BP914607 |
Clone id |
YMU001_000060_H07 |
Library |
YMU01 |
Length |
618 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000060_H07. |
Accession |
BP914607 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL274Contig1 |
Sequence |
GCCACAAATGTAGCGAGTACCATCCTAACCAAGTCCACAAACCATGGCTTTTAACAGAAG GGAAGCCACAAACCCATACAACTAGATACATAAAGCCGATAATGACCATTTAGGTTGCCA CCGCTGTTGACCCTCTCCCACAGAGGAAACAGTGCCCTAAAAGACCAATGAACCAAAGCC ACCACAGTCACACATGACCAAACATCCAAGAGTCATGAACTGTCGAAATCGAAGCTATCG TTTGATACAAGCACCGGCATCTTGAATGCCACCACCATGGAAGACGCTGCCATCGTCTTC AATGGTGTCCAAGACCATGCTGCCTAAAACCATCTCCGATCGAGATCATCGGAGAACACA CAACCACACAAGGATAGATCCATGAAATCTGACAAAGCCACATCAAGGGAGACAAAACAC CAATATGCCCACCGAACTGATAGCGGTTACCACAAGACCATAGCATACATGCAACCGCAT CCACCCTTGCAAGGCAAGAATCAGGCCGCTCCACATCCCCGAACCAGTAGTCTCTCCATG CAGCAGTAGGAAAAAAAACCCCGTCCCGTCAATTCTAACCATAACTTGGCGGGCTGATTT GAGTACCTGCAGGTAATA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9WU42 |
Definition |
sp|Q9WU42|NCOR2_MOUSE Nuclear receptor corepressor 2 OS=Mus musculus |
Align length |
67 |
Score (bit) |
36.6 |
E-value |
0.11 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8VYN2 |
Definition |
tr|Q8VYN2|Q8VYN2_ARATH Putative membrane associated protein OS=Arabidopsis thaliana |
Align length |
70 |
Score (bit) |
37.0 |
E-value |
0.94 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914607|Adiantum capillus-veneris mRNA, clone: YMU001_000060_H07. (618 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8VYN2|Q8VYN2_ARATH Putative membrane associated protein OS=A... 37 0.94 tr|Q3E7Q2|Q3E7Q2_ARATH Uncharacterized protein At4g21450.2 OS=Ar... 37 0.94 tr|O65410|O65410_ARATH Putative membrane associated protein OS=A... 37 0.94 tr|B4LE96|B4LE96_DROVI GJ13031 OS=Drosophila virilis GN=GJ13031 ... 36 1.6 tr|Q1NFG3|Q1NFG3_9SPHN Hydrolase, alpha/beta hydrolase fold fami... 35 3.6 tr|B4GMN8|B4GMN8_DROPE GL12200 OS=Drosophila persimilis GN=GL122... 35 3.6 tr|Q5TH11|Q5TH11_HUMAN Protein kinase C binding protein 1 OS=Hom... 35 4.7 tr|Q2HXW1|Q2HXW1_HUMAN RACK7 isoform b OS=Homo sapiens GN=PRKCBP... 35 4.7 tr|Q2HXW0|Q2HXW0_HUMAN RACK7 isoform c OS=Homo sapiens GN=PRKCBP... 35 4.7 tr|Q2HXV7|Q2HXV7_HUMAN RACK7 isoform f OS=Homo sapiens PE=2 SV=1 35 4.7 tr|Q2HXV4|Q2HXV4_HUMAN RACK7 isoform i OS=Homo sapiens PE=2 SV=1 35 4.7 tr|Q2HXV2|Q2HXV2_HUMAN RACK7 isoform k OS=Homo sapiens PE=2 SV=1 35 4.7 tr|Q2HXV1|Q2HXV1_HUMAN RACK7 isoform l OS=Homo sapiens PE=2 SV=1 35 4.7 tr|B7ZM62|B7ZM62_HUMAN Putative uncharacterized protein OS=Homo ... 35 4.7 tr|B7Z2A8|B7Z2A8_HUMAN cDNA FLJ56888, highly similar to Protein ... 35 4.7 tr|B5DW38|B5DW38_DROPS GA26226 OS=Drosophila pseudoobscura pseud... 34 6.1 tr|B4PB92|B4PB92_DROYA GE11464 OS=Drosophila yakuba GN=GE11464 P... 34 6.1 tr|B4LWW7|B4LWW7_DROVI GJ23490 OS=Drosophila virilis GN=GJ23490 ... 34 6.1 tr|B3NVU2|B3NVU2_DROER GG17841 OS=Drosophila erecta GN=GG17841 P... 34 6.1 tr|B0WZU1|B0WZU1_CULQU Putative uncharacterized protein OS=Culex... 34 6.1 tr|Q2GV64|Q2GV64_CHAGB Putative uncharacterized protein OS=Chaet... 34 6.1 tr|Q5B408|Q5B408_EMENI Putative uncharacterized protein OS=Emeri... 34 7.8 tr|Q03NP3|Q03NP3_LACBA Putative uncharacterized protein OS=Lacto... 34 7.9 tr|B4QBY4|B4QBY4_DROSI GD24959 OS=Drosophila simulans GN=GD24959... 34 7.9
