BP914599
Clone id YMU001_000060_G11
Library
Length 358
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000060_G11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
CAGGGTATAGGCACGTAGAGCTCAATTTATGATGCCTACCCGTCTTTTTAGATTGCATAT
TAGAGCTACAGATTGCAAGATATGGCCAGTTGAAGTTTTGTCGGGGCTAGGTTGGTGCCC
ACTTGACCACATGGGGAGTCGTGCCGTCTGGCAATTTTTGGATTGTAACAGAGTTCAAGA
AGGTGCTATACAGTGTATGGATCTAGTAGGAGTTGCCTGCACTTCAAACGAAGCCCAAAT
CAGGAAGTTACAAAAGCCGAGAAGCTGGGTGTATTTGTCCGGAGTTAGCTACAAATAAGT
ATTCACATTTTTGCGGCCTCGGTTCAAGGACTCGGGGAGTCTTGAGTTGCGGCTAGAG
■■Homology search results ■■ -
sp_hit_id Q9P6N5
Definition sp|Q9P6N5|DS1PP_SCHPO Dihydrosphingosine 1-phosphate phosphatase C823.11 OS=Schizosaccharomyces pombe
Align length 41
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914599|Adiantum capillus-veneris mRNA, clone:
YMU001_000060_G11.
(358 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9P6N5|DS1PP_SCHPO Dihydrosphingosine 1-phosphate phosphatase... 30 2.9
sp|Q566R2|TM2D2_RAT TM2 domain-containing protein 2 OS=Rattus no... 29 6.5
sp|Q9NFN6|GSH1_ONCVO Glutamate--cysteine ligase OS=Onchocerca vo... 29 6.5
sp|Q2RP31|PANC_RHORT Pantothenate synthetase OS=Rhodospirillum r... 29 8.4
sp|Q6NVD0|FREM2_MOUSE FRAS1-related extracellular matrix protein... 29 8.4
sp|Q6ICH7|ASPH2_HUMAN Aspartate beta-hydroxylase domain-containi... 29 8.4
sp|Q2FSF9|DP2L_METHJ DNA polymerase II large subunit OS=Methanos... 29 8.5

>sp|Q9P6N5|DS1PP_SCHPO Dihydrosphingosine 1-phosphate phosphatase
C823.11 OS=Schizosaccharomyces pombe GN=SPAC823.11 PE=2
SV=1
Length = 411

Score = 30.4 bits (67), Expect = 2.9
Identities = 18/41 (43%), Positives = 21/41 (51%)
Frame = -2

Query: 336 PESLNRGRKNVNTYL*LTPDKYTQLLGFCNFLIWASFEVQA 214
PESL+ N+N+Y L L G C LIW SF QA
Sbjct: 282 PESLSHLHDNLNSYF-LLKFFVRVLFGVCMILIWKSFAKQA 321


>sp|Q566R2|TM2D2_RAT TM2 domain-containing protein 2 OS=Rattus
norvegicus GN=Tm2d2 PE=2 SV=1
Length = 213

Score = 29.3 bits (64), Expect = 6.5
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 10/53 (18%)
Frame = +2

Query: 119 PLDHMGSRAVWQFLDC----------NRVQEGAIQCMDLVGVACTSNEAQIRK 247
P+DH+G+ +Q L + V+ A+QC L G+ C S +RK
Sbjct: 85 PVDHVGNATAYQELGYGCLKFGGQAYSDVEHTAVQCRALEGIECASPRTFLRK 137


>sp|Q9NFN6|GSH1_ONCVO Glutamate--cysteine ligase OS=Onchocerca
volvulus GN=gcs-1 PE=2 SV=2
Length = 652

Score = 29.3 bits (64), Expect = 6.5
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +2

Query: 128 HMGSRAVWQFL-DCNRVQEGAIQCMDLVGVACTSNEAQI 241
++G R ++ L + +R+ +G I C L+G CT +++I
Sbjct: 595 YVGDRIIYDMLKEMDRISKGEISCPKLLGDYCTKTDSRI 633


>sp|Q2RP31|PANC_RHORT Pantothenate synthetase OS=Rhodospirillum
rubrum (strain ATCC 11170 / NCIB 8255) GN=panC PE=3 SV=2
Length = 282

Score = 28.9 bits (63), Expect = 8.4
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Frame = +2

