQSYVRSQGDHCLYTRMLNNGSLITLILYVDDMLIVGRSKDEI-ALKDAL 348
WY +FD +I S Y R DHC Y + + I L+LYVDDML+VG +KD + LK L
Sbjct: 947 WYKRFDSFIISLDYSRLSSDHCTYYKRFDGNDFIILLLYVDDMLVVGPNKDRVQELKAQL 1006
Query: 349 SKQFAMKDLGDAHHFLGIRIKRDGKCGILKLSQEEYIHKVLQRFNMQ 489
+++F MKDLG A+ LG++I RD K + LSQ+ Y+ KVL+RFNMQ
Sbjct: 1007 AREFDMKDLGPANKILGMQIHRDRKDMKIWLSQKNYLRKVLRRFNMQ 1053
Score = 37.0 bits (84), Expect(3) = 2e-27
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Frame = +3
Query: 495 KILSAPMVA*VKLSK-----NDYLKLNAEKVPYSLVVSNLIFAVVSTRPEIAFAV 644
K +S P+ KLS N+ ++ +VPY+ V +L++A++ TRP+IA AV
Sbjct: 1056 KPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAV 1110
Score = 24.6 bits (52), Expect(3) = 2e-27
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2
Query: 128 LVCRVKKSLYGL 163
LVCR+ KSLYGL
Sbjct: 929 LVCRLTKSLYGL 940
>tr|B8YLY5|B8YLY5_MEDTR Gag-Pol polyprotein OS=Medicago truncatula
PE=4 SV=1
Length = 1305
Score = 103 bits (257), Expect(3) = 5e-27
Identities = 52/107 (48%), Positives = 71/107 (66%), Gaps = 1/107 (0%)
Frame = +1
Query: 172 WYIKFDKYIQSQSYVRSQGDHCLYTRMLNNGSLITLILYVDDMLIVGRSKDEIA-LKDAL 348
WY +FD +I S Y R DHC Y + + I L+LYVDD+L+VG +KD + LK L
Sbjct: 947 WYKRFDSFIISLDYNRLSSDHCTYYKRFDGNDFIILLLYVDDILVVGPNKDRVQELKAQL 1006
Query: 349 SKQFAMKDLGDAHHFLGIRIKRDGKCGILKLSQEEYIHKVLQRFNMQ 489
+++F MKDLG A+ LG++I RD K + LSQ+ Y+ KVL+RFNMQ
Sbjct: 1007 AREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQ 1053
Score = 37.0 bits (84), Expect(3) = 5e-27
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Frame = +3
Query: 495 KILSAPMVA*VKLSK-----NDYLKLNAEKVPYSLVVSNLIFAVVSTRPEIAFAV 644
K +S P+ KLS N+ ++ +VPY+ V +L++A++ TRP+IA AV
Sbjct: 1056 KPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAV 1110
Score = 24.6 bits (52), Expect(3) = 5e-27
Identities = 10/12 (83%), Positives = 11/12 (91%)
Frame = +2
Query: 128 LVCRVKKSLYGL 163
LVCR+ KSLYGL
Sbjct: 929 LVCRLTKSLYGL 940
>tr|A5ATR7|A5ATR7_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_031328 PE=4 SV=1
Length = 885
Score = 102 bits (254), Expect(2) = 5e-27
Identities = 56/110 (50%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Frame = +1
Query: 172 WYIKFDKYIQSQSYVRSQGDHCLYTRMLNNGSLITLILYVDDMLIVGRSKDEIA-LKDAL 348
WY KFD ++ + R + DHC Y + +N S I L+LYV+DMLI G ++I LK L
Sbjct: 599 WYKKFDNFMHRIGFKRCEADHCCYVKSFDN-SYIILLLYVNDMLIAGSDIEKINNLKKQL 657
Query: 349 SKQFAMKDLGDAHHFLGIRIKRDGKCGILKLSQEEYIHKVLQRFNMQRGK 498
SKQF MKDLG A L ++I RD G LKLSQ EY+ KVL RFNM K
Sbjct: 658 SKQFVMKDLGVAKQILSMKIIRDKANGTLKLSQLEYVKKVLNRFNMNEAK 707
Score = 42.4 bits (98), Expect(2) = 5e-27
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 5/57 (8%)
Frame = +3
Query: 489 KGKILSAPMVA*VKLSKNDYLKLNAEK-----VPYSLVVSNLIFAVVSTRPEIAFAV 644
