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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914592
Clone id YMU001_000060_G03
Library
Length 483
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000060_G03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GGAAGAATTCGCGGAAATCAAAACGAGACAAAATGAAAGCAAAAAGGTTGAAGTAGAAAA
CCACCCTAGAAATCGAGTTGCAACAAGCCAAAGAACAACTAAAACAAGCAAAGCAAAACA
AAATATAAATAGAGAAAGAAAAATCATCAAAAATGTCATTGGGAGGTTCAATCTTGGTAG
AAAGAATGAACGAGCAATCTTGGTAGAAAAGATGAATAAGCAACTAGACACGATATTGCA
ATCCTATGCAGCTAGACTCAATAATAACGCAAACTTTAGGACTAACCTATCCGCATCCAT
AAGACAACCAAAAGATTGGAAGTGTACAAAAGACTTTTTGAGACTACTCAAGCCCTATTA
TAGCCTGAAGCTCCAAAAACTTCTAAGTCTGTAACGGTGAACGAGCAACTAGACACGATA
TTGCAATCCTATGCGGCTAGACTCGATAACAACCAAACTTTAGAACAAACACTACTGACC
TAT
■■Homology search results ■■ -
sp_hit_id Q4A0V8
Definition sp|Q4A0V8|UAFA_STAS1 Uro-adherence factor A OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
Align length 96
Score (bit) 35.4
E-value 0.12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914592|Adiantum capillus-veneris mRNA, clone:
YMU001_000060_G03.
         (469 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q4A0V8|UAFA_STAS1 Uro-adherence factor A OS=Staphylococcus sa...    35   0.12 
sp|Q03761|TAF12_YEAST Transcription initiation factor TFIID subu...    32   1.1  
sp|P41508|P115_MYCHR Protein P115 OS=Mycoplasma hyorhinis PE=1 SV=2    32   1.8  
sp|P25389|KCC4_YEAST Probable serine/threonine-protein kinase KC...    32   1.8  
sp|Q9BE52|CK5P2_MACFA CDK5 regulatory subunit-associated protein...    30   5.2  
sp|Q54CD8|DDX54_DICDI ATP-dependent RNA helicase ddx54 OS=Dictyo...    30   6.8  
sp|Q52439|BPHA2_PSES1 Biphenyl dioxygenase subunit beta OS=Pseud...    30   6.8  
sp|Q35905|RMAR_SACDO Ribosomal protein VAR1, mitochondrial OS=Sa...    29   8.9  
sp|Q6GQ76|FTSJ2_XENLA FtsJ methyltransferase domain-containing p...    29   8.9  

>sp|Q4A0V8|UAFA_STAS1 Uro-adherence factor A OS=Staphylococcus
           saprophyticus subsp. saprophyticus (strain ATCC 15305 /
           DSM 20229) GN=uafA PE=4 SV=1
          Length = 2316

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
 Frame = +3

Query: 15  QNESKKVEVENHPRNRVATSQRTTKTSKAKQNINRERKIIKNVIGRFNLGRKNERAILVE 194
           + ESK+V  E        T + TT+ SKA +  N+E    KN  G  +L  K +     E
Sbjct: 138 KEESKEVSTEEESIEDRKTEESTTEESKAVEEANKENTTEKNDEGSLDL-EKEKDTYKDE 196

Query: 195 KMNKQLDTILQSYAARLNNNA-------NFRTNLSA 281
           K N +    L+S+  R+ N         N  TNL +
Sbjct: 197 KDNGKKKNELESHNHRIENKVEDNVYKNNKETNLES 232


>sp|Q03761|TAF12_YEAST Transcription initiation factor TFIID subunit
           12 OS=Saccharomyces cerevisiae GN=TAF12 PE=1 SV=1
          Length = 539

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
 Frame = +3

Query: 3   IKTRQNESKKVEVENHPRNRVATSQRTTKTSKAK-QNINRERKIIKNV 143
           +K++Q +   +   N+PR  V TSQ  T+ SKAK  N+N    ++ N+
Sbjct: 302 LKSQQQQQNTITATNNPRGNVNTSQ--TEQSKAKVTNVNATASMLNNI 347


>sp|P41508|P115_MYCHR Protein P115 OS=Mycoplasma hyorhinis PE=1 SV=2
          Length = 979

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 23/96 (23%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
 Frame = +3

