BP914561 |
Clone id |
YMU001_000060_C11 |
Library |
YMU01 |
Length |
660 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000060_C11. |
Accession |
BP914561 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL526Contig1 |
Sequence |
GATATAGTGCAGAGGGCATTGAGTTATCCCCTCAAACTCATAGCAAAGAATGCAGGGGTA AATGGCAGTGTTGTTGGGGAGAAAGTGCTTTCTAATGATGACTTCAAATTCGGCTATAAT GCGGCCACAGGAAAGTATGAAGATCTTATGGCTGCTGGCATTATCGACCCTACAAAGGTT GTAAGGTGTTGCCTTGAACATGCTGCATCCGTGGCAAAGACTTTTCTCACATCGGATGCT GTGGTCGTCGATATTAAAGAACCTGAGGTTGCTGCTCCTGTGGGAAACCCTATGGATAAT TCTGGATATGGTTATTAAGGTACTGGCTGGAAAAGGATGTAAGCCTTTTTAAAACCCGTT TCTGATGCTGATGCTCCACATTGATAGAAGTGATTGCAGATGACAGTCCTATCGCTTGGT TGCCTTAGTACGAGATATTTTTCCAATCAGCGAGCTTTAGTTAGTCAGGTACTTAGGGTG CAAAGCGGTTTTTCTGCATCTGTAATGATTGTTCTGAACCTCTTGTCAAATTGAAAGAGG GTCCTAGAATATCATGTATTCTTCAGTTTAGGCTGGATCGCTTGGAAACCTTTTTAATTG TTGCAATGAGTGCTCATTTGATTGTATGTATCGATTGGACATGCTCTTATTGATATATGG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P21240 |
Definition |
sp|P21240|RUBB_ARATH RuBisCO large subunit-binding protein subunit beta, chloroplastic OS=Arabidopsis thaliana |
Align length |
105 |
Score (bit) |
188.0 |
E-value |
2.0e-47 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6B7Q9 |
Definition |
tr|Q6B7Q9|Q6B7Q9_MAIZE RuBisCo subunit binding-protein beta subunit (Fragment) OS=Zea mays |
Align length |
105 |
Score (bit) |
189.0 |
E-value |
1.0e-46 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914561|Adiantum capillus-veneris mRNA, clone: YMU001_000060_C11. (660 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6B7Q9|Q6B7Q9_MAIZE RuBisCo subunit binding-protein beta subu... 189 1e-46 tr|Q9LWT6|Q9LWT6_ORYSJ Os06g0114000 protein OS=Oryza sativa subs... 187 4e-46 tr|A3B7Q6|A3B7Q6_ORYSJ Putative uncharacterized protein OS=Oryza... 187 4e-46 tr|Q56ZP2|Q56ZP2_ARATH RuBisCO subunit binding-protein beta subu... 184 4e-45 tr|P93570|P93570_SOLTU Chaperonin-60 beta subunit OS=Solanum tub... 183 7e-45 tr|Q6ZFJ9|Q6ZFJ9_ORYSJ Os02g0102900 protein OS=Oryza sativa subs... 182 2e-44 tr|B8AGV6|B8AGV6_ORYSI Putative uncharacterized protein OS=Oryza... 182 2e-44 tr|A3A263|A3A263_ORYSJ Putative uncharacterized protein OS=Oryza... 182 2e-44 tr|Q9LJE4|Q9LJE4_ARATH GloEL protein; chaperonin, 60 kDa OS=Arab... 181 3e-44 tr|Q0WRG9|Q0WRG9_ARATH RuBisCO subunit binding-protein beta subu... 181 4e-44 tr|A9NV22|A9NV22_PICSI Putative uncharacterized protein OS=Picea... 181 4e-44 tr|Q0W9E2|Q0W9E2_SOLCO Beta chaperonin 60 OS=Solanum commersonii... 180 6e-44 tr|A9PF58|A9PF58_POPTR Putative uncharacterized protein OS=Popul... 