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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914605
Clone id YMU001_000060_H05
Library
Length 466
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000060_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TCTAGGACGAGTACATTTGTGGAGTTTTACAAATACACAAACAGTAGGCAGCCTTCATGT
GCAACTTGCGGCTGGAAGCGACAGACTGCTTGTACAGGAAAAGTCTTTAAGAATATTGCG
TGAAGCTGGAATTCTGGATCTTACATTGCAGATTGAGGATGTTTCATGATCAATATCAAG
AAGATATGAGTTGTAATTACTTTGAGAACACAAAGAAGGCTCATAACACATCACCCAGTA
TCTCTCAGTTTAGTCCTGTGATGGTTTTACTGATAGCAGATAGTACAAAACGTTTGATAC
CATGTTATGAGCAGCCAATGATGAGATGGCATTTTTGGCTGTTTTAATGTGTAAGCTGAA
GCTGGCCCGATGTACATTTTGGTAAAATCAAACCTCACCAATGATAGTTGTATCAGGTTT
TTTATGTGCCATTAAATTTATGCTTTCAAACAAAAAAAAAAAAAAA
■■Homology search results ■■ -
sp_hit_id P20107
Definition sp|P20107|ZRC1_YEAST Zinc/cadmium resistance protein OS=Saccharomyces cerevisiae
Align length 65
Score (bit) 37.4
E-value 0.029
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914605|Adiantum capillus-veneris mRNA, clone:
YMU001_000060_H05.
         (447 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P20107|ZRC1_YEAST Zinc/cadmium resistance protein OS=Saccharo...    37   0.029
sp|Q8BGG0|ZNT8_MOUSE Zinc transporter 8 OS=Mus musculus GN=Slc30...    35   0.11 
sp|Q5ZLF4|ZNT5_CHICK Zinc transporter 5 OS=Gallus gallus GN=SLC3...    35   0.14 
sp|Q8TAD4|ZNT5_HUMAN Zinc transporter 5 OS=Homo sapiens GN=SLC30...    34   0.32 
sp|Q28CE7|ZNT5_XENTR Zinc transporter 5 OS=Xenopus tropicalis GN...    33   0.42 
sp|Q8R4H9|ZNT5_MOUSE Zinc transporter 5 OS=Mus musculus GN=Slc30...    33   0.42 
sp|Q6DG36|ZNT5_DANRE Zinc transporter 5 OS=Danio rerio GN=slc30a...    33   0.42 
sp|Q9BRI3|ZNT2_HUMAN Zinc transporter 2 OS=Homo sapiens GN=SLC30...    33   0.42 
sp|Q3UVU3|ZNT10_MOUSE Zinc transporter 10 OS=Mus musculus GN=Slc...    33   0.54 
sp|Q6QIX3|ZNT3_RAT Zinc transporter 3 OS=Rattus norvegicus GN=Sl...    33   0.71 
sp|Q5R617|ZNT3_PONAB Zinc transporter 3 OS=Pongo abelii GN=SLC30...    32   0.93 
sp|P97441|ZNT3_MOUSE Zinc transporter 3 OS=Mus musculus GN=Slc30...    32   0.93 
sp|Q99726|ZNT3_HUMAN Zinc transporter 3 OS=Homo sapiens GN=SLC30...    32   0.93 
sp|Q08E25|ZNT3_BOVIN Zinc transporter 3 OS=Bos taurus GN=SLC30A3...    32   1.2  
sp|Q6ICY4|MTPC2_ARATH Metal tolerance protein C2 OS=Arabidopsis ...    32   1.2  
sp|Q6XR72|ZNT10_HUMAN Zinc transporter 10 OS=Homo sapiens GN=SLC...    31   2.1  
sp|Q1ACE9|NU4C_CHAVU NAD(P)H-quinone oxidoreductase chain 4, chl...    30   4.6  
sp|P32798|COT1_YEAST Cobalt uptake protein COT1 OS=Saccharomyces...    30   4.6  

>sp|P20107|ZRC1_YEAST Zinc/cadmium resistance protein
           OS=Saccharomyces cerevisiae GN=ZRC1 PE=1 SV=2
          Length = 442

 Score = 37.4 bits (85), Expect = 0.029
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
 Frame = +2