Query: 15  QNESKKVEVENHPRNRVATSQRT-TKTSKAKQNINRERKIIKNVIGRFN--LGRKNERAI 185
           Q   K++E + +  ++ A+  +   + SKA +++  E  +I N +  FN  L   N   +
Sbjct: 193 QGAIKELERQVNSLDKQASKAKIYLEKSKALESV--EVGLIVNDLNFFNEKLNNLNTSLL 250

Query: 186 LVEKMNKQLDTILQSYAARLNNNANFRTNLSASIRQ 293
            VE+    L+  +Q+Y + ++   +F+T + +SI++
Sbjct: 251 EVEQQRNDLELNIQTYESSISQTVHFKTEVESSIQE 286


>sp|P25389|KCC4_YEAST Probable serine/threonine-protein kinase KCC4
           OS=Saccharomyces cerevisiae GN=KCC4 PE=1 SV=3
          Length = 1037

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
 Frame = +3

Query: 93  SKAKQNINRERKIIKNVIGRFNL------GRKNERAILVEKMNKQLDTILQSYAARLNNN 254
           SK K+N   + KI+  ++ RF L       +KN   I   K NK+  T+  S +  LNN 
Sbjct: 343 SKLKENGTNKEKILYALLYRFKLDSVRGSNKKNRNKIKKTKKNKRSSTLSSSSSLLLNNR 402

Query: 255 A 257
           +
Sbjct: 403 S 403


>sp|Q9BE52|CK5P2_MACFA CDK5 regulatory subunit-associated protein 2
           OS=Macaca fascicularis GN=CDK5RAP2 PE=2 SV=1
          Length = 862

 Score = 30.0 bits (66), Expect = 5.2
 Identities = 18/78 (23%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   IKTRQNESKKVEVENHPRNRVATSQRTTKTSKAKQNINRERKIIKNVIGRFNLGRKNERA 182
           I+  +NE +K+  E + R +   ++     S++ + ++ + ++IK++       R N + 
Sbjct: 436 IRDLRNEVEKLRNEVNERKKAMENRYKNLLSESSKKLHNQEQVIKHL-----TERTNHKD 490

Query: 183 ILVEKMN-KQLDTILQSY 233
           +L++K N K L+ I Q++
Sbjct: 491 MLLQKFNEKDLEVIQQNH 508


>sp|Q54CD8|DDX54_DICDI ATP-dependent RNA helicase ddx54
           OS=Dictyostelium discoideum GN=helA PE=3 SV=1
          Length = 1091

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 20/108 (18%), Positives = 46/108 (42%), Gaps = 2/108 (1%)
 Frame = +3

Query: 3   IKTRQNESKKVEVENHPRNRVATSQRTTKTSKAKQNINRERK--IIKNVIGRFNLGRKNE 176
           ++T+  +   +   ++  N  A ++R  K  + K+ + + +   +IK+ +   +   K +
Sbjct: 31  LETKSYQKALLSKNSNNNNDGAQAKRLKKKEEFKKKLEKRQNTIVIKDKLKEPSTFLKED 90

Query: 177 RAILVEKMNKQLDTILQSYAARLNNNANFRTNLSASIRQPKDWKCTKD 320
           ++   + +    D        R+N N NF TNL   +    D    +D
Sbjct: 91  QSFFDQNIFNDQDDYKHQQMNRININENFETNLFGDMMNEFDGDLNED 138


>sp|Q52439|BPHA2_PSES1 Biphenyl dioxygenase subunit beta
           OS=Pseudomonas sp. (strain KKS102) GN=bphA2 PE=3 SV=1
          Length = 193

 Score = 29.6 bits (65), Expect = 6.8
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 42  ENHPRNRVATSQRTTKTSKAKQNINRERKIIKNVIGR 152
           ENH   R    QRT++ + A+  ++R R I+ NVI R
Sbjct: 89  ENHETMRGRIRQRTSELNWAEDPLSRTRHIVSNVIVR 125


>sp|Q35905|RMAR_SACDO Ribosomal protein VAR1, mitochondrial
           OS=Saccharomyces douglasii GN=VAR1 PE=3 SV=1
          Length = 373

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = +3

Query: 108 NINRERKIIKNVIGRFNLGRKNERAILVEKMNKQLDTILQSYAARLNNNANFRTNL 275
           NIN ++ ++KN++   N  R N    +++  N  ++  LQ     LNN  N+ T +
Sbjct: 23  NINNKKLLLKNMLLDMNNKRMNNMKTMLKNNNMNINNKLQ----HLNNMNNWNTQI 74


>sp|Q6GQ76|FTSJ2_XENLA FtsJ methyltransferase domain-containing
           protein 2 OS=Xenopus laevis GN=ftsjd2 PE=2 SV=1
          Length = 846