180 8e-44 tr|Q9FHA9|Q9FHA9_ARATH RuBisCO subunit binding-protein beta subu... 178 3e-43 tr|A7P765|A7P765_VITVI Chromosome chr9 scaffold_7, whole genome ... 177 5e-43 tr|A7P0B1|A7P0B1_VITVI Chromosome chr6 scaffold_3, whole genome ... 169 2e-40 tr|A9TNZ2|A9TNZ2_PHYPA Predicted protein OS=Physcomitrella paten... 168 2e-40 tr|A9RLL2|A9RLL2_PHYPA Predicted protein OS=Physcomitrella paten... 166 1e-39 tr|A9RKJ5|A9RKJ5_PHYPA Predicted protein OS=Physcomitrella paten... 158 3e-37 tr|B6THN2|B6THN2_MAIZE RuBisCO large subunit-binding protein sub... 157 7e-37 tr|B6SH83|B6SH83_MAIZE RuBisCO large subunit-binding protein sub... 157 7e-37 tr|A4S076|A4S076_OSTLU Chaperonin 60 beta chain, chloroplast OS=... 147 7e-34 tr|A7PNB9|A7PNB9_VITVI Chromosome chr1 scaffold_22, whole genome... 144 5e-33 tr|Q015D7|Q015D7_OSTTA RUBISCO SUBUNIT BINDING-PROTEIN BETA-2 SU... 135 2e-30 tr|Q9C667|Q9C667_ARATH Chaperonin, putative OS=Arabidopsis thali... 131 3e-29 tr|Q56XN6|Q56XN6_ARATH Chaperonin OS=Arabidopsis thaliana GN=At1... 131 3e-29 tr|B8BJN0|B8BJN0_ORYSI Putative uncharacterized protein OS=Oryza... 128 3e-28 tr|A3AU66|A3AU66_ORYSJ Putative uncharacterized protein OS=Oryza... 128 3e-28 tr|A8ITH8|A8ITH8_CHLRE Chaperonin 60B2 OS=Chlamydomonas reinhard... 119 2e-25 tr|A8JE91|A8JE91_CHLRE Chaperonin 60B1 OS=Chlamydomonas reinhard... 115 2e-24
>tr|Q6B7Q9|Q6B7Q9_MAIZE RuBisCo subunit binding-protein beta subunit (Fragment) OS=Zea mays PE=2 SV=1 Length = 409
Score = 189 bits (480), Expect = 1e-46 Identities = 95/105 (90%), Positives = 100/105 (95%) Frame = +1
Query: 1 DIVQRALSYPLKLIAKNAGVNGSVVGEKVLSNDDFKFGYNAATGKYEDLMAAGIIDPTKV 180 +IV+RALSYPLKLIAKNAGVNGSVV EKVLSND+FK+GYNAATG+YEDLMAAGIIDPTKV Sbjct: 306 EIVRRALSYPLKLIAKNAGVNGSVVTEKVLSNDNFKYGYNAATGQYEDLMAAGIIDPTKV 365
Query: 181 VRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAPVGNPMDNSGYGY 315 VRCCLEHAASVAKTFLTSD VVVDIKEPE A PV NPMDNSGYGY Sbjct: 366 VRCCLEHAASVAKTFLTSDVVVVDIKEPE-ATPVANPMDNSGYGY 409
>tr|Q9LWT6|Q9LWT6_ORYSJ Os06g0114000 protein OS=Oryza sativa subsp. japonica GN=P0541H01.20 PE=2 SV=1 Length = 601
Score = 187 bits (476), Expect = 4e-46 Identities = 95/105 (90%), Positives = 100/105 (95%) Frame = +1
Query: 1 DIVQRALSYPLKLIAKNAGVNGSVVGEKVLSNDDFKFGYNAATGKYEDLMAAGIIDPTKV 180 +IV+RALSYPLKLIAKNAGVNGSVV EKVLSND+FKFGYNAATG+YEDLMAAGIIDPTKV Sbjct: 498 EIVRRALSYPLKLIAKNAGVNGSVVTEKVLSNDNFKFGYNAATGQYEDLMAAGIIDPTKV 557
Query: 181 VRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAPVGNPMDNSGYGY 315 VRCCLEHAASVAKTFLTSD VVV+IKEPE APV NPMDNSGYGY Sbjct: 558 VRCCLEHAASVAKTFLTSDVVVVEIKEPE-PAPVTNPMDNSGYGY 601
