BP914572 |
Clone id |
YMU001_000060_E02 |
Library |
YMU01 |
Length |
494 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000060_E02. |
Accession |
BP914572 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
ACCATGCCTCATTAAGGTCTCCGATGACCATACACAGACTGGATGACAATGAGAAGGGTT TTGTCATGCCTCTTTGTACAGCTCAGCCTGAAGTAGTGCTTTAATGCTTTGCAGAAACAC ATCAATGTTCCATATCTTCATAAAGCATACTTGTGTCTTGCATTTGTCCAATGTTTTGTA GATCTATTATGCTTGCTCCAAGAAGAATTTGTATGCATCTGTCTCTTCCTACAAAGGAGG AAGACCTTTGTTCCAGAATGCTCGATTACCTTCACACATGGGCACCTCTAATGGTCTCGG TCCTAGTTTCCCTTTTTCTCTTTGGCATACAGCCAGGCAACTTGTATGGTTACTGTTGCC CTTTCTCTCCAGTAAGGTGATTCATACCTTAATGCTCCTTGCACCTTCGAATTTCGTAAG AAATGGCTATACAACCTTGTTACCTCCCTTAAATCCCCAGCACTGAGAGAGAATGCTTCC ACTGTGCCTAAGCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LDR2 |
Definition |
sp|Q9LDR2|CNG19_ARATH Putative cyclic nucleotide-gated ion channel 19 OS=Arabidopsis thaliana |
Align length |
60 |
Score (bit) |
82.8 |
E-value |
8.0e-16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7QJZ5 |
Definition |
tr|A7QJZ5|A7QJZ5_VITVI Chromosome undetermined scaffold_109, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
59 |
Score (bit) |
79.7 |
E-value |
7.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914572|Adiantum capillus-veneris mRNA, clone: YMU001_000060_E02. (494 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7QJZ5|A7QJZ5_VITVI Chromosome undetermined scaffold_109, who... 80 7e-14 tr|A9CRE4|A9CRE4_MALDO Cyclic nucleotide gated channel OS=Malus ... 79 9e-14 tr|A7QJZ3|A7QJZ3_VITVI Chromosome undetermined scaffold_109, who... 78 2e-13 tr|Q6ZHE3|Q6ZHE3_ORYSJ Os02g0773400 protein OS=Oryza sativa subs... 78 3e-13 tr|Q7X9R7|Q7X9R7_HORVD Putative cyclic nucleotide and calmodulin... 77 3e-13 tr|A3B9H5|A3B9H5_ORYSJ cDNA, clone: J065216G16, full insert sequ... 72 2e-11 tr|A2YAI2|A2YAI2_ORYSI Putative uncharacterized protein OS=Oryza... 72 2e-11 tr|B8A147|B8A147_MAIZE Putative uncharacterized protein OS=Zea m... 52 2e-05 tr|B6U115|B6U115_MAIZE Cyclic nucleotide-gated ion channel 2 OS=... 52 2e-05 tr|B6U9Q0|B6U9Q0_MAIZE Cyclic nucleotide-gated ion channel 2 OS=... 50 4e-05 tr|B4FW95|B4FW95_MAIZE Putative uncharacterized protein OS=Zea m... 50 4e-05 tr|B1PJP3|B1PJP3_SANAU Putative cyclic nucleotide-gated cation c... 50 8e-05 tr|Q7X9R6|Q7X9R6_HORVD Putative cyclic nucleotide and calmodulin... 49 1e-04 tr|Q4VDN3|Q4VDN3_HORVD Cyclic nucleotide-gated ion channel 4 OS=... 49 1e-04 tr|Q4VDM7|Q4VDM7_HORVD Cyclic nucleotide-gated ion channel 4 (Fr... 49 1e-04 tr|Q3E6T4|Q3E6T4_ARATH Uncharacterized protein At5g15410.2 OS=Ar... 49 1e-04 tr|Q0WUR6|Q0WUR6_ARATH Cyclic nucleotide-gated cation channel OS... 49 1e-04 tr|Q9AUV9|Q9AUV9_ORYSJ Putative cyclic nucleotide and calmodulin... 