Query: 14  HLWSFTNTQTVGSLHVQLAAGSDRLLVQEKSLR-ILREAGILDLTLQIE----DVS*SIS 178
           H+W+ T +  + S+HVQ+    D+ +   K +R I  + GI   T+Q E    DV+  I 
Sbjct: 324 HVWNLTESIYIASIHVQIDCAPDKFMSSAKLIRKIFHQHGIHSATVQPEFVSGDVNEDIR 383

Query: 179 RRYEL 193
           RR+ +
Sbjct: 384 RRFSI 388


>sp|Q8BGG0|ZNT8_MOUSE Zinc transporter 8 OS=Mus musculus GN=Slc30a8
           PE=2 SV=1
          Length = 367

 Score = 35.4 bits (80), Expect = 0.11
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = +2

Query: 11  VHLWSFTNTQTVGSLHVQLAAGSDRLLVQEKSLRILREAGILDLTLQIEDVS 166
           +H+WS T  Q + S+HV  AA  D   V+    + L    +  LT+QIE  +
Sbjct: 302 LHIWSLTVNQVILSVHVATAASQDSQSVRTGIAQALSSFDLHSLTIQIESAA 353


>sp|Q5ZLF4|ZNT5_CHICK Zinc transporter 5 OS=Gallus gallus GN=SLC30A5
           PE=2 SV=1
          Length = 770

 Score = 35.0 bits (79), Expect = 0.14
 Identities = 14/48 (29%), Positives = 29/48 (60%)
 Frame = +2

Query: 14  HLWSFTNTQTVGSLHVQLAAGSDRLLVQEKSLRILREAGILDLTLQIE 157
           H W  + +   G++HVQ+ +      + ++   IL++AG+ +LT+Q+E
Sbjct: 685 HFWCHSASVVAGTIHVQVVSDVMEQRIVQQVTAILKDAGVNNLTVQVE 732


>sp|Q8TAD4|ZNT5_HUMAN Zinc transporter 5 OS=Homo sapiens GN=SLC30A5
           PE=1 SV=1
          Length = 765

 Score = 33.9 bits (76), Expect = 0.32
 Identities = 13/48 (27%), Positives = 29/48 (60%)
 Frame = +2

Query: 14  HLWSFTNTQTVGSLHVQLAAGSDRLLVQEKSLRILREAGILDLTLQIE 157
           H W  + +   G++H+Q+ +      + ++   IL++AG+ +LT+Q+E
Sbjct: 680 HFWRHSASIVAGTIHIQVTSDVLEQRIVQQVTGILKDAGVNNLTIQVE 727


>sp|Q28CE7|ZNT5_XENTR Zinc transporter 5 OS=Xenopus tropicalis
           GN=slc30a5 PE=2 SV=1
          Length = 777

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 13/48 (27%), Positives = 29/48 (60%)
 Frame = +2

Query: 14  HLWSFTNTQTVGSLHVQLAAGSDRLLVQEKSLRILREAGILDLTLQIE 157
           H W  + +   G++HVQ+ +      + ++   +L++AG+ +LT+Q+E
Sbjct: 692 HFWRHSASLVAGTIHVQVMSDVVEQRIIQQVTSLLKDAGVNNLTVQVE 739


>sp|Q8R4H9|ZNT5_MOUSE Zinc transporter 5 OS=Mus musculus GN=Slc30a5
           PE=2 SV=1
          Length = 761

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 13/48 (27%), Positives = 29/48 (60%)
 Frame = +2

Query: 14  HLWSFTNTQTVGSLHVQLAAGSDRLLVQEKSLRILREAGILDLTLQIE 157
           H W  + +   G++H+Q+ +      + ++   IL++AG+ +LT+Q+E
Sbjct: 676 HFWRHSASIVAGTIHIQVTSEVLEQRIVQQVTGILKDAGVNNLTIQVE 723


>sp|Q6DG36|ZNT5_DANRE Zinc transporter 5 OS=Danio rerio GN=slc30a5
           PE=2 SV=1
          Length = 775

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 14/48 (29%), Positives = 29/48 (60%)
 Frame = +2

Query: 14  HLWSFTNTQTVGSLHVQLAAGSDRLLVQEKSLRILREAGILDLTLQIE 157
           H W  + +   G++H+QL +      V ++   +L++AG+ +LT+Q+E
Sbjct: 690 HFWRHSASVIAGTIHLQLMSDVVEQRVIQQVSAVLKDAGVNNLTIQLE 737


