NBDC - アーカイブトップ - ヘルプ
データベースの説明 | データ項目の説明 | ダウンロード | 利用許諾 | ヘルプ
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
Description of this DB | Description of data items | Download | License
AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914575
Clone id YMU001_000060_E08
Library
Length 281
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000060_E08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AAAGTTCAGTTTTCAAAGGGAAAGGTCTGGATGCCTTTGTGCGCAGATATAAGGAGTCTG
GGTCGGGACCACTGGGCGCCAACCAAGNCTTCCTGNCCGCCNAAGNNCAATCAATTCACC
CGCGATGAGTTTTTACAGTGCAAGAAATGTTTGAAAAGGCGCCGCTTTCGAAGGAAAACC
AAAGAGGAGTGCCAGCTGTTTCATGAAGCTTCCATGAACCCAGAGTGGGAATGCTCGAAC
TATCCATTTGAGAGTTTTAGTTCATGCCAGGATGAGGAAGA
■■Homology search results ■■ -
sp_hit_id Q8GZA8
Definition sp|Q8GZA8|ULT1_ARATH Protein ULTRAPETALA 1 OS=Arabidopsis thaliana
Align length 53
Score (bit) 45.1
E-value 0.0001
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914575|Adiantum capillus-veneris mRNA, clone:
YMU001_000060_E08.
         (281 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8GZA8|ULT1_ARATH Protein ULTRAPETALA 1 OS=Arabidopsis thalia...    45   1e-04
sp|Q8S8I2|ULT2_ARATH Protein ULTRAPETALA 2 OS=Arabidopsis thalia...    43   4e-04

>sp|Q8GZA8|ULT1_ARATH Protein ULTRAPETALA 1 OS=Arabidopsis thaliana
           GN=ULT1 PE=1 SV=1
          Length = 237

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 18/53 (33%), Positives = 30/53 (56%)
 Frame = +1

Query: 121 RDEFLQCXXXXXXXXXXXXXXEECQLFHEASMNPEWECSNYPFESFSSCQDEE 279
           RDEF+ C              +EC+L H A  +P W+CS++P++   +C++EE
Sbjct: 136 RDEFVGCNDCGKERRFRLRSRDECRLHHNAMGDPNWKCSDFPYDKI-TCEEEE 187


>sp|Q8S8I2|ULT2_ARATH Protein ULTRAPETALA 2 OS=Arabidopsis thaliana
           GN=ULT2 PE=2 SV=1
          Length = 228

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 17/53 (32%), Positives = 28/53 (52%)
 Frame = +1

Query: 121 RDEFLQCXXXXXXXXXXXXXXEECQLFHEASMNPEWECSNYPFESFSSCQDEE 279
           RDEF+ C               EC++ H+A   P W+C +YP++   +C++EE
Sbjct: 126 RDEFVGCSTCGKERRFRLRSRGECRMHHDAIAEPNWKCCDYPYDKI-TCEEEE 177
tr_hit_id Q0V807
Definition tr|Q0V807|Q0V807_ARATH At4g28190 OS=Arabidopsis thaliana
Align length 53
Score (bit) 45.1
E-value 0.002
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914575|Adiantum capillus-veneris mRNA, clone:
YMU001_000060_E08.
         (281 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q0V807|Q0V807_ARATH At4g28190 OS=Arabidopsis thaliana PE=2 SV=1     45   0.002
tr|A9P928|A9P928_POPTR Putative uncharacterized protein OS=Popul...    42   0.012
tr|A5AI33|A5AI33_VITVI Putative uncharacterized protein (Chromos...    42   0.012
tr|A5ADR3|A5ADR3_VITVI Putative uncharacterized protein OS=Vitis...    40   0.045
tr|Q5ZAW0|Q5ZAW0_ORYSJ Putative uncharacterized protein B1100D10...    40   0.077
tr|B8AAF4|B8AAF4_ORYSI Putative uncharacterized protein OS=Oryza...    40   0.077
tr|A2ZYF6|A2ZYF6_ORYSJ Putative uncharacterized protein OS=Oryza...    40   0.077
tr|B8AZR1|B8AZR1_ORYSI Putative uncharacterized protein OS=Oryza...    38   0.22 
tr|A3B5L3|A3B5L3_ORYSJ Putative uncharacterized protein OS=Oryza...    38   0.22 
tr|B6TJ26|B6TJ26_MAIZE Putative uncharacterized protein OS=Zea m...    36   1.1  
tr|B4FUG4|B4FUG4_MAIZE Putative uncharacterized protein OS=Zea m...    35   1.4  
tr|B6U2U6|B6U2U6_MAIZE Putative uncharacterized protein OS=Zea m...    33   5.5  

>tr|Q0V807|Q0V807_ARATH At4g28190 OS=Arabidopsis thaliana PE=2 SV=1
          Length = 237

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 18/53 (33%), Positives = 30/53 (56%)
 Frame = +1

Query: 121 RDEFLQCXXXXXXXXXXXXXXEECQLFHEASMNPEWECSNYPFESFSSCQDEE 279
           RDEF+ C              +EC+L H A  +P W+CS++P++   +C++EE
Sbjct: 136 RDEFVGCNDCGKERRFRLRSRDECRLHHNAMGDPNWKCSDFPYDKI-TCEEEE 187