49 2e-04 tr|Q0DNE3|Q0DNE3_ORYSJ Os03g0758300 protein OS=Oryza sativa subs... 49 2e-04 tr|B8AK74|B8AK74_ORYSI Putative uncharacterized protein OS=Oryza... 49 2e-04 tr|Q60EI8|Q60EI8_ORYSJ Os05g0502000 protein OS=Oryza sativa subs... 48 2e-04 tr|A3B5L0|A3B5L0_ORYSJ Putative uncharacterized protein OS=Oryza... 48 2e-04 tr|A2Y691|A2Y691_ORYSI Putative uncharacterized protein OS=Oryza... 48 2e-04 tr|A2Y687|A2Y687_ORYSI Putative uncharacterized protein OS=Oryza... 48 2e-04 tr|A7PN22|A7PN22_VITVI Chromosome chr14 scaffold_21, whole genom... 48 3e-04 tr|A7P1E8|A7P1E8_VITVI Chromosome chr19 scaffold_4, whole genome... 47 4e-04 tr|A5C6S9|A5C6S9_VITVI Putative uncharacterized protein OS=Vitis... 47 4e-04 tr|Q5ZAU3|Q5ZAU3_ORYSJ Putative cyclic nucleotide and calmodulin... 47 6e-04 tr|Q0JIR5|Q0JIR5_ORYSJ Os01g0782700 protein OS=Oryza sativa subs... 47 6e-04 tr|A2WVR9|A2WVR9_ORYSI Putative uncharacterized protein OS=Oryza... 47 6e-04
>tr|A7QJZ5|A7QJZ5_VITVI Chromosome undetermined scaffold_109, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000866001 PE=4 SV=1 Length = 646
Score = 79.7 bits (195), Expect = 7e-14 Identities = 37/59 (62%), Positives = 43/59 (72%) Frame = -1
Query: 494 CLGTVEAFSLSAGDLREVTRLYSHFLRNSKVQGALRYESPYWRERATVTIQVAWLYAKE 318 CL VEAF L A D+ EVT ++S FLRN KVQGA+RY+SPYWR A IQVAW Y K+ Sbjct: 573 CLTNVEAFILRAADIEEVTGIFSRFLRNPKVQGAIRYQSPYWRTFAATRIQVAWRYRKK 631
>tr|A9CRE4|A9CRE4_MALDO Cyclic nucleotide gated channel OS=Malus domestica GN=CNGC PE=2 SV=1 Length = 632
Score = 79.3 bits (194), Expect = 9e-14 Identities = 37/60 (61%), Positives = 44/60 (73%) Frame = -1
Query: 494 CLGTVEAFSLSAGDLREVTRLYSHFLRNSKVQGALRYESPYWRERATVTIQVAWLYAKEK 315 CL VEAFSL A D+ EVT ++S FLR +VQGA+RYESPYWR A IQVAW Y K++ Sbjct: 547 CLTNVEAFSLRAADIEEVTSVFSRFLRKPRVQGAIRYESPYWRGLAARCIQVAWRYRKKR 606
>tr|A7QJZ3|A7QJZ3_VITVI Chromosome undetermined scaffold_109, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000864001 PE=4 SV=1 Length = 229
Score = 78.2 bits (191), Expect = 2e-13 Identities = 36/59 (61%), Positives = 42/59 (71%) Frame = -1
Query: 494 CLGTVEAFSLSAGDLREVTRLYSHFLRNSKVQGALRYESPYWRERATVTIQVAWLYAKE 318 CL VEAF L A D+ EVT ++S FLRN KVQGA+RY+SPYWR A IQV W Y K+ Sbjct: 156 CLTNVEAFILRAADIEEVTGIFSRFLRNPKVQGAIRYQSPYWRTFAATRIQVVWRYRKK 214
>tr|Q6ZHE3|Q6ZHE3_ORYSJ Os02g0773400 protein OS=Oryza sativa subsp. japonica GN=OJ1611_C08.28 PE=4 SV=1 Length = 772
Score = 77.8 bits (190), Expect = 3e-13 Identities = 37/60 (61%), Positives = 41/60 (68%) Frame = -1
