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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914590
Clone id YMU001_000060_G01
Library
Length 531
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000060_G01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
ACTGGCATGGAGTCAAATCTGCATGAGAACCGCCATTCTTGAAAAGGTTTGAGAGGCCCT
AATTCTGCAAGATTCAGGTAAATAAAACCCTAATGGCGCCTTCAAGATCTTCCAACAGCA
GGAACAATCTAAAATGAAGGTCTCGCCTTCTCAGATGATGCATAATTGTATGCAAATTTG
GAAGAACATTAAGAATGACAACAACAAACGGCACATGATTGATACCTTTAGTTATAAGGA
AGGGTACAGCAGAAAGAAAGGTGTAGGAGCTTGTGAGTGGGAAAGGCTCAAGCTTGAAGC
AAGAGGGCAATGGCAGCCTTTCTTGTCAAAGCTTTGCAGGGAGAAAGGATGGAAGTGGAG
TGCAGAAAAAGGATGCATGTGCACAGAGAGTAAGGAGGGAAGGGACCATGAAAGCAGGAC
GGTCGCGGTAATTGCTGTTGATGATGATGGCGATGGTGAGGACCTTCGTCGAGAGCTGTT
CGATTGCGTGAGTGTGGGTGTGCCGGTGTGGGTGTGTGTATATTGGTCTTT
■■Homology search results ■■ -
sp_hit_id O75077
Definition sp|O75077|ADA23_HUMAN ADAM 23 OS=Homo sapiens
Align length 114
Score (bit) 35.4
E-value 0.17
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914590|Adiantum capillus-veneris mRNA, clone:
YMU001_000060_G01.
         (531 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O75077|ADA23_HUMAN ADAM 23 OS=Homo sapiens GN=ADAM23 PE=1 SV=1      35   0.17 
sp|Q9R1V7|ADA23_MOUSE ADAM 23 OS=Mus musculus GN=Adam23 PE=2 SV=1      32   1.4  
sp|Q7XA39|RGA4_SOLBU Putative disease resistance protein RGA4 OS...    32   1.9  
sp|Q0V9A3|SPT2_XENTR Protein SPT2 homolog OS=Xenopus tropicalis ...    30   5.5  
sp|A2AQH4|BCORL_MOUSE BCoR-like protein 1 OS=Mus musculus GN=Bco...    30   7.2  
sp|A8GD62|Y1949_SERP5 Putative reductase Spro_1949 OS=Serratia p...    30   9.4  
sp|P19224|UD16_HUMAN UDP-glucuronosyltransferase 1-6 OS=Homo sap...    30   9.4  
sp|Q62392|PHLA1_MOUSE Pleckstrin homology-like domain family A m...    25   9.6  

>sp|O75077|ADA23_HUMAN ADAM 23 OS=Homo sapiens GN=ADAM23 PE=1 SV=1
          Length = 832

 Score = 35.4 bits (80), Expect = 0.17
 Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 13/114 (11%)
 Frame = +2

Query: 98  AFKIFQQQEQSKMKVSPSQMMHNCMQIWKNIKNDNNKRHMID--TFSYKEG--------Y 247
           A + + +++Q  +  +P QM+H   +  + IK   +  H+I   TF YK           
Sbjct: 349 AVETWTEKDQIDITTNPVQMLHEFSKYRQRIKQHADAVHLISRVTFHYKRSSLSYFGGVC 408

Query: 248 SRKKGVGACEWERLKLEARGQWQPFLSKLCREKGWKW---SAEKGCMCTESKEG 400
           SR +GVG  E+      A    Q     L +  G +W   S +  C CTES  G
Sbjct: 409 SRTRGVGVNEYGLPMAVA----QVLSQSLAQNLGIQWEPSSRKPKCDCTESWGG 458


>sp|Q9R1V7|ADA23_MOUSE ADAM 23 OS=Mus musculus GN=Adam23 PE=2 SV=1
          Length = 829

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 13/114 (11%)
 Frame = +2

Query: 98  AFKIFQQQEQSKMKVSPSQMMHNCMQIWKNIKNDNNKRHMID--TFSYKEG--------Y 247
           A + + +++   + ++P QM+H+  +  + IK   +  H+I   TF YK           
Sbjct: 346 AVETWTEKDHIDITINPVQMLHDFSKYRQRIKQHADAVHLISRVTFHYKRSSLSYFGGVC 405

