BP914598
Clone id YMU001_000060_G10
Library
Length 304
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000060_G10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTTTTTACAAAAATGACCCATTTGCAATGCAAATTTGTTCAATGAAAGCATTAAATC
CTATACACAGTATTCTAAAATTTACAGCTTTTACTGTAGTCTATGAGTACAAGCACTGTA
TGGTCTACAATGACTCATGAGTACCTTTCTTGATAAGTTCAAGGGAAAAAGACCCATGCC
TCGTACCGAAACGACATAAATCCATGCCTCATAGATCCAAGCTCTGATGACCCAACGCAT
GCATGCGGTAGTTCTTTCTATGCCACCTAAACTCAAAAACAGCAGTGCCAAATACATAAC
TCAA
■■Homology search results ■■ -
sp_hit_id O84000
Definition sp|O84000|Y1037_TREPA UPF0073 membrane protein TP_1037 OS=Treponema pallidum
Align length 50
Score (bit) 29.3
E-value 6.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914598|Adiantum capillus-veneris mRNA, clone:
YMU001_000060_G10.
(304 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O84000|Y1037_TREPA UPF0073 membrane protein TP_1037 OS=Trepon... 29 6.4

>sp|O84000|Y1037_TREPA UPF0073 membrane protein TP_1037 OS=Treponema
pallidum GN=TP_1037 PE=3 SV=1
Length = 238

Score = 29.3 bits (64), Expect = 6.4
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Frame = -2

Query: 291 LALLFLSLGGIERTTACMRWVIR--AWIYEAW-IYVVSVRGMGLFPLNLS 151
++ LFL LGG+ T C+ + ++ W + W ++V+ M F L LS
Sbjct: 188 ISFLFLVLGGVLYTVGCVFYALKRIKWTHTIWHMFVIGGSVMHFFSLYLS 237


tr_hit_id Q3LVU6
Definition tr|Q3LVU6|Q3LVU6_BIGNA Conserved ATPase OS=Bigelowiella natans
Align length 69
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914598|Adiantum capillus-veneris mRNA, clone:
YMU001_000060_G10.
(304 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q3LVU6|Q3LVU6_BIGNA Conserved ATPase OS=Bigelowiella natans P... 33 5.4

>tr|Q3LVU6|Q3LVU6_BIGNA Conserved ATPase OS=Bigelowiella natans PE=4
SV=1
Length = 822

Score = 33.5 bits (75), Expect = 5.4
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = +3

Query: 6 FYKNDPFAMQICSMKALNPIHSILKFTAFTVVYEY-----KHCMVYNDS*VPFLISSREK 170
FY N+ F+ I + A+ I S ++ V Y Y +Y + + + +E
Sbjct: 402 FYSNEVFSQLIGFLVAIKKISSYYSNNSYKVCYFYGLEKWAEIFLYTKPNLQYYLKIKEY 461

Query: 171 DPCLVPKRH 197
+PC+ PK H
Sbjct: 462 NPCITPKLH 470