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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914581
Clone id YMU001_000060_F03
Library
Length 525
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000060_F03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CTGGAAGTTGGAGGTAGGAGGTACTCCGGTTTGCAGAGCATTATCTCAGAGATTGTCCGA
TTTTATTTTATTGGGATTGGTTTGCGAGATGGAGATTTTTAGATGCCGTGTTAGGTATGG
TAGTCCATAGGTGTAGGCAGTTATTCTAGTTTTGAGAATGGCAAAATGAGAGGCACCAGC
TTAGTGGCAAACCATTATGTTAAAGACGTTGGATTTAATCTTTTATTCTTTCAGTGGTGA
CCTACATAATGGTTTCAAGTACCTTTGTAAGGCTTATATAGGAGCCTCTTACTGTACCAA
ATATTAGCCATAAATCTTGGTTGGCAATGGTCGATTGCTTTTTGGAAGATCAAAGGGTTT
GCATCCTTGATGACCATCGAAAAAATGCATACTTGAACAATGGGGACTGTTCGATGGGAT
CGTCCTCCTGCTGGGGTGGATCACCCAATGGGAAAAAGTCATTAAAGAGTGTTTCCTAGC
AATTGCAAAAAACTAGGTGAACTTGTCTGCTCCTTGGGAGAGGTC
■■Homology search results ■■ -
sp_hit_id Q89AN6
Definition sp|Q89AN6|FLHB_BUCBP Flagellar biosynthetic protein flhB OS=Buchnera aphidicola subsp. Baizongia pistaciae
Align length 38
Score (bit) 33.9
E-value 0.49
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914581|Adiantum capillus-veneris mRNA, clone:
YMU001_000060_F03.
         (525 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q89AN6|FLHB_BUCBP Flagellar biosynthetic protein flhB OS=Buch...    34   0.49 
sp|A1K454|CAPP_AZOSB Phosphoenolpyruvate carboxylase OS=Azoarcus...    30   7.0  

>sp|Q89AN6|FLHB_BUCBP Flagellar biosynthetic protein flhB
           OS=Buchnera aphidicola subsp. Baizongia pistaciae
           GN=flhB PE=3 SV=1
          Length = 382

 Score = 33.9 bits (76), Expect = 0.49
 Identities = 17/38 (44%), Positives = 20/38 (52%)
 Frame = +1

Query: 271 GLYRSLLLYQILAINLGWQWSIAFWKIKGFASLMTIEK 384
           G Y   +LY+ +A  L W W I  WKIKG     T EK
Sbjct: 329 GEYIPSVLYEAVAEVLAWVWKIRHWKIKGGVFPRTPEK 366


>sp|A1K454|CAPP_AZOSB Phosphoenolpyruvate carboxylase OS=Azoarcus
           sp. (strain BH72) GN=ppc PE=3 SV=1
          Length = 917

 Score = 30.0 bits (66), Expect = 7.0
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = -2

Query: 272 PYKGT*NHYVGHH*KNKRLNPTSLT*WFATKLVPLIL 162
           P +G+  H VGH    +RL+PT L  +F T L+  +L
Sbjct: 106 PREGSLAHAVGHALDEQRLDPTDLAAFFDTALISPVL 142
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914581|Adiantum capillus-veneris mRNA, clone:
YMU001_000060_F03.
         (525 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******