 Score = 29.3 bits (64), Expect = 8.9
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
 Frame = +3

Query: 144 IGRFNLGRKNERAILVEKMNKQLDTILQSYAARLNNNANFRTNLSASIRQPKDW--KCTK 317
           +G+F  GRK       +K  + L  +L+ +   L  N N+R+   A+  +  DW  +CT 
Sbjct: 106 LGKFGQGRKEIVETSKQKGRRGLGMVLKGFEKEL--NINWRSEPEATAYEEVDWFPECTT 163

Query: 318 D 320
           D
Sbjct: 164 D 164
tr_hit_id A8SN70
Definition tr|A8SN70|A8SN70_9FIRM Putative uncharacterized protein OS=Parvimonas micra ATCC 33270
Align length 78
Score (bit) 37.4
E-value 0.38
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914592|Adiantum capillus-veneris mRNA, clone:
YMU001_000060_G03.
         (469 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8SN70|A8SN70_9FIRM Putative uncharacterized protein OS=Parvi...    37   0.38 
tr|B3CSD1|B3CSD1_ORITI Putative conjugative transfer protein Tra...    37   0.65 
tr|B3CRD1|B3CRD1_ORITI Putative conjugative transfer protein Tra...    37   0.65 
tr|B3CQV0|B3CQV0_ORITI Putative conjugative transfer protein Tra...    37   0.65 
tr|O29909|O29909_ARCFU Type II secretion system protein (GspE-1)...    37   0.65 
tr|Q8IK06|Q8IK06_PLAF7 Putative uncharacterized protein OS=Plasm...    36   0.85 
tr|A0DQG9|A0DQG9_PARTE Chromosome undetermined scaffold_6, whole...    35   1.4  
tr|B3CUQ3|B3CUQ3_ORITI Putative conjugative transfer protein Tra...    35   1.9  
tr|B3CU93|B3CU93_ORITI Putative conjugative transfer protein Tra...    35   1.9  
tr|B3CU53|B3CU53_ORITI Putative conjugative transfer protein Tra...    35   1.9  
tr|Q22167|Q22167_CAEEL Protein T04F8.6, partially confirmed by t...    35   2.5  
tr|A4GK16|A4GK16_9BACT GTP-binding protein Era OS=uncultured mar...    34   3.2  
tr|B3CTU2|B3CTU2_ORITI Putative conjugative transfer protein Tra...    34   4.2  
tr|B3CSV8|B3CSV8_ORITI Putative conjugative transfer protein Tra...    34   4.2  
tr|B3CQJ6|B3CQJ6_ORITI Putative conjugative transfer protein Tra...    34   4.2  
tr|B3CQ99|B3CQ99_ORITI Putative conjugative transfer protein Tra...    34   4.2  
tr|B8CDV4|B8CDV4_THAPS Predicted protein OS=Thalassiosira pseudo...    34   4.2  
tr|Q4Z2N6|Q4Z2N6_PLABE Putative uncharacterized protein (Fragmen...    34   4.2  
tr|A0DFE1|A0DFE1_PARTE Chromosome undetermined scaffold_49, whol...    34   4.2  
tr|Q8IE29|Q8IE29_PLAF7 Putative uncharacterized protein MAL13P1....    33   5.5  
tr|Q8I5I2|Q8I5I2_PLAF7 Putative uncharacterized protein OS=Plasm...    33   5.5  
tr|Q4Z3L0|Q4Z3L0_PLABE Putative uncharacterized protein OS=Plasm...    33   5.5  
tr|Q24E38|Q24E38_TETTH Leucine Rich Repeat family protein OS=Tet...    33   5.5  
tr|Q22RL0|Q22RL0_TETTH Putative uncharacterized protein OS=Tetra...    33   5.5  
tr|Q1CW29|Q1CW29_MYXXD CRISPR-associated protein Crm2 OS=Myxococ...    33   7.1  
tr|Q8ILB8|Q8ILB8_PLAF7 Methionine aminopeptidase OS=Plasmodium f...    33   7.2  
tr|Q8IDW4|Q8IDW4_PLAF7 Nuclear movement protein, putative OS=Pla...    33   7.2  
tr|Q7RQQ4|Q7RQQ4_PLAYO Myosin PfM-C-related OS=Plasmodium yoelii...    33   7.2  
tr|Q22W96|Q22W96_TETTH Putative uncharacterized protein OS=Tetra...    33   7.2  
tr|B4U651|B4U651_HYDS0 Methyl-accepting chemotaxis sensory trans...    33   9.4  