>sp|Q9BRI3|ZNT2_HUMAN Zinc transporter 2 OS=Homo sapiens GN=SLC30A2
           PE=2 SV=1
          Length = 323

 Score = 33.5 bits (75), Expect = 0.42
 Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
 Frame = +2

Query: 2   LGRVHLWSFTNTQTVGSLHVQLAAGSD-RLLVQEKSLRILREAGILDLTLQIEDVS 166
           L  +H+W+ T  Q V S+H+ +A  +D + +++  S R+  +     +T+QIED S
Sbjct: 254 LHSLHIWALTVAQPVLSVHIAIAQNTDAQAVLKTASSRLQGKFHFHTVTIQIEDYS 309


>sp|Q3UVU3|ZNT10_MOUSE Zinc transporter 10 OS=Mus musculus
           GN=Slc30a10 PE=1 SV=1
          Length = 470

 Score = 33.1 bits (74), Expect = 0.54
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +2

Query: 11  VHLWSFTNTQTVGSLHVQLAAGSDRLLVQEKSLRILREAGILDLTLQIE 157
           VH+W   + + + +LH++   G++      K   I   AGI ++T+Q E
Sbjct: 327 VHIWELISGKIIATLHIKHQKGTEYQDASRKIREIFHHAGIHNVTIQFE 375


>sp|Q6QIX3|ZNT3_RAT Zinc transporter 3 OS=Rattus norvegicus
           GN=Slc30a3 PE=2 SV=1
          Length = 388

 Score = 32.7 bits (73), Expect = 0.71
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +2

Query: 11  VHLWSFTNTQTVGSLHVQLAAGSD-RLLVQEKSLRILREAGILDLTLQIE 157
           +HLW+ T T  V S H+ + + +D   ++ E S R+    G    TLQ+E
Sbjct: 321 LHLWALTLTYHVASAHLAIDSTADPEAILAEASSRLYSRFGFSSCTLQVE 370
tr_hit_id A9U3T1
Definition tr|A9U3T1|A9U3T1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 51
Score (bit) 55.5
E-value 1.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914605|Adiantum capillus-veneris mRNA, clone:
YMU001_000060_H05.
         (447 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9U3T1|A9U3T1_PHYPA Predicted protein OS=Physcomitrella paten...    55   1e-06
tr|Q9SI03|Q9SI03_ARATH Putative cation transport protein OS=Arab...    53   7e-06
tr|A7PMH0|A7PMH0_VITVI Chromosome chr14 scaffold_21, whole genom...    53   7e-06
tr|Q8H329|Q8H329_ORYSJ Putative zinc transporter OS=Oryza sativa...    53   9e-06
tr|Q7XZF0|Q7XZF0_ORYSJ Os08g0422200 protein (Fragment) OS=Oryza ...    53   9e-06
tr|A3BT86|A3BT86_ORYSJ Putative uncharacterized protein OS=Oryza...    53   9e-06
tr|B7Q3T0|B7Q3T0_IXOSC Cation efflux protein/ zinc transporter, ...    38   0.28 
tr|Q06808|Q06808_YEAST Oxidative stress resistance OS=Saccharomy...    37   0.37 
tr|B5VQ12|B5VQ12_YEAS6 YMR243Cp-like protein (Fragment) OS=Sacch...    37   0.37 
tr|B3LMD2|B3LMD2_YEAS1 Zinc/cadmium resistance protein OS=Saccha...    37   0.37 
tr|A6ZMV7|A6ZMV7_YEAS7 Zinc resistance conferring protein OS=Sac...    37   0.37 
tr|A8NFV4|A8NFV4_BRUMA Cation efflux family protein OS=Brugia ma...    37   0.48 
tr|Q75D95|Q75D95_ASHGO ABR129Cp OS=Ashbya gossypii GN=ABR129C PE...    37   0.48 
tr|Q4JUP0|Q4JUP0_CORJK Cobalt-zinc-cadmium resistance protein OS...    37   0.63 
tr|B6P5D2|B6P5D2_BRAFL Putative uncharacterized protein OS=Branc...    36   0.82 
tr|A8WFU0|A8WFU0_DANRE Slc30a10 protein OS=Danio rerio GN=slc30a...    36   1.1  
tr|Q7SDU7|Q7SDU7_NEUCR Putative uncharacterized protein (Related...    36   1.1  
tr|Q6FMK2|Q6FMK2_CANGA Strain CBS138 chromosome K complete seque...    35   1.4  
tr|B6M620|B6M620_BRAFL Putative uncharacterized protein (Fragmen...    35   1.8  
tr|Q2HEW5|Q2HEW5_CHAGB Putative uncharacterized protein OS=Chaet...    35   1.9  
tr|Q4REH2|Q4REH2_TETNG Chromosome 10 SCAF15123, whole genome sho...    34   3.1  
tr|A8E5Z7|A8E5Z7_XENLA LOC100126632 protein OS=Xenopus laevis GN...    34   3.1  
tr|B1TYU7|B1TYU7_MICLU Cation diffusion facilitator family trans...    34   3.1  
tr|B6ECZ1|B6ECZ1_PIG Solute carrier family 30 member 5 OS=Sus sc...    34   3.1  
tr|Q5KK51|Q5KK51_CRYNE Di-, tri-valent inorganic cation transpor...    34   3.1  
tr|Q55W43|Q55W43_CRYNE Putative uncharacterized protein OS=Crypt...    34   3.1  
tr|Q1DQ32|Q1DQ32_COCIM Putative uncharacterized protein OS=Cocci...    34   3.1  
tr|A7SNW3|A7SNW3_NEMVE Predicted protein (Fragment) OS=Nematoste...    34   4.1  
tr|Q9H9X0|Q9H9X0_HUMAN cDNA FLJ12496 fis, clone NT2RM2001659, we...    34   4.1  
tr|Q9BY48|Q9BY48_HUMAN Putative disease resistance protein OS=Ho...    34   4.1  