>tr|A3B7Q6|A3B7Q6_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_019078 PE=3 SV=1 Length = 609
Score = 187 bits (476), Expect = 4e-46 Identities = 95/105 (90%), Positives = 100/105 (95%) Frame = +1
Query: 1 DIVQRALSYPLKLIAKNAGVNGSVVGEKVLSNDDFKFGYNAATGKYEDLMAAGIIDPTKV 180 +IV+RALSYPLKLIAKNAGVNGSVV EKVLSND+FKFGYNAATG+YEDLMAAGIIDPTKV Sbjct: 506 EIVRRALSYPLKLIAKNAGVNGSVVTEKVLSNDNFKFGYNAATGQYEDLMAAGIIDPTKV 565
Query: 181 VRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAPVGNPMDNSGYGY 315 VRCCLEHAASVAKTFLTSD VVV+IKEPE APV NPMDNSGYGY Sbjct: 566 VRCCLEHAASVAKTFLTSDVVVVEIKEPE-PAPVTNPMDNSGYGY 609
>tr|Q56ZP2|Q56ZP2_ARATH RuBisCO subunit binding-protein beta subunit (Fragment) OS=Arabidopsis thaliana GN=At5g56500 PE=2 SV=1 Length = 173
Score = 184 bits (467), Expect = 4e-45 Identities = 91/105 (86%), Positives = 98/105 (93%) Frame = +1
Query: 1 DIVQRALSYPLKLIAKNAGVNGSVVGEKVLSNDDFKFGYNAATGKYEDLMAAGIIDPTKV 180 DIV++ALSYPLKLIAKNAGVNGSVV EKVLS+D+ K GYNAATGKYEDLMAAGIIDPTKV Sbjct: 69 DIVKKALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKHGYNAATGKYEDLMAAGIIDPTKV 128
Query: 181 VRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAPVGNPMDNSGYGY 315 VRCCLEHA+SVAKTFL SD VVV+IKEPE AAP GNPMDNSGYG+ Sbjct: 129 VRCCLEHASSVAKTFLMSDCVVVEIKEPESAAPAGNPMDNSGYGF 173
>tr|P93570|P93570_SOLTU Chaperonin-60 beta subunit OS=Solanum tuberosum PE=2 SV=1 Length = 599
Score = 183 bits (465), Expect = 7e-45 Identities = 94/105 (89%), Positives = 97/105 (92%) Frame = +1
Query: 1 DIVQRALSYPLKLIAKNAGVNGSVVGEKVLSNDDFKFGYNAATGKYEDLMAAGIIDPTKV 180 DIV+RALSYPLKLIAKNAGVNGSVV EKVLS+DD KFGYNAATG YEDLMAAGIIDPTKV Sbjct: 496 DIVKRALSYPLKLIAKNAGVNGSVVSEKVLSSDDPKFGYNAATGNYEDLMAAGIIDPTKV 555
Query: 181 VRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAPVGNPMDNSGYGY 315 VRCCLEHAASVAKTFL SD VVV+IKEPE AA GNPMDNSGYGY Sbjct: 556 VRCCLEHAASVAKTFLMSDCVVVEIKEPE-AAVAGNPMDNSGYGY 599
>tr|Q6ZFJ9|Q6ZFJ9_ORYSJ Os02g0102900 protein OS=Oryza sativa subsp. japonica GN=OJ1435_F07.26 PE=1 SV=1 Length = 598
Score = 182 bits (461), Expect = 2e-44 Identities = 88/105 (83%), Positives = 99/105 (94%) Frame = +1
Query: 1 DIVQRALSYPLKLIAKNAGVNGSVVGEKVLSNDDFKFGYNAATGKYEDLMAAGIIDPTKV 180 +IV+++LSYPLKLIAKNAGVNGSVV EKVL+ND+F++GYNAATGKYEDLMAAGIIDPTKV Sbjct: 494 EIVRKSLSYPLKLIAKNAGVNGSVVTEKVLANDNFRYGYNAATGKYEDLMAAGIIDPTKV 553
Query: 181 VRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAPVGNPMDNSGYGY 315 VRCCLEHAASVAKTF+TSDAVVVDIKEPE AA GNPM SG+G+ Sbjct: 554 VRCCLEHAASVAKTFITSDAVVVDIKEPEKAAAAGNPMGGSGFGF 598