Query: 62 RATDCKIWPVEVLSGLGWCPLDHMGSR--AVWQFLDCNRVQEGAIQCMDLVG 211
R DC W ++ L LG+ P+D++ R A + LD G + C +G
Sbjct: 221 RVDDCLAWGIDELKALGFGPVDYLDLRDGATLERLDDAPEGPGRLLCAAYLG 272


>sp|Q6NVD0|FREM2_MOUSE FRAS1-related extracellular matrix protein 2
OS=Mus musculus GN=Frem2 PE=2 SV=2
Length = 3160

Score = 28.9 bits (63), Expect = 8.4
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1

Query: 169 QSSRRCYTVYGSSRSCLHFKRSPNQEVT 252
+SS RCYT GS++ + F+ PN +V+
Sbjct: 2148 RSSVRCYTRQGSAQVMMDFEERPNTDVS 2175


>sp|Q6ICH7|ASPH2_HUMAN Aspartate beta-hydroxylase domain-containing
protein 2 OS=Homo sapiens GN=ASPHD2 PE=2 SV=1
Length = 369

Score = 28.9 bits (63), Expect = 8.4
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2

Query: 119 PLDHMGSRAVWQFLDCNRVQEGAIQCMDLVGVACTSNEAQIRKL 250
P ++ ++ Q D N +Q G + C V CT NE +KL
Sbjct: 83 PRPYVSVNSLMQAADANGLQNGYVYCQSPECVRCTHNEGLNQKL 126


>sp|Q2FSF9|DP2L_METHJ DNA polymerase II large subunit
OS=Methanospirillum hungatei (strain JF-1 / DSM 864)
GN=polC PE=3 SV=1
Length = 1286

Score = 28.9 bits (63), Expect = 8.5
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +3

Query: 276 CPELATNKYSHFCGLGSRTRGVLSC 350
CP T Y + C G+ T VLSC
Sbjct: 630 CPACGTESYKNRCSCGTHTEPVLSC 654


tr_hit_id A6UZW1
Definition tr|A6UZW1|A6UZW1_PSEA7 Cytochrome c oxidase accessory protein CcoG OS=Pseudomonas aeruginosa (strain PA7)
Align length 93
Score (bit) 35.4
E-value 1.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914599|Adiantum capillus-veneris mRNA, clone:
YMU001_000060_G11.
(358 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A6UZW1|A6UZW1_PSEA7 Cytochrome c oxidase accessory protein Cc... 35 1.4
tr|Q9HWQ0|Q9HWQ0_PSEAE Probable iron-sulfur protein OS=Pseudomon... 35 2.5
tr|Q02SU5|Q02SU5_PSEAB Putative iron-sulfur cluster-binding prot... 35 2.5
tr|B7V6L9|B7V6L9_PSEAE Probable iron-sulfur protein OS=Pseudomon... 35 2.5
tr|A3LFM6|A3LFM6_PSEAE Putative uncharacterized protein OS=Pseud... 35 2.5
tr|A3KZ27|A3KZ27_PSEAE Putative uncharacterized protein OS=Pseud... 35 2.5
tr|A7XUU4|A7XUU4_COCPO Chitobiase 2 OS=Coccidioides posadasii PE... 34 4.2
tr|Q88H22|Q88H22_PSEPK Iron-sulfur cluster-binding protein OS=Ps... 33 9.4
tr|A5W2L0|A5W2L0_PSEP1 Cytochrome c oxidase cbb3 type, accessory... 33 9.4
tr|A4VKK9|A4VKK9_PSEU5 Probable ferredoxin OS=Pseudomonas stutze... 33 9.4

>tr|A6UZW1|A6UZW1_PSEA7 Cytochrome c oxidase accessory protein CcoG
OS=Pseudomonas aeruginosa (strain PA7) GN=ccoG2 PE=4
SV=1
Length = 476

Score = 35.4 bits (80), Expect = 1.4
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Frame = +2

Query: 89 VEVLSGLGWCPLDHMGSRAVWQFLDCNRVQEGAIQCMDLVGVACTSNEAQIRKLQKPRSW 268
+ V +G WC S W F+ C +V EG + S +RK K W
Sbjct: 112 ITVFAGRVWCGYTCPQSVWTWVFMRCEKVTEGDRNARIKLDQGPASAAKLLRKTAKHALW 171