Query: 494 CLGTVEAFSLSAGDLREVTRLYSHFLRNSKVQGALRYESPYWRERATVTIQVAWLYAKEK 315 CL VEAF L A DL EVT +S FLRN +VQGA+RYESPYWR A IQVAW Y + Sbjct: 680 CLTNVEAFVLRASDLEEVTSQFSRFLRNPRVQGAIRYESPYWRTIAATRIQVAWRYRNRR 739
>tr|Q7X9R7|Q7X9R7_HORVD Putative cyclic nucleotide and calmodulin-regulated ion channel protein (Fragment) OS=Hordeum vulgare var. distichum PE=2 SV=1 Length = 181
Score = 77.4 bits (189), Expect = 3e-13 Identities = 36/60 (60%), Positives = 42/60 (70%) Frame = -1
Query: 494 CLGTVEAFSLSAGDLREVTRLYSHFLRNSKVQGALRYESPYWRERATVTIQVAWLYAKEK 315 CL VEAF L A DL +VT ++ FLRN +VQGA+RYESPYWR A IQVAW Y K + Sbjct: 91 CLTNVEAFVLRASDLEQVTAQFARFLRNPRVQGAIRYESPYWRTIAAARIQVAWRYRKRR 150
>tr|A3B9H5|A3B9H5_ORYSJ cDNA, clone: J065216G16, full insert sequence OS=Oryza sativa subsp. japonica GN=OsJ_019697 PE=2 SV=1 Length = 735
Score = 71.6 bits (174), Expect = 2e-11 Identities = 35/60 (58%), Positives = 39/60 (65%) Frame = -1
Query: 494 CLGTVEAFSLSAGDLREVTRLYSHFLRNSKVQGALRYESPYWRERATVTIQVAWLYAKEK 315 CL VEAF L A DL EVT +S FLRN V G +RYESPYW+ A IQVAW Y K + Sbjct: 666 CLTNVEAFVLRARDLEEVTSQFSRFLRNPLVLGTIRYESPYWKNLAANRIQVAWRYRKRR 725
>tr|A2YAI2|A2YAI2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_22098 PE=4 SV=1 Length = 735
Score = 71.6 bits (174), Expect = 2e-11 Identities = 35/60 (58%), Positives = 39/60 (65%) Frame = -1
Query: 494 CLGTVEAFSLSAGDLREVTRLYSHFLRNSKVQGALRYESPYWRERATVTIQVAWLYAKEK 315 CL VEAF L A DL EVT +S FLRN V G +RYESPYW+ A IQVAW Y K + Sbjct: 666 CLTNVEAFVLRARDLEEVTSQFSRFLRNPLVLGTIRYESPYWKNLAANRIQVAWRYRKRR 725
>tr|B8A147|B8A147_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 483
Score = 52.0 bits (123), Expect = 2e-05 Identities = 25/60 (41%), Positives = 36/60 (60%) Frame = -1
Query: 491 LGTVEAFSLSAGDLREVTRLYSHFLRNSKVQGALRYESPYWRERATVTIQVAWLYAKEKK 312 L + EAF L A D++ VT+ + + N KV+ + RY SP WR A V +Q+AW K +K Sbjct: 381 LESTEAFGLDAADVKYVTQHFRYTFTNDKVRRSARYYSPGWRTWAAVAVQLAWRRYKHRK 440
>tr|B6U115|B6U115_MAIZE Cyclic nucleotide-gated ion channel 2 OS=Zea mays PE=2 SV=1 Length = 484
Score = 52.0 bits (123), Expect = 2e-05 Identities = 25/60 (41%), Positives = 36/60 (60%) Frame = -1
Query: 491 LGTVEAFSLSAGDLREVTRLYSHFLRNSKVQGALRYESPYWRERATVTIQVAWLYAKEKK 312 L + EAF L A D++ VT+ + + N KV+ + RY SP WR A V +Q+AW K +K Sbjct: 382 LESTEAFGLDAADVKYVTQHFRYTFTNDKVRRSARYYSPGWRTWAAVAVQLAWRRYKHRK 441
>tr|B6U9Q0|B6U9Q0_MAIZE Cyclic nucleotide-gated ion channel 2 OS=Zea mays PE=2 SV=1 Length = 504
Score = 50.4 bits (119), Expect = 4e-05 Identities = 24/60 (40%), Positives = 35/60 (58%) Frame = -1
Query: 491 LGTVEAFSLSAGDLREVTRLYSHFLRNSKVQGALRYESPYWRERATVTIQVAWLYAKEKK 312 L + E F L A D++ VT+ + + N KV+ + RY SP WR A V +Q+AW K +K Sbjct: 402 LESTEVFGLDAADVKYVTQHFRYTFTNDKVRRSARYYSPGWRTWAAVAVQLAWRRYKHRK 461
|