BP914599 |
Clone id |
YMU001_000060_G11 |
Library |
YMU01 |
Length |
358 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000060_G11. |
Accession |
BP914599 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CAGGGTATAGGCACGTAGAGCTCAATTTATGATGCCTACCCGTCTTTTTAGATTGCATAT TAGAGCTACAGATTGCAAGATATGGCCAGTTGAAGTTTTGTCGGGGCTAGGTTGGTGCCC ACTTGACCACATGGGGAGTCGTGCCGTCTGGCAATTTTTGGATTGTAACAGAGTTCAAGA AGGTGCTATACAGTGTATGGATCTAGTAGGAGTTGCCTGCACTTCAAACGAAGCCCAAAT CAGGAAGTTACAAAAGCCGAGAAGCTGGGTGTATTTGTCCGGAGTTAGCTACAAATAAGT ATTCACATTTTTGCGGCCTCGGTTCAAGGACTCGGGGAGTCTTGAGTTGCGGCTAGAG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9P6N5 |
Definition |
sp|Q9P6N5|DS1PP_SCHPO Dihydrosphingosine 1-phosphate phosphatase C823.11 OS=Schizosaccharomyces pombe |
Align length |
41 |
Score (bit) |
30.4 |
E-value |
2.9 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A6UZW1 |
Definition |
tr|A6UZW1|A6UZW1_PSEA7 Cytochrome c oxidase accessory protein CcoG OS=Pseudomonas aeruginosa (strain PA7) |
Align length |
93 |
Score (bit) |
35.4 |
E-value |
1.4 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914599|Adiantum capillus-veneris mRNA, clone: YMU001_000060_G11. (358 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A6UZW1|A6UZW1_PSEA7 Cytochrome c oxidase accessory protein Cc... 35 1.4 tr|Q9HWQ0|Q9HWQ0_PSEAE Probable iron-sulfur protein OS=Pseudomon... 35 2.5 tr|Q02SU5|Q02SU5_PSEAB Putative iron-sulfur cluster-binding prot... 35 2.5 tr|B7V6L9|B7V6L9_PSEAE Probable iron-sulfur protein OS=Pseudomon... 35 2.5 tr|A3LFM6|A3LFM6_PSEAE Putative uncharacterized protein OS=Pseud... 35 2.5 tr|A3KZ27|A3KZ27_PSEAE Putative uncharacterized protein OS=Pseud... 35 2.5 tr|A7XUU4|A7XUU4_COCPO Chitobiase 2 OS=Coccidioides posadasii PE... 34 4.2 tr|Q88H22|Q88H22_PSEPK Iron-sulfur cluster-binding protein OS=Ps... 33 9.4 tr|A5W2L0|A5W2L0_PSEP1 Cytochrome c oxidase cbb3 type, accessory... 33 9.4 tr|A4VKK9|A4VKK9_PSEU5 Probable ferredoxin OS=Pseudomonas stutze... 33 9.4
>tr|A6UZW1|A6UZW1_PSEA7 Cytochrome c oxidase accessory protein CcoG OS=Pseudomonas aeruginosa (strain PA7) GN=ccoG2 PE=4 SV=1 Length = 476
Score = 35.4 bits (80), Expect = 1.4 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 3/93 (3%) Frame = +2
Query: 89 VEVLSGLGWCPLDHMGSRAVWQFLDCNRVQEGAIQCMDLVGVACTSNEAQIRKLQKPRSW 268 + V +G WC S W F+ C +V EG + S +RK K W Sbjct: 112 ITVFAGRVWCGYTCPQSVWTWVFMRCEKVTEGDRNARIKLDQGPASAAKLLRKTAKHALW 171
