BP914562 |
Clone id |
YMU001_000060_C12 |
Library |
YMU01 |
Length |
645 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000060_C12. |
Accession |
BP914562 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3885Contig1 |
Sequence |
TGCACACAAAGTGAACGGCAATTTTCAGCTTCGCTCAAAATTGCAGAAGCTACAGTCGGT CACTCAGTTCACAGATCCTCCATTGCTTCGGCTGGAAAGTGAATCCTATCAGATATATCT GACCCTGCTACAGCGATTACCGCTAGATAAGCCAGATCTTGCGAAAGACGTGGAGGTTGA AAGTAGGCTAGTAGAGCTTTGTGAAGAGGTTCTACAGGTGTATTTAAACACGGCTACAGC AGGTCCTTATCATAGTCTGCATCTAACAGAACAGCCTGCAACTGGAAGTGGTTGGAAAAT CCCAATAGGTTCTTCAAGGAGACGAGAATTAGCATCTCGAGGTCCTTTGGTCGTGGCTAC TTTGCAAGCGATCAGCGGGCTAAAAGACGACACTGTTGAAAAATACTTAAAACAATTCTT TCCTCTCCTTGCAAGCTTGATCAGCTGTGAACATGGTTCAGGAGATGTTCTACTAGCTTT AAGCAATATGTTTAGTACTTGGATTGGTCCTATTGTACTGCGGGGAAAATGTTGAGAGCT CTGATCTTTTGCAGATCTTACCATTTTTGTAGAAATTATTAGAAATCAAAAGCTAACTGT ATATTGGGCACTAATCAATCAATTATTTCATTGTTGTTTATCAAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9P7V5 |
Definition |
sp|Q9P7V5|SEC7B_SCHPO Protein transport protein sec72 OS=Schizosaccharomyces pombe |
Align length |
176 |
Score (bit) |
37.0 |
E-value |
0.088 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9RIC5 |
Definition |
tr|A9RIC5|A9RIC5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
174 |
Score (bit) |
216.0 |
E-value |
1.0e-54 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914562|Adiantum capillus-veneris mRNA, clone: YMU001_000060_C12. (645 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9RIC5|A9RIC5_PHYPA Predicted protein OS=Physcomitrella paten... 216 1e-54 tr|A9TMD6|A9TMD6_PHYPA Predicted protein OS=Physcomitrella paten... 215 2e-54 tr|Q8S565|Q8S565_ORYSA Guanine nucleotide-exchange protein GEP2 ... 204 3e-51 tr|Q10P53|Q10P53_ORYSJ Os03g0246800 protein OS=Oryza sativa subs... 204 3e-51 tr|B8AK12|B8AK12_ORYSI Putative uncharacterized protein OS=Oryza... 204 3e-51 tr|A3AG20|A3AG20_ORYSJ Putative uncharacterized protein OS=Oryza... 204 3e-51 tr|A7PYA2|A7PYA2_VITVI Chromosome chr15 scaffold_37, whole genom... 194 4e-48 tr|Q9LZX8|Q9LZX8_ARATH Guanine nucleotide exchange factor-like p... 163 7e-39 tr|Q9LPC5|Q9LPC5_ARATH F22M8.9 protein OS=Arabidopsis thaliana G... 152 2e-35 tr|A7P8T5|A7P8T5_VITVI Chromosome chr3 scaffold_8, whole genome ... 147 5e-34 tr|A5BCF2|A5BCF2_VITVI Putative uncharacterized protein OS=Vitis... 147 5e-34 tr|Q9SZM0|Q9SZM0_ARATH Guanine nucleotide-exchange protein-like"... 121 3e-26 tr|Q0WUF1|Q0WUF1_ARATH Guanine nucleotide-exchange protein-like ... 