BP914594
Clone id YMU001_000060_G06
Library
Length 542
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000060_G06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ATTCATTATCAGGGCAACTTCAAATGAGAAATACCAAGGGGAGCTCTCTGTCGCATCCAA
TGGCCATGGTGCTACTGGCATCACACCGATACAATTCATTATCAGGGCGGCTTCAATGAG
AGCACCAAGGAGAGCTCTTTGTCGTATCCAATGGCCATGACGCGTGTCGTGGCACCAACA
ATTGAACAAAGTCATGTCAAGGGACAATGATTTTGCTACAGATTAGCAGTCCAATGCTTT
AAGGATTTGCTGAACGTCCATGAAAAAAACAGCATCATGGCTCTGGCTTCGACACCTTCC
ACAGCAAACATATACTAANAGCCATGGACTTCTGAGAGGTGTATAATCACTCTAATACAC
CTTGAAAAGAGTTCTAAACAAAAGTGAACAAGACATGCTCTTGTTTCCAGATGCTTCCAA
CGGTGCTTCCATCATTTCCAAAAAGCCAACCAAGATAATTGCCGACCACAACAAAGAAAG
AAACACACATGTACCTCCCCACAGGAAAGAAAAGTAATAAGCCTCAAACTAAACAGCTGA
AT
■■Homology search results ■■ -
sp_hit_id Q04G78
Definition sp|Q04G78|RL16_OENOB 50S ribosomal protein L16 OS=Oenococcus oeni (strain BAA-331 / PSU-1)
Align length 42
Score (bit) 30.4
E-value 5.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914594|Adiantum capillus-veneris mRNA, clone:
YMU001_000060_G06.
(542 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q04G78|RL16_OENOB 50S ribosomal protein L16 OS=Oenococcus oen... 30 5.8
sp|A7MIA0|KEFC_ENTS8 Glutathione-regulated potassium-efflux syst... 30 5.8
sp|P57805|RNC_PASMU Ribonuclease 3 OS=Pasteurella multocida GN=r... 30 9.9

>sp|Q04G78|RL16_OENOB 50S ribosomal protein L16 OS=Oenococcus oeni
(strain BAA-331 / PSU-1) GN=rplP PE=3 SV=1
Length = 143

Score = 30.4 bits (67), Expect = 5.8
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +2

Query: 191 VMSRDNDFATD*QSNALRIC*TSMKKTASWLWLRHLPQQTYT 316
+ S +N++ T+ Q A RI T K +W++ PQ++YT
Sbjct: 34 LQSLENNWITNRQIEAARIAITRYMKRGGKVWIKIFPQKSYT 75


>sp|A7MIA0|KEFC_ENTS8 Glutathione-regulated potassium-efflux system
protein kefC OS=Enterobacter sakazakii (strain ATCC
BAA-894) GN=kefC PE=3 SV=1
Length = 620

Score = 30.4 bits (67), Expect = 5.8
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = -3

Query: 504 LWGGTCVFLSLLWSAIILVGF---LEMMEAPLEASGNKSMSCSLLFRTLFKV 358
L GG CV L L W +L+G L ++A ++++ S + R+ F V
Sbjct: 100 LLGGFCVALGLRWQVALLIGLTLALSSTAIAMQAMNERNLTASQMGRSAFAV 151


>sp|P57805|RNC_PASMU Ribonuclease 3 OS=Pasteurella multocida GN=rnc
PE=3 SV=1
Length = 225

Score = 29.6 bits (65), Expect = 9.9
Identities = 13/56 (23%), Positives = 24/56 (42%)
Frame = +1

Query: 73 YWHHTDTIHYQGGFNESTKESSLSYPMAMTRVVAPTIEQSHVKGQ*FCYRLAVQCF 240
+W+ Q G N+ ++ L + R+ PT +KG+ C V+C+
Sbjct: 137 HWYQAQLKQIQPGDNQKDPKTRLQEYLQGKRLPLPTYNVVEIKGEAHCQTFTVECY 192


tr_hit_id B4NIZ5
Definition tr|B4NIZ5|B4NIZ5_DROWI GK14368 OS=Drosophila willistoni
Align length 61
Score (bit) 33.5
E-value 7.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914594|Adiantum capillus-veneris mRNA, clone:
YMU001_000060_G06.
(542 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B4NIZ5|B4NIZ5_DROWI GK14368 OS=Drosophila willistoni GN=GK143... 33 7.4

>tr|B4NIZ5|B4NIZ5_DROWI GK14368 OS=Drosophila willistoni GN=GK14368
PE=4 SV=1
Length = 406

Score = 33.5 bits (75), Expect = 7.4
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -1

Query: 500 GEVHVCFFL-CCGRQLSWLAFWK*WKHRWKHLETRACLVHFCLELFSRCIRVIIHLSEVH 324
G + C+ CCG+QL F +H+ H E R C+ C F R+ +H S+ H
Sbjct: 215 GNQNRCYICDCCGKQLK--TFTALNEHKLVHTEDRPCVCPICNAAFKNKARLRVH-SQTH 271

Query: 323 G 321
G
Sbjct: 272 G 272