BP914578 |
Clone id |
YMU001_000060_E11 |
Library |
YMU01 |
Length |
539 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000060_E11. |
Accession |
BP914578 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CCTTAAGCTAGAAAAGGAGCTGCGTTTATGAATGTGCATGAGCTGGTTTTTTTGAGTTCC TTTTGAGTGCGTCAAATGATAATGAGAAATGGACGTTCTGTTGGCATGGTGAAACTCCTG ATTTAGTCTGCAAGTCATTTGAGGGTTTAAGCTGTGTTCCAGGTTTGCACCATTCCGAAA CAACTCAGTGGACAGGTGGCAGCGGAAGACACAATTGTCAACAGGAGCCGCTGCATCAAA AAGCAAGCTTAGAGCATTCAATCAAGTTTGTGTTACTGCAGTCATTCATCTTGCATGAAC GTTATATTATGGAGTGTTTTTCCACAGAGTCCTGCATTGTTTCACTTGAGCTATCACTTA GTGTCAGTCTTGTTATGAGACATAATGGCAAGGGCTAGTTTTAGAAGTTCTGAATGCCGG CGTTCTATTCAAGGATTTTTTTTTGAAAGCGGGCAGTCAAGGGTGAAGTTAAGTGAAGGT GTAAGCATGCCTAGAGGTTGATGTTCAAGATAAGTGGCCTAGTTGTATTGTAGTCATTT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q1HE26 |
Definition |
sp|Q1HE26|SMAD4_BOVIN Mothers against decapentaplegic homolog 4 OS=Bos taurus |
Align length |
30 |
Score (bit) |
32.0 |
E-value |
2.0 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7PKD6 |
Definition |
tr|A7PKD6|A7PKD6_VITVI Chromosome chr15 scaffold_19, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
40 |
Score (bit) |
62.0 |
E-value |
2.0e-08 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914578|Adiantum capillus-veneris mRNA, clone: YMU001_000060_E11. (539 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7PKD6|A7PKD6_VITVI Chromosome chr15 scaffold_19, whole genom... 62 2e-08 tr|Q8L4B1|Q8L4B1_ORYSJ cDNA clone:001-115-F02, full insert seque... 59 2e-07 tr|B8A9B7|B8A9B7_ORYSI Putative uncharacterized protein OS=Oryza... 59 2e-07 tr|A2ZTX0|A2ZTX0_ORYSJ Putative uncharacterized protein OS=Oryza... 59 2e-07 tr|A9T926|A9T926_PHYPA Predicted protein OS=Physcomitrella paten... 57 8e-07 tr|Q9FLK0|Q9FLK0_ARATH Similarity to apoptosis antagonizing tran... 54 4e-06 tr|Q84W09|Q84W09_ARATH At5g61330 OS=Arabidopsis thaliana PE=2 SV=1 54 4e-06 tr|B6TMZ1|B6TMZ1_MAIZE Protein AATF OS=Zea mays PE=2 SV=1 50 6e-05 tr|Q00UT0|Q00UT0_OSTTA Putative apoptosis antagonizing transcrip... 40 0.078 tr|A8HUN7|A8HUN7_CHLRE Transcription factor (Fragment) OS=Chlamy... 34 4.3 tr|B4NEF6|B4NEF6_DROWI GK25297 OS=Drosophila willistoni GN=GK252... 33 7.3
>tr|A7PKD6|A7PKD6_VITVI Chromosome chr15 scaffold_19, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019119001 PE=4 SV=1 Length = 330
Score = 62.0 bits (149), Expect = 2e-08 Identities = 27/40 (67%), Positives = 35/40 (87%) Frame = +2
Query: 146 FKLCSRFAPFRNNSVDRWQRKTQLSTGAAASKSKLRAFNQ 265 +++ SR APFR+ S+D+WQRKT++STGAAA K KLRAFNQ Sbjct: 144 YQMHSRIAPFRDKSIDKWQRKTEVSTGAAAIKGKLRAFNQ 183
>tr|Q8L4B1|Q8L4B1_ORYSJ cDNA clone:001-115-F02, full insert sequence OS=Oryza sativa subsp. japonica GN=B1147B04.18 PE=2 SV=1 Length = 419
Score = 58.9 bits (141), Expect = 2e-07 Identities = 26/39 (66%), Positives = 31/39 (79%) Frame = +2
Query: 149 KLCSRFAPFRNNSVDRWQRKTQLSTGAAASKSKLRAFNQ 265 KL R PFRN+ +D+WQRKTQ++TGAAA K KL AFNQ Sbjct: 237 KLQKRITPFRNSEIDKWQRKTQVTTGAAALKGKLHAFNQ 275