121 3e-26 tr|Q7F8R6|Q7F8R6_ORYSJ Putative guanine nucleotide-exchange prot... 120 5e-26 tr|Q0E352|Q0E352_ORYSJ Os02g0193800 protein (Fragment) OS=Oryza ... 120 5e-26 tr|B8AJA2|B8AJA2_ORYSI Putative uncharacterized protein OS=Oryza... 120 5e-26 tr|B7F1A4|B7F1A4_ORYSJ cDNA clone:002-143-A05, full insert seque... 120 5e-26 tr|Q69XU9|Q69XU9_ORYSJ Putative guanine nucleotide-exchange prot... 119 2e-25 tr|Q0DAV8|Q0DAV8_ORYSJ Os06g0622800 protein (Fragment) OS=Oryza ... 119 2e-25 tr|B7EZC9|B7EZC9_ORYSJ cDNA clone:002-103-F09, full insert seque... 119 2e-25 tr|B8B4P5|B8B4P5_ORYSI Putative uncharacterized protein OS=Oryza... 117 5e-25 tr|A3A429|A3A429_ORYSJ Putative uncharacterized protein OS=Oryza... 114 4e-24 tr|O65490|O65490_ARATH Putative uncharacterized protein AT4g3538... 108 4e-22 tr|A3BDN8|A3BDN8_ORYSJ Putative uncharacterized protein OS=Oryza... 96 1e-18 tr|B2B011|B2B011_PODAN Predicted CDS Pa_3_2320 OS=Podospora anse... 56 2e-06 tr|A8J189|A8J189_CHLRE SEC7/BIG-like ARF-guanine nucleotide exch... 55 4e-06 tr|Q9LXK4|Q9LXK4_ARATH Guanine nucleotide-exchange-like protein ... 54 8e-06 tr|Q0WM86|Q0WM86_ARATH Guanine nucleotide-exchange-like protein ... 54 8e-06 tr|Q1DW55|Q1DW55_COCIM Putative uncharacterized protein OS=Cocci... 52 4e-05 tr|B2W5N5|B2W5N5_PYRTR Protein transport protein sec72 OS=Pyreno... 51 5e-05
>tr|A9RIC5|A9RIC5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_175154 PE=4 SV=1 Length = 1755
Score = 216 bits (550), Expect = 1e-54 Identities = 112/174 (64%), Positives = 137/174 (78%) Frame = +2
Query: 2 AHKVNGNFQLRSKLQKLQSVTQFTDPPLLRLESESYQIYLTLLQRLPLDKPDLAKDVEVE 181 AHKVNG+ LR +LQ+L+ + DPPLLRLESE+YQ YL +LQ LP+DKP LAKDVEVE Sbjct: 1592 AHKVNGDHALRQQLQELRLMP---DPPLLRLESEAYQAYLAMLQHLPMDKPSLAKDVEVE 1648
Query: 182 SRLVELCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVAT 361 +RLVELCEEVLQ+Y++ +T+ T+ W IP+GS+RRREL SR PLVVAT Sbjct: 1649 TRLVELCEEVLQLYISISTS--------TDDSIQKPKWVIPLGSARRRELVSRAPLVVAT 1700
Query: 362 LQAISGLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 523 LQA+SGLKD + E+YL +FFPLLA LISCEHGSG+V LALS+MFS WIGPI+L+ Sbjct: 1701 LQAVSGLKDASFEQYLVRFFPLLAGLISCEHGSGEVQLALSDMFSNWIGPILLQ 1754
>tr|A9TMD6|A9TMD6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_223615 PE=4 SV=1 Length = 1749
Score = 215 bits (547), Expect = 2e-54 Identities = 110/176 (62%), Positives = 138/176 (78%) Frame = +2