Query: 248 SRKKGVGACEWERLKLEARGQWQPFLSKLCREKGWKW---SAEKGCMCTESKEG 400
           SR +GVG  E+      A    Q     L +  G +W   S +  C C ES  G
Sbjct: 406 SRIRGVGVNEYGLPMAVA----QVLSQSLAQNLGIQWEPSSRKPKCECIESWGG 455


>sp|Q7XA39|RGA4_SOLBU Putative disease resistance protein RGA4
            OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1
          Length = 988

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
 Frame = -3

Query: 508  HRHTHTHAIEQLSTKVLTIAIIINSNYR--DRPAFMVPSLLTLCAHASFF----CTPLPS 347
            H +T+T  +  +S      ++ I +NYR    P  M  SL  L    SFF       LP+
Sbjct: 838  HGNTNTRGLSSISNLSTLTSLRIGANYRATSLPEEMFTSLTNL-EFLSFFDFKNLKDLPT 896

Query: 346  FLPAKL*QERLPLPSCFKLEPFP 278
             L +    +RL + SC  LE FP
Sbjct: 897  SLTSLNALKRLQIESCDSLESFP 919


>sp|Q0V9A3|SPT2_XENTR Protein SPT2 homolog OS=Xenopus tropicalis
           GN=spty2d1 PE=2 SV=1
          Length = 778

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
 Frame = +3

Query: 231 VIRKGTAERKV*ELVSGKGS--SLKQEGNGSLSCQSFAGRKDGSGVQKKDACAQRVRREG 404
           V   G+  R V E  SG GS  S+++ G+GS S +S   R+ GSG       A+ VR  G
Sbjct: 438 VRESGSGSRSVRESGSGSGSARSVRESGSGSGSARSV--RESGSG----SGSARSVRESG 491

Query: 405 TMK 413
           + K
Sbjct: 492 SAK 494


>sp|A2AQH4|BCORL_MOUSE BCoR-like protein 1 OS=Mus musculus GN=Bcorl1
           PE=2 SV=1
          Length = 1781

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
 Frame = -3

Query: 364 CTPLPSFLPAKL*QERLPLPSCFKLEPFPL-----TSSYTFLSAV 245
           C+ +P  L AK  +++LPLP+  K  P P+     TSS   LS V
Sbjct: 611 CSEMPLDLSAKSNRQKLPLPNQRKTPPMPVLTPVHTSSKALLSTV 655


>sp|A8GD62|Y1949_SERP5 Putative reductase Spro_1949 OS=Serratia
           proteamaculans (strain 568) GN=Spro_1949 PE=3 SV=1
          Length = 399

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +2

Query: 155 MMHNCMQIWKNIKNDNNKRHMIDTFSYKEGYSRKKGVG 268
           + + C +IW  I NDNN   + D   YK  + R  G G
Sbjct: 341 VQNTCREIWAQI-NDNNINELTDYLGYKAEFLRLFGFG 377


>sp|P19224|UD16_HUMAN UDP-glucuronosyltransferase 1-6 OS=Homo
           sapiens GN=UGT1A6 PE=2 SV=2
          Length = 532

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
 Frame = -3

Query: 322 ERLPLPSCFKLEPFPLTSSYTF------LSAVPFLITKGINHVPFVVVILNVLPNL 173
           E L LPS +    FP +  +TF      +S +P   TK  +H+ F   + N L NL
Sbjct: 161 EYLGLPSVYLFRGFPCSLEHTFSRSPDPVSYIPRCYTKFSDHMTFSQRVANFLVNL 216


>sp|Q62392|PHLA1_MOUSE Pleckstrin homology-like domain family A
           member 1 OS=Mus musculus GN=Phlda1 PE=2 SV=1
          Length = 261

 Score = 25.4 bits (54), Expect(2) = 9.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 520 YTHPHRHTHTH 488
           Y+HPH+H H H
Sbjct: 213 YSHPHQHPHPH 223