Query: 269 VYLS---GVSYK*VFTFLRPRFKDSGSLELRLE 358 + +S +++ FT +RP D S +L LE Sbjct: 172 LGVSLVTAITFIGYFTPVRPLVADLFSFQLDLE 204
>tr|Q9HWQ0|Q9HWQ0_PSEAE Probable iron-sulfur protein OS=Pseudomonas aeruginosa GN=PA4131 PE=4 SV=1 Length = 573
Score = 34.7 bits (78), Expect = 2.5 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 3/93 (3%) Frame = +2
Query: 89 VEVLSGLGWCPLDHMGSRAVWQFLDCNRVQEGAIQCMDLVGVACTSNEAQIRKLQKPRSW 268 + V +G WC S W F+ C +V EG + S +RK K W Sbjct: 209 ITVFAGRVWCGYTCPQSVWTWVFMWCEKVTEGDRNARIKLDQGPASAAKLLRKTAKHALW 268
Query: 269 VYLS---GVSYK*VFTFLRPRFKDSGSLELRLE 358 + +S +++ FT +RP D S +L LE Sbjct: 269 LGVSLVTAITFIGYFTPVRPLVADLFSFQLDLE 301
>tr|Q02SU5|Q02SU5_PSEAB Putative iron-sulfur cluster-binding protein OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=PA14_10540 PE=4 SV=1 Length = 573
Score = 34.7 bits (78), Expect = 2.5 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 3/93 (3%) Frame = +2
Query: 89 VEVLSGLGWCPLDHMGSRAVWQFLDCNRVQEGAIQCMDLVGVACTSNEAQIRKLQKPRSW 268 + V +G WC S W F+ C +V EG + S +RK K W Sbjct: 209 ITVFAGRVWCGYTCPQSVWTWVFMWCEKVTEGDRNARIKLDQGPASAAKLLRKTAKHALW 268
Query: 269 VYLS---GVSYK*VFTFLRPRFKDSGSLELRLE 358 + +S +++ FT +RP D S +L LE Sbjct: 269 LGVSLVTAITFIGYFTPVRPLVADLFSFQLDLE 301
>tr|B7V6L9|B7V6L9_PSEAE Probable iron-sulfur protein OS=Pseudomonas aeruginosa LESB58 GN=PLES_08401 PE=4 SV=1 Length = 573
Score = 34.7 bits (78), Expect = 2.5 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 3/93 (3%) Frame = +2
Query: 89 VEVLSGLGWCPLDHMGSRAVWQFLDCNRVQEGAIQCMDLVGVACTSNEAQIRKLQKPRSW 268 + V +G WC S W F+ C +V EG + S +RK K W Sbjct: 209 ITVFAGRVWCGYTCPQSVWTWVFMWCEKVTEGDRNARIKLDQGPASAAKLLRKTAKHALW 268
Query: 269 VYLS---GVSYK*VFTFLRPRFKDSGSLELRLE 358 + +S +++ FT +RP D S +L LE Sbjct: 269 LGVSLVTAITFIGYFTPVRPLVADLFSFQLDLE 301
>tr|A3LFM6|A3LFM6_PSEAE Putative uncharacterized protein OS=Pseudomonas aeruginosa 2192 GN=PA2G_03582 PE=4 SV=1 Length = 573
Score = 34.7 bits (78), Expect = 2.5 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 3/93 (3%) Frame = +2
Query: 89 VEVLSGLGWCPLDHMGSRAVWQFLDCNRVQEGAIQCMDLVGVACTSNEAQIRKLQKPRSW 268 + V +G WC S W F+ C +V EG + S +RK K W Sbjct: 209 ITVFAGRVWCGYTCPQSVWTWVFMWCEKVTEGDRNARIKLDQGPASAAKLLRKTAKHALW 268
Query: 269 VYLS---GVSYK*VFTFLRPRFKDSGSLELRLE 358 + +S +++ FT +RP D S +L LE Sbjct: 269 LGVSLVTAITFIGYFTPVRPLVADLFSFQLDLE 301
>tr|A3KZ27|A3KZ27_PSEAE Putative uncharacterized protein OS=Pseudomonas aeruginosa C3719 GN=PACG_03044 PE=4 SV=1 Length = 573