Query: 2 AHKVNGNFQLRSKLQKLQSVTQFTDPPLLRLESESYQIYLTLLQRLPLDKPDLAKDVEVE 181 AHKVNG+ LR +LQ+L+ + DPPLLRLESE+YQ YL +LQ LP+DKP LAKDVEVE Sbjct: 1584 AHKVNGDHALRQQLQELRLMP---DPPLLRLESEAYQAYLAMLQHLPMDKPSLAKDVEVE 1640
Query: 182 SRLVELCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVAT 361 +RL+ELCEEVL++Y+ +T+ T++ W +P+GSSRRREL SR PLVVAT Sbjct: 1641 TRLIELCEEVLRLYIAISTS--------TDESIQKPRWVVPLGSSRRRELVSRAPLVVAT 1692
Query: 362 LQAISGLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLRGK 529 LQA+SGLKD + E+YL +FFPLLA LISCEHGSG+V LALS+MFS WIGPI+L+ + Sbjct: 1693 LQAVSGLKDASFEQYLVRFFPLLAGLISCEHGSGEVQLALSDMFSNWIGPILLQAQ 1748
>tr|Q8S565|Q8S565_ORYSA Guanine nucleotide-exchange protein GEP2 OS=Oryza sativa GN=GEP2 PE=2 SV=1 Length = 1789
Score = 204 bits (520), Expect = 3e-51 Identities = 107/174 (61%), Positives = 132/174 (75%) Frame = +2
Query: 2 AHKVNGNFQLRSKLQKLQSVTQFTDPPLLRLESESYQIYLTLLQRLPLDKPDLAKDVEVE 181 AHK+N + LRSKLQ+L S+TQ DPPLLRLE+ESYQ+ LT+LQ + LD+ + VEVE Sbjct: 1619 AHKINSDNDLRSKLQELGSMTQMQDPPLLRLENESYQLCLTILQNICLDRSPNERSVEVE 1678
Query: 182 SRLVELCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVAT 361 S LV LC+EVL+VYL+TA L+ P W IP+GSS+RRELA+R PLVV+T Sbjct: 1679 SHLVGLCKEVLEVYLSTANPS-----QLSGAPQPLGHWLIPVGSSKRRELAARAPLVVST 1733
Query: 362 LQAISGLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 523 LQAISGL D + EK L QFFPLLA LISCEHGS +V +ALS+MFSTW+GP+VL+ Sbjct: 1734 LQAISGLGDSSFEKNLGQFFPLLAGLISCEHGSSEVQVALSDMFSTWVGPVVLQ 1787
>tr|Q10P53|Q10P53_ORYSJ Os03g0246800 protein OS=Oryza sativa subsp. japonica GN=Os03g0246800 PE=4 SV=1 Length = 1789
Score = 204 bits (520), Expect = 3e-51 Identities = 107/174 (61%), Positives = 132/174 (75%) Frame = +2
Query: 2 AHKVNGNFQLRSKLQKLQSVTQFTDPPLLRLESESYQIYLTLLQRLPLDKPDLAKDVEVE 181 AHK+N + LRSKLQ+L S+TQ DPPLLRLE+ESYQ+ LT+LQ + LD+ + VEVE Sbjct: 1619 AHKINSDNDLRSKLQELGSMTQMQDPPLLRLENESYQLCLTILQNICLDRSPNERSVEVE 1678
Query: 182 SRLVELCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVAT 361 S LV LC+EVL+VYL+TA L+ P W IP+GSS+RRELA+R PLVV+T Sbjct: 1679 SHLVGLCKEVLEVYLSTANPS-----QLSGAPQPLGHWLIPVGSSKRRELAARAPLVVST 1733
Query: 362 LQAISGLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 523 LQAISGL D + EK L QFFPLLA LISCEHGS +V +ALS+MFSTW+GP+VL+ Sbjct: 1734 LQAISGLGDSSFEKNLGQFFPLLAGLISCEHGSSEVQVALSDMFSTWVGPVVLQ 1787
>tr|B8AK12|B8AK12_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_10738 PE=4 SV=1 Length = 1789
Score = 204 bits (520), Expect = 3e-51 Identities = 107/174 (61%), Positives = 132/174 (75%) Frame = +2