>tr|B8A9B7|B8A9B7_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_02244 PE=4 SV=1 Length = 420
Score = 58.9 bits (141), Expect = 2e-07 Identities = 26/39 (66%), Positives = 31/39 (79%) Frame = +2
Query: 149 KLCSRFAPFRNNSVDRWQRKTQLSTGAAASKSKLRAFNQ 265 KL R PFRN+ +D+WQRKTQ++TGAAA K KL AFNQ Sbjct: 238 KLQKRITPFRNSEIDKWQRKTQVTTGAAALKGKLHAFNQ 276
>tr|A2ZTX0|A2ZTX0_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_001992 PE=4 SV=1 Length = 394
Score = 58.9 bits (141), Expect = 2e-07 Identities = 26/39 (66%), Positives = 31/39 (79%) Frame = +2
Query: 149 KLCSRFAPFRNNSVDRWQRKTQLSTGAAASKSKLRAFNQ 265 KL R PFRN+ +D+WQRKTQ++TGAAA K KL AFNQ Sbjct: 212 KLQKRITPFRNSEIDKWQRKTQVTTGAAALKGKLHAFNQ 250
>tr|A9T926|A9T926_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_89684 PE=4 SV=1 Length = 494
Score = 56.6 bits (135), Expect = 8e-07 Identities = 25/36 (69%), Positives = 30/36 (83%) Frame = +2
Query: 158 SRFAPFRNNSVDRWQRKTQLSTGAAASKSKLRAFNQ 265 S P+RN+SVDRWQRKTQL+TGAAA K + +AFNQ Sbjct: 317 SSITPYRNSSVDRWQRKTQLATGAAAVKGRFQAFNQ 352
>tr|Q9FLK0|Q9FLK0_ARATH Similarity to apoptosis antagonizing transcription factor (Putative uncharacterized protein At5g61330) OS=Arabidopsis thaliana GN=At5g61330 PE=2 SV=1 Length = 436
Score = 54.3 bits (129), Expect = 4e-06 Identities = 25/38 (65%), Positives = 30/38 (78%) Frame = +2
Query: 152 LCSRFAPFRNNSVDRWQRKTQLSTGAAASKSKLRAFNQ 265 L R + FRN +VD+WQRKTQ++TGAAA K KL AFNQ Sbjct: 253 LQKRMSVFRNKAVDKWQRKTQVTTGAAAIKGKLHAFNQ 290
>tr|Q84W09|Q84W09_ARATH At5g61330 OS=Arabidopsis thaliana PE=2 SV=1 Length = 436
Score = 54.3 bits (129), Expect = 4e-06 Identities = 25/38 (65%), Positives = 30/38 (78%) Frame = +2
Query: 152 LCSRFAPFRNNSVDRWQRKTQLSTGAAASKSKLRAFNQ 265 L R + FRN +VD+WQRKTQ++TGAAA K KL AFNQ Sbjct: 253 LQKRMSVFRNKAVDKWQRKTQVTTGAAAIKGKLHAFNQ 290
>tr|B6TMZ1|B6TMZ1_MAIZE Protein AATF OS=Zea mays PE=2 SV=1 Length = 289
Score = 50.4 bits (119), Expect = 6e-05 Identities = 22/39 (56%), Positives = 28/39 (71%) Frame = +2
Query: 149 KLCSRFAPFRNNSVDRWQRKTQLSTGAAASKSKLRAFNQ 265 +L +R FRN +D+W RK Q++TGAAA K KL AFNQ Sbjct: 113 RLQARITTFRNTEIDKWHRKIQVTTGAAALKGKLHAFNQ 151
>tr|Q00UT0|Q00UT0_OSTTA Putative apoptosis antagonizing transcription factor [Oryza sativa (ISS) (Fragment) OS=Ostreococcus tauri GN=Ot15g02780 PE=4 SV=1 Length = 369
Score = 40.0 bits (92), Expect = 0.078 Identities = 16/34 (47%), Positives = 24/34 (70%) Frame = +2
Query: 164 FAPFRNNSVDRWQRKTQLSTGAAASKSKLRAFNQ 265 FA +R+++ DRW RK+ +S G +S L+AFNQ Sbjct: 190 FASYRDSTCDRWHRKSTVSVGGTSSGGSLKAFNQ 223
>tr|A8HUN7|A8HUN7_CHLRE Transcription factor (Fragment) OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_143724 PE=4 SV=1 Length = 495
Score = 34.3 bits (77), Expect = 4.3 Identities = 15/33 (45%), Positives = 24/33 (72%), Gaps = 1/33 (3%) Frame = +2
Query: 170 PFRNNSVDRWQRKTQLSTGAAASKSK-LRAFNQ 265 P+R+ ++D W R+T LS+G+ A ++ LRA NQ Sbjct: 291 PYRDTALDSWHRRTVLSSGSGAMRNAGLRALNQ 323
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