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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914548
Clone id YMU001_000060_B06
Library
Length 229
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000060_B06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AATCCGTTGGCTTTCTCAACAGGGGTAGGCTACACATGTCTATCTGTTCTTTGGGGAGAA
TTATAAAAATTATGCCCTGAATCCTCATTGAAAAACATCCAAAACATCAGCCTTCTTGTA
ATAGAGTTTCTCGTTGTTGTAGCGTCAAACAAGGCCTTTGTTGTTGACTTTCACAANGAA
TCCAGGGCAATTTGTTCGTTGTGGCCAAGGGATTTTGATTGTTTACCAT
■■Homology search results ■■ -
sp_hit_id Q5T754
Definition sp|Q5T754|LCE1F_HUMAN Late cornified envelope protein 1F OS=Homo sapiens
Align length 22
Score (bit) 32.7
E-value 0.59
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914548|Adiantum capillus-veneris mRNA, clone:
YMU001_000060_B06.
         (229 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5T754|LCE1F_HUMAN Late cornified envelope protein 1F OS=Homo...    33   0.59 
sp|Q5T753|LCE1E_HUMAN Late cornified envelope protein 1E OS=Homo...    33   0.59 
sp|Q5T752|LCE1D_HUMAN Late cornified envelope protein 1D OS=Homo...    33   0.59 
sp|Q5T751|LCE1C_HUMAN Late cornified envelope protein 1C OS=Homo...    33   0.59 
sp|Q5T7P3|LCE1B_HUMAN Late cornified envelope protein 1B OS=Homo...    33   0.59 
sp|Q5T7P2|LCE1A_HUMAN Late cornified envelope protein 1A OS=Homo...    33   0.59 

>sp|Q5T754|LCE1F_HUMAN Late cornified envelope protein 1F OS=Homo
           sapiens GN=LCE1F PE=2 SV=1
          Length = 118

 Score = 32.7 bits (73), Expect = 0.59
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +3

Query: 99  PKHQPSCNRVSRCCSVKQGLCC 164
           PK  P C  VS CCSV  G CC
Sbjct: 31  PKCPPKCPPVSSCCSVSSGGCC 52


>sp|Q5T753|LCE1E_HUMAN Late cornified envelope protein 1E OS=Homo
           sapiens GN=LCE1E PE=2 SV=1
          Length = 118

 Score = 32.7 bits (73), Expect = 0.59
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +3

Query: 99  PKHQPSCNRVSRCCSVKQGLCC 164
           PK  P C  VS CCSV  G CC
Sbjct: 31  PKCPPKCPPVSSCCSVSSGGCC 52


>sp|Q5T752|LCE1D_HUMAN Late cornified envelope protein 1D OS=Homo
           sapiens GN=LCE1D PE=2 SV=1
          Length = 114

 Score = 32.7 bits (73), Expect = 0.59
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +3

Query: 99  PKHQPSCNRVSRCCSVKQGLCC 164
           PK  P C  VS CCSV  G CC
Sbjct: 27  PKCPPKCPPVSSCCSVSSGGCC 48


>sp|Q5T751|LCE1C_HUMAN Late cornified envelope protein 1C OS=Homo
           sapiens GN=LCE1C PE=2 SV=1
          Length = 118

 Score = 32.7 bits (73), Expect = 0.59
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +3

Query: 99  PKHQPSCNRVSRCCSVKQGLCC 164
           PK  P C  VS CCSV  G CC
Sbjct: 31  PKCPPKCPPVSSCCSVSSGGCC 52


>sp|Q5T7P3|LCE1B_HUMAN Late cornified envelope protein 1B OS=Homo
           sapiens GN=LCE1B PE=2 SV=1
          Length = 118

 Score = 32.7 bits (73), Expect = 0.59
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +3

Query: 99  PKHQPSCNRVSRCCSVKQGLCC 164
           PK  P C  VS CCSV  G CC
Sbjct: 31  PKCPPKCPPVSSCCSVSSGGCC 52


>sp|Q5T7P2|LCE1A_HUMAN Late cornified envelope protein 1A OS=Homo
           sapiens GN=LCE1A PE=2 SV=1
          Length = 110

 Score = 32.7 bits (73), Expect = 0.59
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +3

Query: 99  PKHQPSCNRVSRCCSVKQGLCC 164
           PK  P C  VS CCSV  G CC
Sbjct: 31  PKCPPKCPPVSSCCSVSSGGCC 52
tr_hit_id A8BCX9
Definition tr|A8BCX9|A8BCX9_GIALA ATP-dependent RNA helicase OS=Giardia lamblia ATCC 50803
Align length 40
Score (bit) 32.7
E-value 9.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914548|Adiantum capillus-veneris mRNA, clone:
YMU001_000060_B06.
         (229 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8BCX9|A8BCX9_GIALA ATP-dependent RNA helicase OS=Giardia lam...    33   9.3  
tr|A4IF40|A4IF40_HUMAN Late cornified envelope 1B OS=Homo sapien...    33   9.3  

>tr|A8BCX9|A8BCX9_GIALA ATP-dependent RNA helicase OS=Giardia
           lamblia ATCC 50803 GN=GL50803_13791 PE=4 SV=1
          Length = 625

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +1

Query: 88  LKNIQNISLLVIEFLVVVASNKAFVVDFHXESRAICSLWP 207
           ++N  N SL  IE LV+   +K   + FH E + IC+L P
Sbjct: 137 VRNTVNFSLDTIEVLVLDEGDKMLDIGFHDELKEICALCP 176


>tr|A4IF40|A4IF40_HUMAN Late cornified envelope 1B OS=Homo sapiens
           GN=LCE1B PE=4 SV=1
          Length = 118

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 13/22 (59%), Positives = 13/22 (59%)
 Frame = +3

Query: 99  PKHQPSCNRVSRCCSVKQGLCC 164
           PK  P C  VS CCSV  G CC
Sbjct: 31  PKCPPKCPPVSSCCSVSSGGCC 52