Query: 2 AHKVNGNFQLRSKLQKLQSVTQFTDPPLLRLESESYQIYLTLLQRLPLDKPDLAKDVEVE 181 AHK+N + LRSKLQ+L S+TQ DPPLLRLE+ESYQ+ LT+LQ + LD+ + VEVE Sbjct: 1619 AHKINSDNDLRSKLQELGSMTQMQDPPLLRLENESYQLCLTILQNICLDRSPNERSVEVE 1678
Query: 182 SRLVELCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVAT 361 S LV LC+EVL+VYL+TA L+ P W IP+GSS+RRELA+R PLVV+T Sbjct: 1679 SHLVGLCKEVLEVYLSTANPS-----QLSGAPQPLGHWLIPVGSSKRRELAARAPLVVST 1733
Query: 362 LQAISGLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 523 LQAISGL D + EK L QFFPLLA LISCEHGS +V +ALS+MFSTW+GP+VL+ Sbjct: 1734 LQAISGLGDSSFEKNLGQFFPLLAGLISCEHGSSEVQVALSDMFSTWVGPVVLQ 1787
>tr|A3AG20|A3AG20_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_009742 PE=4 SV=1 Length = 1803
Score = 204 bits (520), Expect = 3e-51 Identities = 107/174 (61%), Positives = 132/174 (75%) Frame = +2
Query: 2 AHKVNGNFQLRSKLQKLQSVTQFTDPPLLRLESESYQIYLTLLQRLPLDKPDLAKDVEVE 181 AHK+N + LRSKLQ+L S+TQ DPPLLRLE+ESYQ+ LT+LQ + LD+ + VEVE Sbjct: 1633 AHKINSDNDLRSKLQELGSMTQMQDPPLLRLENESYQLCLTILQNICLDRSPNERSVEVE 1692
Query: 182 SRLVELCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVAT 361 S LV LC+EVL+VYL+TA L+ P W IP+GSS+RRELA+R PLVV+T Sbjct: 1693 SHLVGLCKEVLEVYLSTANPS-----QLSGAPQPLGHWLIPVGSSKRRELAARAPLVVST 1747
Query: 362 LQAISGLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 523 LQAISGL D + EK L QFFPLLA LISCEHGS +V +ALS+MFSTW+GP+VL+ Sbjct: 1748 LQAISGLGDSSFEKNLGQFFPLLAGLISCEHGSSEVQVALSDMFSTWVGPVVLQ 1801
>tr|A7PYA2|A7PYA2_VITVI Chromosome chr15 scaffold_37, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026361001 PE=4 SV=1 Length = 1653
Score = 194 bits (493), Expect = 4e-48 Identities = 103/174 (59%), Positives = 126/174 (72%) Frame = +2
Query: 2 AHKVNGNFQLRSKLQKLQSVTQFTDPPLLRLESESYQIYLTLLQRLPLDKPDLAKDVEVE 181 AHK+N N LRSKLQ+L S+TQ DPPLLRLE+ESYQI LTLLQ L LD+P ++ EVE Sbjct: 1482 AHKINSNTILRSKLQELGSMTQMQDPPLLRLENESYQICLTLLQNLILDRPPSYEEAEVE 1541
Query: 182 SRLVELCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVAT 361 S LV+LC EVLQ Y+ TA +G L QP W IP+GS +RRELA+R PLVV T Sbjct: 1542 SYLVDLCHEVLQFYVETARSGQIPESSLGVQPR----WLIPLGSGKRRELATRAPLVVVT 1597
Query: 362 LQAISGLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 523 LQA+ GL D + E+ L QFFPLL+SLI CEHGS +V +ALS M + +GP++LR Sbjct: 1598 LQAVCGLGDTSFERNLAQFFPLLSSLIGCEHGSNEVQVALSEMLRSSVGPVLLR 1651
>tr|Q9LZX8|Q9LZX8_ARATH Guanine nucleotide exchange factor-like protein OS=Arabidopsis thaliana GN=T4C21_270 PE=4 SV=1 Length = 1793