+ K +S P+ + KLSK LK EK VPY+ + +L++A+V TRP+IA AV
Sbjct: 705 EAKPVSTPLGSHFKLSKEQSLKTEEEKDHMSKVPYASTIGSLMYAMVCTRPDIAHAV 761
Score = 36.2 bits (82), Expect = 1.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 8 WYIKFDKYIQFQGYVRSQGDHCLYTRTLNN 97
WY KFD ++ G+ R + DHC Y ++ +N
Sbjct: 599 WYKKFDNFMHRIGFKRCEADHCCYVKSFDN 628
>tr|A5BE52|A5BE52_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_039063 PE=4 SV=1
Length = 1643
Score = 104 bits (259), Expect(3) = 1e-26
Identities = 52/110 (47%), Positives = 74/110 (67%), Gaps = 1/110 (0%)
Frame = +1
Query: 172 WYIKFDKYIQSQSYVRSQGDHCLYTRMLNNGSLITLILYVDDMLIVGRSKDEI-ALKDAL 348
WY +FD ++ S ++R+Q D C+Y + L +GS I L+LYVDDMLI +++ EI LK L
Sbjct: 1275 WYKRFDAFMVSHEFMRNQYDSCVYFKTLPDGSFIYLLLYVDDMLIAAKNRAEINKLKQLL 1334
Query: 349 SKQFAMKDLGDAHHFLGIRIKRDGKCGILKLSQEEYIHKVLQRFNMQRGK 498
S +F MKDLG A LG+ I RD G+L +SQ++YI K++Q F+M K
Sbjct: 1335 SSEFEMKDLGAAKKILGMEIWRDRDAGLLYVSQQKYIEKLMQAFHMDHSK 1384
Score = 37.4 bits (85), Expect(3) = 1e-26
Identities = 16/27 (59%), Positives = 23/27 (85%)
Frame = +3
Query: 564 EKVPYSLVVSNLIFAVVSTRPEIAFAV 644
+ VPYS VV +L++A+V TRP++AFAV
Sbjct: 1412 KSVPYSSVVGSLMYAMVCTRPDLAFAV 1438
Score = 22.3 bits (46), Expect(3) = 1e-26
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +2
Query: 131 VCRVKKSLYGL 163
VC +KKSLYGL
Sbjct: 1258 VCFLKKSLYGL 1268
Score = 34.7 bits (78), Expect = 5.1
Identities = 13/32 (40%), Positives = 22/32 (68%)
Frame = +2
Query: 8 WYIKFDKYIQFQGYVRSQGDHCLYTRTLNNGS 103
WY +FD ++ ++R+Q D C+Y +TL +GS
Sbjct: 1275 WYKRFDAFMVSHEFMRNQYDSCVYFKTLPDGS 1306
>tr|Q5MG99|Q5MG99_IPOBA Hypothetical retrotransposon OS=Ipomoea
batatas PE=4 SV=1
Length = 1415
Score = 101 bits (251), Expect(3) = 1e-26
Identities = 51/110 (46%), Positives = 69/110 (62%), Gaps = 1/110 (0%)
Frame = +1
Query: 172 WYIKFDKYIQSQSYVRSQGDHCLYTRMLNNGSLITLILYVDDMLIVGRSKDEIA-LKDAL 348
WY KF + Y ++ DHC++ ++ + L+LYVDDMLIVGR+ I LK L
Sbjct: 968 WYKKFTSVMSKHGYKKTSSDHCVFVNRYSDDDFVILLLYVDDMLIVGRNASRIQELKQEL 1027
Query: 349 SKQFAMKDLGDAHHFLGIRIKRDGKCGILKLSQEEYIHKVLQRFNMQRGK 498
SK F+MKD+G A LG++I RD + L LSQE+YI KVL+RF+M K
Sbjct: 1028 SKSFSMKDMGPAKQILGMKIIRDRQNKKLWLSQEKYIEKVLERFHMNEAK 1077
Score = 36.6 bits (83), Expect(3) = 1e-26
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 5/57 (8%)
Frame = +3
Query: 489 KGKILSAPMVA*VKLSK-----NDYLKLNAEKVPYSLVVSNLIFAVVSTRPEIAFAV 644
+ K +S P+ KL K ++ K ++VPYS V +L++A+V TRP+IA AV
Sbjct: 1075 EAKPVSTPLDMHFKLCKKQCPSSEKEKEEMQRVPYSSAVGSLMYAMVCTRPDIAHAV 1131
Score = 25.8 bits (55), Expect(3) = 1e-26
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +2
Query: 125 ELVCRVKKSLYGL 163
+ VCR+KKSLYGL
Sbjct: 949 DYVCRLKKSLYGL 961
|