>tr|A9P928|A9P928_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 235

 Score = 42.4 bits (98), Expect = 0.012
 Identities = 16/53 (30%), Positives = 28/53 (52%)
 Frame = +1

Query: 121 RDEFLQCXXXXXXXXXXXXXXEECQLFHEASMNPEWECSNYPFESFSSCQDEE 279
           RDEF++C              EEC++ H+A  +  W+C++ P++  +   DEE
Sbjct: 134 RDEFVRCNKCNKERRFRLRSKEECRIHHDALADANWKCADMPYDKITCDDDEE 186


>tr|A5AI33|A5AI33_VITVI Putative uncharacterized protein (Chromosome
           chr12 scaffold_36, whole genome shotgun sequence)
           OS=Vitis vinifera GN=GSVIVT00026010001 PE=4 SV=1
          Length = 235

 Score = 42.4 bits (98), Expect = 0.012
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +1

Query: 121 RDEFLQCXXXXXXXXXXXXXXEECQLFHEASMNPEWECSNYPFESFSSCQDEE 279
           RDEF++C              EEC++ H+A  +  W+C + P++   +C+DEE
Sbjct: 134 RDEFVRCTRCNKERRFRLRSKEECRIHHDALADVNWKCPDLPYDKI-TCEDEE 185


>tr|A5ADR3|A5ADR3_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_020966 PE=4 SV=1
          Length = 214

 Score = 40.4 bits (93), Expect = 0.045
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
 Frame = +1

Query: 31  MPLCAD-IRSLGRDHWAPTKXSXPPKXNQFTRDEFLQCXXXXXXXXXXXXXXEECQLFHE 207
           +PLC   +    ++ W        PK     RDEF++C              EEC++ HE
Sbjct: 145 VPLCKTALLKYYKETWEGENGRSRPK-RAIHRDEFIRCSSCNKERRFSLRTKEECRIHHE 203

Query: 208 ASMNPEWECSN 240
           AS+N  W C++
Sbjct: 204 ASINKHWTCAS 214


>tr|Q5ZAW0|Q5ZAW0_ORYSJ Putative uncharacterized protein
           B1100D10.3-1 (Os01g0780800 protein) (Putative
           uncharacterized protein P0010B10.33-1) OS=Oryza sativa
           subsp. japonica GN=B1100D10.3-1 PE=4 SV=1
          Length = 235

 Score = 39.7 bits (91), Expect = 0.077
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +1

Query: 121 RDEFLQCXXXXXXXXXXXXXXEECQLFHEASMNPEWECSNYPFESFSSCQDEE 279
           RDEF+ C              EEC+++H+A   P W C++   +   +C DEE
Sbjct: 134 RDEFIHCTECGKERRFRLRSKEECRIYHDALAKPNWTCADLTTDRV-TCGDEE 185


>tr|B8AAF4|B8AAF4_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_03981 PE=4 SV=1
          Length = 235

 Score = 39.7 bits (91), Expect = 0.077
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +1

Query: 121 RDEFLQCXXXXXXXXXXXXXXEECQLFHEASMNPEWECSNYPFESFSSCQDEE 279
           RDEF+ C              EEC+++H+A   P W C++   +   +C DEE
Sbjct: 134 RDEFIHCTECGKERRFRLRSKEECRIYHDALAKPNWTCADLTTDRV-TCGDEE 185


>tr|A2ZYF6|A2ZYF6_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_003578 PE=4 SV=1
          Length = 248

 Score = 39.7 bits (91), Expect = 0.077
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +1

Query: 121 RDEFLQCXXXXXXXXXXXXXXEECQLFHEASMNPEWECSNYPFESFSSCQDEE 279
           RDEF+ C              EEC+++H+A   P W C++   +   +C DEE
Sbjct: 147 RDEFIHCTECGKERRFRLRSKEECRIYHDALAKPNWTCADLTTDRV-TCGDEE 198


>tr|B8AZR1|B8AZR1_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_20523 PE=4 SV=1
          Length = 239

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = +1

Query: 121 RDEFLQCXXXXXXXXXXXXXXEECQLFHEASMNPEWECSNYP----FESFSSCQDEE 279
           RDEF++C              EEC+L+H+A    +W C + P         SC++EE
Sbjct: 130 RDEFVRCAGCGKERRFRLRTKEECRLYHDAMARHDWTCKDMPPAGRCRVRVSCEEEE 186


>tr|A3B5L3|A3B5L3_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_018335 PE=4 SV=1
          Length = 274

 Score = 38.1 bits (87), Expect = 0.22
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = +1

Query: 121 RDEFLQCXXXXXXXXXXXXXXEECQLFHEASMNPEWECSNYP----FESFSSCQDEE 279
           RDEF++C              EEC+L+H+A    +W C + P         SC++EE
Sbjct: 130 RDEFVRCAGCGKERRFRLRTKEECRLYHDAMARHDWTCKDMPPAGRCRVRVSCEEEE 186


>tr|B6TJ26|B6TJ26_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 235

 Score = 35.8 bits (81), Expect = 1.1
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = +1

Query: 121 RDEFLQCXXXXXXXXXXXXXXEECQLFHEASMNPEWECSNYPFESFSSCQDEE 279
           RDEF+ C              EEC+++H+A     W C++   +   +C DEE
Sbjct: 134 RDEFICCAGCGKERRFRLRSKEECRVYHDALAKASWTCADLTTDRV-TCDDEE 185