>tr|A9U3T1|A9U3T1_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_155705 PE=4 SV=1
          Length = 396

 Score = 55.5 bits (132), Expect = 1e-06
 Identities = 24/51 (47%), Positives = 36/51 (70%)
 Frame = +2

Query: 11  VHLWSFTNTQTVGSLHVQLAAGSDRLLVQEKSLRILREAGILDLTLQIEDV 163
           +H+W+FTN + +GSLHV    G+DR  ++     IL++AG+ DLTLQ+E V
Sbjct: 346 LHIWNFTNAEVIGSLHVLATRGADRERLRISIAGILKKAGVTDLTLQVETV 396


>tr|Q9SI03|Q9SI03_ARATH Putative cation transport protein
           OS=Arabidopsis thaliana GN=At2g04620 PE=2 SV=1
          Length = 300

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 23/53 (43%), Positives = 38/53 (71%)
 Frame = +2

Query: 8   RVHLWSFTNTQTVGSLHVQLAAGSDRLLVQEKSLRILREAGILDLTLQIEDVS 166
           R+H+WSFTN+  V +LH+ ++A SD+   + +  R+L +AG+ D TLQ+E V+
Sbjct: 247 RLHVWSFTNSDVVATLHLLVSADSDKTDTKLQVSRLLEDAGVKDWTLQVESVN 299


>tr|A7PMH0|A7PMH0_VITVI Chromosome chr14 scaffold_21, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00020819001
           PE=4 SV=1
          Length = 521

 Score = 53.1 bits (126), Expect = 7e-06
 Identities = 23/51 (45%), Positives = 36/51 (70%)
 Frame = +2

Query: 11  VHLWSFTNTQTVGSLHVQLAAGSDRLLVQEKSLRILREAGILDLTLQIEDV 163
           +H+WSFTNT  VG+LH+ ++  +D+   + +   IL +AGI DLT+Q+E V
Sbjct: 468 LHVWSFTNTDVVGTLHLHISTEADKASTKVQVSNILHDAGIKDLTVQVEYV 518


>tr|Q8H329|Q8H329_ORYSJ Putative zinc transporter OS=Oryza sativa
           subsp. japonica GN=OSJNBa0077M12.119 PE=4 SV=1
          Length = 800

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 23/50 (46%), Positives = 34/50 (68%)
 Frame = +2

Query: 14  HLWSFTNTQTVGSLHVQLAAGSDRLLVQEKSLRILREAGILDLTLQIEDV 163
           H+W+ TNT  VG+ H+ +   +D+  ++EK+  I  EAGI DLT+QIE V
Sbjct: 749 HVWNLTNTDIVGTFHLHITTEADKSSIREKASDIFHEAGIQDLTIQIECV 798


>tr|Q7XZF0|Q7XZF0_ORYSJ Os08g0422200 protein (Fragment) OS=Oryza
           sativa subsp. japonica GN=Os08g0422200 PE=2 SV=1
          Length = 225