Score = 34.7 bits (78), Expect = 2.5 Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 3/93 (3%) Frame = +2
Query: 89 VEVLSGLGWCPLDHMGSRAVWQFLDCNRVQEGAIQCMDLVGVACTSNEAQIRKLQKPRSW 268 + V +G WC S W F+ C +V EG + S +RK K W Sbjct: 209 ITVFAGRVWCGYTCPQSVWTWVFMWCEKVTEGDRNARIKLDQGPASAAKLLRKTAKHALW 268
Query: 269 VYLS---GVSYK*VFTFLRPRFKDSGSLELRLE 358 + +S +++ FT +RP D S +L LE Sbjct: 269 LGVSLVTAITFIGYFTPVRPLVADLFSFQLDLE 301
>tr|A7XUU4|A7XUU4_COCPO Chitobiase 2 OS=Coccidioides posadasii PE=2 SV=1 Length = 603
Score = 33.9 bits (76), Expect = 4.2 Identities = 19/56 (33%), Positives = 25/56 (44%) Frame = +2
Query: 14 RRAQFMMPTRLFRLHIRATDCKIWPVEVLSGLGWCPLDHMGSRAVWQFLDCNRVQE 181 R M +L RLHI ATD + WP+++ S R VW D VQ+ Sbjct: 234 RTIDAMASVKLNRLHIHATDSQSWPLDIPSLPSLAAKAAYHPRLVWSSSDLRNVQK 289
>tr|Q88H22|Q88H22_PSEPK Iron-sulfur cluster-binding protein OS=Pseudomonas putida (strain KT2440) GN=PP3543 PE=4 SV=1 Length = 467
Score = 32.7 bits (73), Expect = 9.4 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 3/93 (3%) Frame = +2
Query: 80 IWPVEVLSGLGWCPLDHMGSRAVWQFLDCNRVQEGAIQCMDLVGVACTSNEAQIRKLQKP 259 ++ + V +G WC S W F+ C +V EG + A S R+ K Sbjct: 99 LFAITVYAGRVWCGYSCPQSTWTWLFMWCEKVTEGDRNQRIKLAAAPWSLNKLARRTLKH 158
Query: 260 RSWV---YLSGVSYK*VFTFLRPRFKDSGSLEL 349 W+ L+G+++ FT +RP + +L+L Sbjct: 159 SLWLAIGVLTGLTFVGYFTPIRPLAAELLTLQL 191
>tr|A5W2L0|A5W2L0_PSEP1 Cytochrome c oxidase cbb3 type, accessory protein FixG OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=Pput_2231 PE=4 SV=1 Length = 467
Score = 32.7 bits (73), Expect = 9.4 Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 3/93 (3%) Frame = +2
Query: 80 IWPVEVLSGLGWCPLDHMGSRAVWQFLDCNRVQEGAIQCMDLVGVACTSNEAQIRKLQKP 259 ++ + V +G WC S W F+ C +V EG + A S R+ K Sbjct: 99 LFAITVYAGRVWCGYSCPQSTWTWLFMWCEKVTEGDRNQRIKLAAAPWSLNKLARRTLKH 158
Query: 260 RSWV---YLSGVSYK*VFTFLRPRFKDSGSLEL 349 W+ L+G+++ FT +RP + +L+L Sbjct: 159 SLWLAIGVLTGLTFVGYFTPIRPLAAELLTLQL 191
>tr|A4VKK9|A4VKK9_PSEU5 Probable ferredoxin OS=Pseudomonas stutzeri (strain A1501) GN=PST_1836 PE=4 SV=1 Length = 470
Score = 32.7 bits (73), Expect = 9.4 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 3/90 (3%) Frame = +2
Query: 89 VEVLSGLGWCPLDHMGSRAVWQFLDCNRVQEGAIQCMDLVGVACTSNEAQIRKLQKPRSW 268 + V +G WC S W F+ +V EG + A S IRKL K W Sbjct: 105 ITVFAGRVWCGYTCPQSVFTWVFMWAEKVTEGDRNQRMKLDKAPMSGGKFIRKLGKHSIW 164
Query: 269 VYLS---GVSYK*VFTFLRPRFKDSGSLEL 349 +++S GV++ FT +R D +L++ Sbjct: 165 LFVSFATGVTFVGYFTPIRELVPDLLTLQV 194
|