Score = 163 bits (413), Expect = 7e-39 Identities = 88/177 (49%), Positives = 121/177 (68%), Gaps = 3/177 (1%) Frame = +2
Query: 2 AHKVNGNFQLRSKLQKLQSVTQFTDPPLLRLESESYQIYLTLLQRLPLDKP---DLAKDV 172 AH +N N LRS+LQ+L +TQ DPPLLRLE+ESYQI LT LQ L DK + ++ Sbjct: 1617 AHGINSNTILRSRLQELGPMTQMQDPPLLRLENESYQICLTFLQNLVADKTKKEEEEEEE 1676
Query: 173 EVESRLVELCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLV 352 E+ES LV +C+EVL Y+ T+++ L A+ W+IP+GS +RREL++R PL+ Sbjct: 1677 EIESLLVNICQEVLNFYIETSSSAK--KLQSESSRASEYRWRIPLGSGKRRELSARAPLI 1734
Query: 353 VATLQAISGLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 523 VATLQA+ L + + EK LK FPLLA+LISCEHGS +V AL++M +GP++L+ Sbjct: 1735 VATLQAMCTLDEASFEKNLKCLFPLLANLISCEHGSNEVQTALADMLGLSVGPVLLQ 1791
>tr|Q9LPC5|Q9LPC5_ARATH F22M8.9 protein OS=Arabidopsis thaliana GN=At1g01960 PE=4 SV=1 Length = 1750
Score = 152 bits (383), Expect = 2e-35 Identities = 79/177 (44%), Positives = 114/177 (64%) Frame = +2
Query: 2 AHKVNGNFQLRSKLQKLQSVTQFTDPPLLRLESESYQIYLTLLQRLPLDKPDLAKDVEVE 181 AHK+N + LRSKLQ+L S + + PLLRLE+ES+Q +T L L D+P + E+E Sbjct: 1585 AHKINADLLLRSKLQELGSSLESQEAPLLRLENESFQTCMTFLDNLISDQPVGYNEAEIE 1644
Query: 182 SRLVELCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVAT 361 S L+ LC EVL+ Y+N + + EQ S W +P GS +++EL +R PLVVA Sbjct: 1645 SHLISLCREVLEFYINISCS--------KEQ---SSRWAVPSGSGKKKELTARAPLVVAA 1693
Query: 362 LQAISGLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLRGKC 532 +Q + + + +K L + FPL+A+LISCEHGSG+V +ALS+M T +GP++LR C Sbjct: 1694 IQTLGNMGESLFKKNLPELFPLIATLISCEHGSGEVQVALSDMLQTSMGPVLLRSCC 1750
>tr|A7P8T5|A7P8T5_VITVI Chromosome chr3 scaffold_8, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036299001 PE=4 SV=1 Length = 1642
Score = 147 bits (371), Expect = 5e-34 Identities = 74/174 (42%), Positives = 111/174 (63%) Frame = +2
Query: 2 AHKVNGNFQLRSKLQKLQSVTQFTDPPLLRLESESYQIYLTLLQRLPLDKPDLAKDVEVE 181 AH++N L KLQK S+ + ++PP++ E+ESYQ YL LQ L +D P +A+++ +E Sbjct: 1471 AHQLNSEKMLLMKLQKACSILEISEPPVVHFENESYQNYLNFLQHLVMDNPSVAEELNIE 1530
Query: 182 SRLVELCEEVLQVYLNTATAGPYHSLHLTEQPATGSGWKIPIGSSRRRELASRGPLVVAT 361 +LV +CE++LQ+YLN A + QP W +P+GS+++ ELA+R L V+ Sbjct: 1531 QQLVGVCEKILQIYLNCAGLQNAPQKQ-SSQPVLH--WILPLGSAQKDELAARTSLAVSA 1587
Query: 362 LQAISGLKDDTVEKYLKQFFPLLASLISCEHGSGDVLLALSNMFSTWIGPIVLR 523 LQ + GL D+ KY+ QFFPLL L+ EH SGD+ LS MF + IGPI+++ Sbjct: 1588 LQVLGGLGTDSFRKYISQFFPLLVDLVRSEHSSGDIQRVLSYMFQSCIGPIIMK 1641
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