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 23/50 (46%), Positives = 34/50 (68%)
 Frame = +2

Query: 14  HLWSFTNTQTVGSLHVQLAAGSDRLLVQEKSLRILREAGILDLTLQIEDV 163
           H+W+ TNT  VG+ H+ +   +D+  ++EK+  I  EAGI DLT+QIE V
Sbjct: 174 HVWNLTNTDIVGTFHLHITTEADKSSIREKASDIFHEAGIQDLTIQIECV 223


>tr|A3BT86|A3BT86_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_026258 PE=4 SV=1
          Length = 800

 Score = 52.8 bits (125), Expect = 9e-06
 Identities = 23/50 (46%), Positives = 34/50 (68%)
 Frame = +2

Query: 14  HLWSFTNTQTVGSLHVQLAAGSDRLLVQEKSLRILREAGILDLTLQIEDV 163
           H+W+ TNT  VG+ H+ +   +D+  ++EK+  I  EAGI DLT+QIE V
Sbjct: 749 HVWNLTNTDIVGTFHLHITTEADKSSIREKASDIFHEAGIQDLTIQIECV 798


>tr|B7Q3T0|B7Q3T0_IXOSC Cation efflux protein/ zinc transporter,
           putative (Fragment) OS=Ixodes scapularis
           GN=IscW_ISCW009193 PE=4 SV=1
          Length = 343

 Score = 37.7 bits (86), Expect = 0.28
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = +2

Query: 14  HLWSFTNTQTVGSLHVQLAAGSDRLLVQEKSLRILREAGILDLTLQIE 157
           HLW  TNT+ + ++H+ + + +  + + +K  R   E GI  +T+Q E
Sbjct: 292 HLWQLTNTRAIATVHIVVGSHAVYIAIADKVSRFFYEQGISSMTVQPE 339


>tr|Q06808|Q06808_YEAST Oxidative stress resistance OS=Saccharomyces
           cerevisiae GN=ZRC1 PE=2 SV=1
          Length = 429

 Score = 37.4 bits (85), Expect = 0.37
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
 Frame = +2

Query: 14  HLWSFTNTQTVGSLHVQLAAGSDRLLVQEKSLR-ILREAGILDLTLQIE----DVS*SIS 178
           H+W+ T +  + S+HVQ+    D+ +   K +R I  + GI   T+Q E    DV+  I 
Sbjct: 324 HVWNLTESIYIASIHVQIDCAPDKFMSSAKLIRKIFHQHGIHSATVQPEFVSGDVNEDIR 383

Query: 179 RRYEL 193
           RR+ +
Sbjct: 384 RRFSI 388


>tr|B5VQ12|B5VQ12_YEAS6 YMR243Cp-like protein (Fragment)
           OS=Saccharomyces cerevisiae (strain AWRI1631)
           GN=AWRI1631_133830 PE=4 SV=1
          Length = 423

 Score = 37.4 bits (85), Expect = 0.37
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
 Frame = +2

Query: 14  HLWSFTNTQTVGSLHVQLAAGSDRLLVQEKSLR-ILREAGILDLTLQIE----DVS*SIS 178
           H+W+ T +  + S+HVQ+    D+ +   K +R I  + GI   T+Q E    DV+  I 
Sbjct: 324 HVWNLTESIYIASIHVQIDCAPDKFMSSAKLIRKIFHQHGIHSATVQPEFVSGDVNEDIR 383

Query: 179 RRYEL 193
           RR+ +
Sbjct: 384 RRFSI 388


>tr|B3LMD2|B3LMD2_YEAS1 Zinc/cadmium resistance protein
           OS=Saccharomyces cerevisiae (strain RM11-1a)
           GN=SCRG_02139 PE=4 SV=1
          Length = 442

 Score = 37.4 bits (85), Expect = 0.37
 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
 Frame = +2

Query: 14  HLWSFTNTQTVGSLHVQLAAGSDRLLVQEKSLR-ILREAGILDLTLQIE----DVS*SIS 178
           H+W+ T +  + S+HVQ+    D+ +   K +R I  + GI   T+Q E    DV+  I 
Sbjct: 324 HVWNLTESIYIASIHVQIDCAPDKFMSSAKLIRKIFHQHGIHSATVQPEFVSGDVNEDIR 383

Query: 179 RRYEL 193
           RR+ +
Sbjct: 384 RRFSI 388