Query: 269 VYLS---GVSYK*VFTFLRPRFKDSGSLELRLE 358
+ +S +++ FT +RP D S +L LE
Sbjct: 172 LGVSLVTAITFIGYFTPVRPLVADLFSFQLDLE 204


>tr|Q9HWQ0|Q9HWQ0_PSEAE Probable iron-sulfur protein OS=Pseudomonas
aeruginosa GN=PA4131 PE=4 SV=1
Length = 573

Score = 34.7 bits (78), Expect = 2.5
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Frame = +2

Query: 89 VEVLSGLGWCPLDHMGSRAVWQFLDCNRVQEGAIQCMDLVGVACTSNEAQIRKLQKPRSW 268
+ V +G WC S W F+ C +V EG + S +RK K W
Sbjct: 209 ITVFAGRVWCGYTCPQSVWTWVFMWCEKVTEGDRNARIKLDQGPASAAKLLRKTAKHALW 268

Query: 269 VYLS---GVSYK*VFTFLRPRFKDSGSLELRLE 358
+ +S +++ FT +RP D S +L LE
Sbjct: 269 LGVSLVTAITFIGYFTPVRPLVADLFSFQLDLE 301


>tr|Q02SU5|Q02SU5_PSEAB Putative iron-sulfur cluster-binding protein
OS=Pseudomonas aeruginosa (strain UCBPP-PA14)
GN=PA14_10540 PE=4 SV=1
Length = 573

Score = 34.7 bits (78), Expect = 2.5
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Frame = +2

Query: 89 VEVLSGLGWCPLDHMGSRAVWQFLDCNRVQEGAIQCMDLVGVACTSNEAQIRKLQKPRSW 268
+ V +G WC S W F+ C +V EG + S +RK K W
Sbjct: 209 ITVFAGRVWCGYTCPQSVWTWVFMWCEKVTEGDRNARIKLDQGPASAAKLLRKTAKHALW 268

Query: 269 VYLS---GVSYK*VFTFLRPRFKDSGSLELRLE 358
+ +S +++ FT +RP D S +L LE
Sbjct: 269 LGVSLVTAITFIGYFTPVRPLVADLFSFQLDLE 301


>tr|B7V6L9|B7V6L9_PSEAE Probable iron-sulfur protein OS=Pseudomonas
aeruginosa LESB58 GN=PLES_08401 PE=4 SV=1
Length = 573

Score = 34.7 bits (78), Expect = 2.5
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Frame = +2

Query: 89 VEVLSGLGWCPLDHMGSRAVWQFLDCNRVQEGAIQCMDLVGVACTSNEAQIRKLQKPRSW 268
+ V +G WC S W F+ C +V EG + S +RK K W
Sbjct: 209 ITVFAGRVWCGYTCPQSVWTWVFMWCEKVTEGDRNARIKLDQGPASAAKLLRKTAKHALW 268

Query: 269 VYLS---GVSYK*VFTFLRPRFKDSGSLELRLE 358
+ +S +++ FT +RP D S +L LE
Sbjct: 269 LGVSLVTAITFIGYFTPVRPLVADLFSFQLDLE 301


>tr|A3LFM6|A3LFM6_PSEAE Putative uncharacterized protein
OS=Pseudomonas aeruginosa 2192 GN=PA2G_03582 PE=4 SV=1
Length = 573

Score = 34.7 bits (78), Expect = 2.5
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Frame = +2

Query: 89 VEVLSGLGWCPLDHMGSRAVWQFLDCNRVQEGAIQCMDLVGVACTSNEAQIRKLQKPRSW 268
+ V +G WC S W F+ C +V EG + S +RK K W
Sbjct: 209 ITVFAGRVWCGYTCPQSVWTWVFMWCEKVTEGDRNARIKLDQGPASAAKLLRKTAKHALW 268

Query: 269 VYLS---GVSYK*VFTFLRPRFKDSGSLELRLE 358
+ +S +++ FT +RP D S +L LE
Sbjct: 269 LGVSLVTAITFIGYFTPVRPLVADLFSFQLDLE 301


>tr|A3KZ27|A3KZ27_PSEAE Putative uncharacterized protein
OS=Pseudomonas aeruginosa C3719 GN=PACG_03044 PE=4 SV=1
Length = 573