 Score = 21.9 bits (45), Expect(2) = 9.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 381 HMHPFSALHFHPFSLQ 334
           H HP    H HP+ LQ
Sbjct: 223 HPHPHPHPHPHPYQLQ 238
tr_hit_id Q1WUH1
Definition tr|Q1WUH1|Q1WUH1_LACS1 tRNA delta(2)-isopentenylpyrophosphate transferase OS=Lactobacillus salivarius subsp. salivarius (strain UCC118)
Align length 78
Score (bit) 37.7
E-value 0.37
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914590|Adiantum capillus-veneris mRNA, clone:
YMU001_000060_G01.
         (531 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q1WUH1|Q1WUH1_LACS1 tRNA delta(2)-isopentenylpyrophosphate tr...    38   0.37 
tr|Q4SD73|Q4SD73_TETNG Chromosome 11 SCAF14642, whole genome sho...    35   1.8  
tr|Q53TK5|Q53TK5_HUMAN Putative uncharacterized protein ADAM23 (...    35   1.8  
tr|B4DL48|B4DL48_HUMAN cDNA FLJ53382, highly similar to ADAM 23 ...    35   1.8  
tr|A2RU59|A2RU59_HUMAN ADAM metallopeptidase domain 23 OS=Homo s...    35   1.8  
tr|A9V840|A9V840_MONBE Predicted protein OS=Monosiga brevicollis...    28   5.3  
tr|A9V6E3|A9V6E3_MONBE Predicted protein OS=Monosiga brevicollis...    33   6.9  
tr|B4PJA3|B4PJA3_DROYA GE20521 OS=Drosophila yakuba GN=GE20521 P...    25   8.7  

>tr|Q1WUH1|Q1WUH1_LACS1 tRNA delta(2)-isopentenylpyrophosphate
           transferase OS=Lactobacillus salivarius subsp.
           salivarius (strain UCC118) GN=miaA PE=3 SV=1
          Length = 307

 Score = 37.7 bits (86), Expect = 0.37
 Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
 Frame = +2

Query: 125 QSKMKVSPSQMMHNCMQIWKNIKNDNNKRHMID-TFSYKEGYSRKKGVGACEWERLKLEA 301
           Q + + S +  + NC +  K I ND+N   ++  T  Y +       +G   +++L +E 
Sbjct: 67  QVQQRFSVADFIDNCRKDIKEIANDDNIPIIVGGTGFYLQALLDGYSLGGDTFDQLSIER 126

Query: 302 RGQWQPFLSKLCREKGWK 355
           R +WQ F+ K  +EK W+
Sbjct: 127 RKKWQLFMEKNGKEKLWE 144


>tr|Q4SD73|Q4SD73_TETNG Chromosome 11 SCAF14642, whole genome
           shotgun sequence OS=Tetraodon nigroviridis
           GN=GSTENG00020165001 PE=4 SV=1
          Length = 481

 Score = 35.4 bits (80), Expect = 1.8
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 12/86 (13%)
 Frame = -3

Query: 523 IYTHPHRHTHTHAIEQL------STKVLTIAIIINSNYRDRPAF------MVPSLLTLCA 380
           ++TH H HTHTH +  L      ST+V+ +A ++    +  P        ++P+   +  
Sbjct: 60  LHTHTHTHTHTHTLGMLHHIQTRSTRVVIVAAVVVPTGKAPPNLSQGVPPLLPNQYIMGP 119

Query: 379 HASFFCTPLPSFLPAKL*QERLPLPS 302
                  P+  +    + Q RLP+PS
Sbjct: 120 GGLLPAYPIYGYEDLHMLQSRLPMPS 145


>tr|Q53TK5|Q53TK5_HUMAN Putative uncharacterized protein ADAM23
           (Fragment) OS=Homo sapiens GN=ADAM23 PE=2 SV=1
          Length = 579

 Score = 35.4 bits (80), Expect = 1.8
 Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 13/114 (11%)
 Frame = +2

Query: 98  AFKIFQQQEQSKMKVSPSQMMHNCMQIWKNIKNDNNKRHMID--TFSYKEG--------Y 247
           A + + +++Q  +  +P QM+H   +  + IK   +  H+I   TF YK           
Sbjct: 349 AVETWTEKDQIDITTNPVQMLHEFSKYRQRIKQHADAVHLISRVTFHYKRSSLSYFGGVC 408

Query: 248 SRKKGVGACEWERLKLEARGQWQPFLSKLCREKGWKW---SAEKGCMCTESKEG 400
           SR +GVG  E+      A    Q     L +  G +W   S +  C CTES  G
Sbjct: 409 SRTRGVGVNEYGLPMAVA----QVLSQSLAQNLGIQWEPSSRKPKCDCTESWGG 458


>tr|B4DL48|B4DL48_HUMAN cDNA FLJ53382, highly similar to ADAM 23 (A
           disintegrin and metalloproteinase domain 23) OS=Homo
           sapiens PE=2 SV=1
          Length = 699