>tr|A8SN70|A8SN70_9FIRM Putative uncharacterized protein
           OS=Parvimonas micra ATCC 33270 GN=PEPMIC_01570 PE=4 SV=1
          Length = 242

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 20/78 (25%), Positives = 38/78 (48%)
 Frame = +3

Query: 18  NESKKVEVENHPRNRVATSQRTTKTSKAKQNINRERKIIKNVIGRFNLGRKNERAILVEK 197
           NE +   + N+P  +++  Q+      + ++     ++I NVI  +NL +K E     EK
Sbjct: 104 NELENYFLVNYPNLKISRKQKLIVRKLSSKDYRFRNRLINNVIDYYNLNKKFE-----EK 158

Query: 198 MNKQLDTILQSYAARLNN 251
            N   + +++ Y   LNN
Sbjct: 159 TNDFFENVIKEYIFNLNN 176


>tr|B3CSD1|B3CSD1_ORITI Putative conjugative transfer protein TraI
           OS=Orientia tsutsugamushi (strain Ikeda) GN=OTT_0874
           PE=4 SV=1
          Length = 372

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
 Frame = +3

Query: 60  RVATSQRTTKTSKAKQNINRERKIIKNVIGRFNLGR-----KNERAILVEKM--NKQLDT 218
           ++  +  TTK ++ + N   ++  I NV   +N        K E    VE +  NK L+ 
Sbjct: 112 KLTKAVETTKLTQTENNSIEKQNNITNVKELYNKSSSLYYFKQEEEAKVETIVVNKYLEN 171

Query: 219 ILQSYAARLNNNANFRTNLSASIRQPKDWKCTKDFLR 329
             + Y+A++ NN+N R N+       K W     F++
Sbjct: 172 HTEIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVK 208


>tr|B3CRD1|B3CRD1_ORITI Putative conjugative transfer protein TraI
           OS=Orientia tsutsugamushi (strain Ikeda) GN=OTT_0657
           PE=4 SV=1
          Length = 372

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
 Frame = +3

Query: 60  RVATSQRTTKTSKAKQNINRERKIIKNVIGRFNLGR-----KNERAILVEKM--NKQLDT 218
           ++  +  TTK ++ + N   ++  I NV   +N        K E    VE +  NK L+ 
Sbjct: 112 KLTKAVETTKLTQTENNSIEKQNNITNVKELYNKSSSLYYFKQEEEAKVETIVVNKYLEN 171

Query: 219 ILQSYAARLNNNANFRTNLSASIRQPKDWKCTKDFLR 329
             + Y+A++ NN+N R N+       K W     F++
Sbjct: 172 HTEIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVK 208


>tr|B3CQV0|B3CQV0_ORITI Putative conjugative transfer protein TraI
           OS=Orientia tsutsugamushi (strain Ikeda) GN=OTT_0399
           PE=4 SV=1
          Length = 372

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
 Frame = +3

Query: 60  RVATSQRTTKTSKAKQNINRERKIIKNVIGRFNLGR-----KNERAILVEKM--NKQLDT 218
           ++  +  TTK ++ + N   ++  I NV   +N        K E    VE +  NK L+ 
Sbjct: 112 KLTKAVETTKLTQTENNSIEKQNNITNVKELYNKSSSLYYFKQEEEAKVETIVVNKYLEN 171

Query: 219 ILQSYAARLNNNANFRTNLSASIRQPKDWKCTKDFLR 329
             + Y+A++ NN+N R N+       K W     F++
Sbjct: 172 HTEIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVK 208


>tr|O29909|O29909_ARCFU Type II secretion system protein (GspE-1)
           OS=Archaeoglobus fulgidus GN=AF_0338 PE=4 SV=1
          Length = 595

 Score = 36.6 bits (83), Expect = 0.65
 Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
 Frame = +3

Query: 120 ERKIIKNVIGRFNLGRKNERAI--LVEKMNKQLDTILQSYAARLNNNANFR 266
           E KI+KNVIGR      N + I   V  + K++D+IL++Y   L  +  FR
Sbjct: 150 EEKIVKNVIGRLEYYAANPKEIGDKVGTLKKKIDSILEAYRVNLEGSDYFR 200


>tr|Q8IK06|Q8IK06_PLAF7 Putative uncharacterized protein
           OS=Plasmodium falciparum (isolate 3D7) GN=PF10_0034 PE=4
           SV=1
          Length = 1303

 Score = 36.2 bits (82), Expect = 0.85
 Identities = 25/83 (30%), Positives = 37/83 (44%), Gaps = 9/83 (10%)
 Frame = +3