Score = 34.7 bits (78), Expect = 2.5
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Frame = +2

Query: 89 VEVLSGLGWCPLDHMGSRAVWQFLDCNRVQEGAIQCMDLVGVACTSNEAQIRKLQKPRSW 268
+ V +G WC S W F+ C +V EG + S +RK K W
Sbjct: 209 ITVFAGRVWCGYTCPQSVWTWVFMWCEKVTEGDRNARIKLDQGPASAAKLLRKTAKHALW 268

Query: 269 VYLS---GVSYK*VFTFLRPRFKDSGSLELRLE 358
+ +S +++ FT +RP D S +L LE
Sbjct: 269 LGVSLVTAITFIGYFTPVRPLVADLFSFQLDLE 301


>tr|A7XUU4|A7XUU4_COCPO Chitobiase 2 OS=Coccidioides posadasii PE=2
SV=1
Length = 603

Score = 33.9 bits (76), Expect = 4.2
Identities = 19/56 (33%), Positives = 25/56 (44%)
Frame = +2

Query: 14 RRAQFMMPTRLFRLHIRATDCKIWPVEVLSGLGWCPLDHMGSRAVWQFLDCNRVQE 181
R M +L RLHI ATD + WP+++ S R VW D VQ+
Sbjct: 234 RTIDAMASVKLNRLHIHATDSQSWPLDIPSLPSLAAKAAYHPRLVWSSSDLRNVQK 289


>tr|Q88H22|Q88H22_PSEPK Iron-sulfur cluster-binding protein
OS=Pseudomonas putida (strain KT2440) GN=PP3543 PE=4
SV=1
Length = 467

Score = 32.7 bits (73), Expect = 9.4
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +2

Query: 80 IWPVEVLSGLGWCPLDHMGSRAVWQFLDCNRVQEGAIQCMDLVGVACTSNEAQIRKLQKP 259
++ + V +G WC S W F+ C +V EG + A S R+ K
Sbjct: 99 LFAITVYAGRVWCGYSCPQSTWTWLFMWCEKVTEGDRNQRIKLAAAPWSLNKLARRTLKH 158

Query: 260 RSWV---YLSGVSYK*VFTFLRPRFKDSGSLEL 349
W+ L+G+++ FT +RP + +L+L
Sbjct: 159 SLWLAIGVLTGLTFVGYFTPIRPLAAELLTLQL 191


>tr|A5W2L0|A5W2L0_PSEP1 Cytochrome c oxidase cbb3 type, accessory
protein FixG OS=Pseudomonas putida (strain F1 / ATCC
700007) GN=Pput_2231 PE=4 SV=1
Length = 467

Score = 32.7 bits (73), Expect = 9.4
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = +2

Query: 80 IWPVEVLSGLGWCPLDHMGSRAVWQFLDCNRVQEGAIQCMDLVGVACTSNEAQIRKLQKP 259
++ + V +G WC S W F+ C +V EG + A S R+ K
Sbjct: 99 LFAITVYAGRVWCGYSCPQSTWTWLFMWCEKVTEGDRNQRIKLAAAPWSLNKLARRTLKH 158

Query: 260 RSWV---YLSGVSYK*VFTFLRPRFKDSGSLEL 349
W+ L+G+++ FT +RP + +L+L
Sbjct: 159 SLWLAIGVLTGLTFVGYFTPIRPLAAELLTLQL 191


>tr|A4VKK9|A4VKK9_PSEU5 Probable ferredoxin OS=Pseudomonas stutzeri
(strain A1501) GN=PST_1836 PE=4 SV=1
Length = 470

Score = 32.7 bits (73), Expect = 9.4
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 3/90 (3%)
Frame = +2

Query: 89 VEVLSGLGWCPLDHMGSRAVWQFLDCNRVQEGAIQCMDLVGVACTSNEAQIRKLQKPRSW 268
+ V +G WC S W F+ +V EG + A S IRKL K W
Sbjct: 105 ITVFAGRVWCGYTCPQSVFTWVFMWAEKVTEGDRNQRMKLDKAPMSGGKFIRKLGKHSIW 164

Query: 269 VYLS---GVSYK*VFTFLRPRFKDSGSLEL 349
+++S GV++ FT +R D +L++
Sbjct: 165 LFVSFATGVTFVGYFTPIRELVPDLLTLQV 194