 Score = 35.4 bits (80), Expect = 1.8
 Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 13/114 (11%)
 Frame = +2

Query: 98  AFKIFQQQEQSKMKVSPSQMMHNCMQIWKNIKNDNNKRHMID--TFSYKEG--------Y 247
           A + + +++Q  +  +P QM+H   +  + IK   +  H+I   TF YK           
Sbjct: 243 AVETWTEKDQIDITTNPVQMLHEFSKYRQRIKQHADAVHLISRVTFHYKRSSLSYFGGVC 302

Query: 248 SRKKGVGACEWERLKLEARGQWQPFLSKLCREKGWKW---SAEKGCMCTESKEG 400
           SR +GVG  E+      A    Q     L +  G +W   S +  C CTES  G
Sbjct: 303 SRTRGVGVNEYGLPMAVA----QVLSQSLAQNLGIQWEPSSRKPKCDCTESWGG 352


>tr|A2RU59|A2RU59_HUMAN ADAM metallopeptidase domain 23 OS=Homo
           sapiens GN=ADAM23 PE=2 SV=1
          Length = 832

 Score = 35.4 bits (80), Expect = 1.8
 Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 13/114 (11%)
 Frame = +2

Query: 98  AFKIFQQQEQSKMKVSPSQMMHNCMQIWKNIKNDNNKRHMID--TFSYKEG--------Y 247
           A + + +++Q  +  +P QM+H   +  + IK   +  H+I   TF YK           
Sbjct: 349 AVETWTEKDQIDITTNPVQMLHEFSKYRQRIKQHADAVHLISRVTFHYKRSSLSYFGGVC 408

Query: 248 SRKKGVGACEWERLKLEARGQWQPFLSKLCREKGWKW---SAEKGCMCTESKEG 400
           SR +GVG  E+      A    Q     L +  G +W   S +  C CTES  G
Sbjct: 409 SRTRGVGVNEYGLPMAVA----QVLSQSLAQNLGIQWEPSSRKPKCDCTESWGG 458


>tr|A9V840|A9V840_MONBE Predicted protein OS=Monosiga brevicollis
           GN=33876 PE=3 SV=1
          Length = 965

 Score = 28.5 bits (62), Expect(2) = 5.3
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = -3

Query: 514 HPHRHTHTHAIEQLS 470
           HPH HTHTH    LS
Sbjct: 101 HPHTHTHTHLFTSLS 115



 Score = 23.9 bits (50), Expect(2) = 5.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -3

Query: 526 PIYTHPHRHTHTH 488
           P+   PH HTHTH
Sbjct: 95  PLPPPPHPHTHTH 107


>tr|A9V6E3|A9V6E3_MONBE Predicted protein OS=Monosiga brevicollis
           GN=27814 PE=4 SV=1
          Length = 956

 Score = 33.5 bits (75), Expect = 6.9
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 10/95 (10%)
 Frame = -3

Query: 514 HPHRHTHTHAIEQ---LSTKV-LTIAIIINSNYRDRPAFMVPSLLTLCAHASFFCTPLPS 347
           H H HTHTH  ++   LS  + L++ + +  +++ R  F +   L L   A    TPL  
Sbjct: 15  HTHTHTHTHTKKKFFPLSLSLSLSLCVAVPESFQRRWLFKLMKDLPLLVPADAM-TPLSG 73

Query: 346 FLP------AKL*QERLPLPSCFKLEPFPLTSSYT 260
           FLP      A    +R P  + F + PF   S+ T
Sbjct: 74  FLPPPHPNNAMPSLDRSPQTAPFAVAPFGYASTAT 108


>tr|B4PJA3|B4PJA3_DROYA GE20521 OS=Drosophila yakuba GN=GE20521 PE=4
           SV=1
          Length = 441

 Score = 25.0 bits (53), Expect(3) = 8.7
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -3

Query: 520 YTHPHRHTHTH 488
           +THPH H+H H
Sbjct: 92  HTHPHSHSHPH 102



 Score = 23.5 bits (49), Expect(3) = 8.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 514 HPHRHTHTHAIEQ 476
           HPH H+H+H+  Q
Sbjct: 130 HPHPHSHSHSHPQ 142



 Score = 21.6 bits (44), Expect(3) = 8.7
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -1

Query: 381 HMHPFSALHFHPFSLQS 331
           H HP +  H HP  L+S
Sbjct: 138 HSHPQAGSHPHPHHLRS 154