Query: 57  NRVATSQRTTKTSKAKQNINRERKIIKNVIGRFNLG---------RKNERAILVEKMNKQ 209
           N    S ++ K  K  QNI +E+  +KN+    NL          +KN + IL  K  ++
Sbjct: 479 NSSKISSKSGKNDKDSQNIEKEQTKLKNIKSSNNLFNNEQQNGVIKKNYKTILERKDKEE 538

Query: 210 LDTILQSYAARLNNNANFRTNLS 278
              I+  Y    NNN N   NL+
Sbjct: 539 DSHIIDYYQNNNNNNNNSNINLT 561


>tr|A0DQG9|A0DQG9_PARTE Chromosome undetermined scaffold_6, whole
           genome shotgun sequence OS=Paramecium tetraurelia
           GN=GSPATT00002686001 PE=4 SV=1
          Length = 1094

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 2/104 (1%)
 Frame = +3

Query: 15  QNESKKVEVENHPRNRVATSQ--RTTKTSKAKQNINRERKIIKNVIGRFNLGRKNERAIL 188
           Q E++ VE   HP       Q  +  +  + KQN+N+E  +I++    FN   +    + 
Sbjct: 196 QYETQYVETNTHPTKTTQKKQSKKQNQGKQKKQNLNQEPNLIQSNPACFNQQGQGSSGLE 255

Query: 189 VEKMNKQLDTILQSYAARLNNNANFRTNLSASIRQPKDWKCTKD 320
           ++K   Q++ ++ +  ++ + ++    NL+    Q K+ K  +D
Sbjct: 256 IQKQQNQINDLICNIISKKSIDSE---NLTEEYPQQKEQKKKQD 296


>tr|B3CUQ3|B3CUQ3_ORITI Putative conjugative transfer protein TraI
           OS=Orientia tsutsugamushi (strain Ikeda) GN=OTT_1642
           PE=4 SV=1
          Length = 372

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
 Frame = +3

Query: 78  RTTKTSKAKQN-INRERKIIKNVIGRFNLGRKNERAILVEKMNKQLDTILQSYAARLNNN 254
           +T   S AKQN I   +++       + L ++ E  +    +NK L+     Y+A++ NN
Sbjct: 124 QTENNSIAKQNDITNVKELYNKSSSLYYLKQEEEAKVEAIVVNKFLENHTGIYSAKIFNN 183

Query: 255 ANFRTNLSASIRQPKDWKCTKDFLR 329
           +N R N+       K W     F++
Sbjct: 184 SNLRANMVFDEETQKSWPALTIFVK 208


>tr|B3CU93|B3CU93_ORITI Putative conjugative transfer protein TraI
           OS=Orientia tsutsugamushi (strain Ikeda) GN=OTT_1482
           PE=4 SV=1
          Length = 356

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
 Frame = +3

Query: 60  RVATSQRTTKTSKAKQNINRERKIIKNVIGRFNLGR-----KNERAILVEKM--NKQLDT 218
           ++  +  TTK ++ + N   ++  I NV   +N        K E    VE +  NK L+ 
Sbjct: 96  KLTKAVETTKLTQTENNSIEKQNDITNVKELYNKSSSLYYFKQEEEAKVETIVVNKYLEN 155

Query: 219 ILQSYAARLNNNANFRTNLSASIRQPKDWKCTKDFLR 329
               Y+A++ NN+N R N+       K W     F++
Sbjct: 156 HTGIYSAKIFNNSNLRANMVFDEETQKSWPALTIFVK 192


>tr|B3CU53|B3CU53_ORITI Putative conjugative transfer protein TraI
           OS=Orientia tsutsugamushi (strain Ikeda) GN=OTT_1442
           PE=4 SV=1
          Length = 520

 Score = 35.0 bits (79), Expect = 1.9
 Identities = 22/85 (25%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
 Frame = +3

Query: 78  RTTKTSKAKQN-INRERKIIKNVIGRFNLGRKNERAILVEKMNKQLDTILQSYAARLNNN 254
           +T   S AKQN I   +++       + L ++ E  +    +NK L+     Y+A++ NN
Sbjct: 272 QTENNSIAKQNDITNVKELYNKSSSLYYLKQEEEAKVEAIVVNKFLENHTGIYSAKIFNN 331

Query: 255 ANFRTNLSASIRQPKDWKCTKDFLR 329
           +N R N+       K W     F++
Sbjct: 332 SNLRANMVFDEETQKSWPALTIFVK 356