>tr|B8AGV6|B8AGV6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_05469 PE=4 SV=1 Length = 598
Score = 182 bits (461), Expect = 2e-44 Identities = 88/105 (83%), Positives = 99/105 (94%) Frame = +1
Query: 1 DIVQRALSYPLKLIAKNAGVNGSVVGEKVLSNDDFKFGYNAATGKYEDLMAAGIIDPTKV 180 +IV+++LSYPLKLIAKNAGVNGSVV EKVL+ND+F++GYNAATGKYEDLMAAGIIDPTKV Sbjct: 494 EIVRKSLSYPLKLIAKNAGVNGSVVTEKVLANDNFRYGYNAATGKYEDLMAAGIIDPTKV 553
Query: 181 VRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAPVGNPMDNSGYGY 315 VRCCLEHAASVAKTF+TSDAVVVDIKEPE AA GNPM SG+G+ Sbjct: 554 VRCCLEHAASVAKTFITSDAVVVDIKEPEKAAAAGNPMGGSGFGF 598
>tr|A3A263|A3A263_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_004885 PE=3 SV=1 Length = 616
Score = 182 bits (461), Expect = 2e-44 Identities = 88/105 (83%), Positives = 99/105 (94%) Frame = +1
Query: 1 DIVQRALSYPLKLIAKNAGVNGSVVGEKVLSNDDFKFGYNAATGKYEDLMAAGIIDPTKV 180 +IV+++LSYPLKLIAKNAGVNGSVV EKVL+ND+F++GYNAATGKYEDLMAAGIIDPTKV Sbjct: 512 EIVRKSLSYPLKLIAKNAGVNGSVVTEKVLANDNFRYGYNAATGKYEDLMAAGIIDPTKV 571
Query: 181 VRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAPVGNPMDNSGYGY 315 VRCCLEHAASVAKTF+TSDAVVVDIKEPE AA GNPM SG+G+ Sbjct: 572 VRCCLEHAASVAKTFITSDAVVVDIKEPEKAAAAGNPMGGSGFGF 616
>tr|Q9LJE4|Q9LJE4_ARATH GloEL protein; chaperonin, 60 kDa OS=Arabidopsis thaliana GN=At3g13470 PE=3 SV=1 Length = 596
Score = 181 bits (460), Expect = 3e-44 Identities = 91/105 (86%), Positives = 96/105 (91%) Frame = +1
Query: 1 DIVQRALSYPLKLIAKNAGVNGSVVGEKVLSNDDFKFGYNAATGKYEDLMAAGIIDPTKV 180 +IV+RALSYPLKLIAKNAGVNGSVV EKVL+ND+ KFGYNAATGKYEDLMAAGIIDPTKV Sbjct: 493 EIVKRALSYPLKLIAKNAGVNGSVVSEKVLANDNVKFGYNAATGKYEDLMAAGIIDPTKV 552
Query: 181 VRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAPVGNPMDNSGYGY 315 VRCCLEHAASVAKTFL SD VVV+I EPE P GNPMDNSGYGY Sbjct: 553 VRCCLEHAASVAKTFLMSDCVVVEIPEPE-PVPAGNPMDNSGYGY 596
>tr|Q0WRG9|Q0WRG9_ARATH RuBisCO subunit binding-protein beta subunit OS=Arabidopsis thaliana GN=At5g56500 PE=2 SV=1 Length = 597
Score = 181 bits (459), Expect = 4e-44 Identities = 90/105 (85%), Positives = 97/105 (92%) Frame = +1
Query: 1 DIVQRALSYPLKLIAKNAGVNGSVVGEKVLSNDDFKFGYNAATGKYEDLMAAGIIDPTKV 180 DIV++ALSYPLKLIAKNAGVNGSVV EKVLS+D+ K GYNAATGKYEDLMAA IIDPTKV Sbjct: 493 DIVKKALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKHGYNAATGKYEDLMAARIIDPTKV 552
Query: 181 VRCCLEHAASVAKTFLTSDAVVVDIKEPEVAAPVGNPMDNSGYGY 315 VRCCLEHA+SVAKTFL SD VVV+IKEPE AAP GNPMDNSGYG+ Sbjct: 553 VRCCLEHASSVAKTFLMSDCVVVEIKEPESAAPAGNPMDNSGYGF 597
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