>tr|Q8VYN2|Q8VYN2_ARATH Putative membrane associated protein OS=Arabidopsis thaliana GN=At4g21450 PE=2 SV=1 Length = 295
Score = 37.0 bits (84), Expect = 0.94 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Frame = +1
Query: 331 HLRSRSSENTQPHKDRSMKSDKATSRETKHQYAHRTDSGYHKTIAYMQPHPPLQGKNQ-A 507 H + SS T P + S ++ HQ+ H+ +H + Y PH G+NQ Sbjct: 29 HRNAASSAATSPFPSGASSSSTSSHLHNHHQHHHQHHHQHHHQLGYNGPHGDGSGQNQHP 88
Query: 508 APHPRTSSLS 537 P P SS++ Sbjct: 89 TPSPSVSSVA 98
>tr|Q3E7Q2|Q3E7Q2_ARATH Uncharacterized protein At4g21450.2 OS=Arabidopsis thaliana GN=At4g21450 PE=4 SV=1 Length = 212
Score = 37.0 bits (84), Expect = 0.94 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Frame = +1
Query: 331 HLRSRSSENTQPHKDRSMKSDKATSRETKHQYAHRTDSGYHKTIAYMQPHPPLQGKNQ-A 507 H + SS T P + S ++ HQ+ H+ +H + Y PH G+NQ Sbjct: 29 HRNAASSAATSPFPSGASSSSTSSHLHNHHQHHHQHHHQHHHQLGYNGPHGDGSGQNQHP 88
Query: 508 APHPRTSSLS 537 P P SS++ Sbjct: 89 TPSPSVSSVA 98
>tr|O65410|O65410_ARATH Putative membrane associated protein OS=Arabidopsis thaliana GN=F18E5.70 PE=4 SV=1 Length = 293
Score = 37.0 bits (84), Expect = 0.94 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Frame = +1
Query: 331 HLRSRSSENTQPHKDRSMKSDKATSRETKHQYAHRTDSGYHKTIAYMQPHPPLQGKNQ-A 507 H + SS T P + S ++ HQ+ H+ +H + Y PH G+NQ Sbjct: 29 HRNAASSAATSPFPSGASSSSTSSHLHNHHQHHHQHHHQHHHQLGYNGPHGDGSGQNQHP 88
Query: 508 APHPRTSSLS 537 P P SS++ Sbjct: 89 TPSPSVSSVA 98
>tr|B4LE96|B4LE96_DROVI GJ13031 OS=Drosophila virilis GN=GJ13031 PE=4 SV=1 Length = 787
Score = 36.2 bits (82), Expect = 1.6 Identities = 42/160 (26%), Positives = 53/160 (33%), Gaps = 10/160 (6%) Frame = +2
Query: 131 PSPTEETVP*KTNEPKPPQSHMTKHPRVMNCRNRSYRLIQAPAS*MPPPWKTLPSSSMVS 310 P PT T P T +PP T P V R PPP P + + Sbjct: 346 PPPTRATPP-PTRATRPPTPPPTYLPPVTTTRRPP-----------PPPTTRAPVRTTPA 393
Query: 311 KTMLPKTISXXXXXXXXXXXXIDP*NLTKP-----HQGRQNTNMPTELIAVTTR-----P 460 T LP T P KP R T PT L VTT P Sbjct: 394 PTYLPPTNKPQPPVYTTTRRPPPPPTTRKPTPPPTRATRPPTPPPTYLPPVTTTRRPPPP 453
Query: 461 *HTCNRIHPCKARIRPLHIPEPVVSPCSSRKKNPVPSILT 580 T + +A +RP P P P +++ + PV + T Sbjct: 454 PTTRATVRTTRATVRPTSTPAPTYLPPTNKPQPPVTTRAT 493
>tr|Q1NFG3|Q1NFG3_9SPHN Hydrolase, alpha/beta hydrolase fold family protein OS=Sphingomonas sp. SKA58 GN=SKA58_14667 PE=4 SV=1 Length = 279
Score = 35.0 bits (79), Expect = 3.6 Identities = 16/46 (34%), Positives = 30/46 (65%) Frame = -1
Query: 597 SARQVMVRIDGTGFFFLLLHGETTGSGMWSGLILALQGWMRLHVCY 460 ++R++ V + G G +L+ G +G G+W+GL+ AL G+ R H+ + Sbjct: 32 ASRRIAVTVRGEGRDVVLIPGLASGPGIWNGLLSALPGY-RFHLIH 76
>tr|B4GMN8|B4GMN8_DROPE GL12200 OS=Drosophila persimilis GN=GL12200 PE=4 SV=1 Length = 1554
Score = 35.0 bits (79), Expect = 3.6 Identities = 19/85 (22%), Positives = 38/85 (44%) Frame = +1
Query: 250 STGILNATTMEDAAIVFNGVQDHAA*NHLRSRSSENTQPHKDRSMKSDKATSRETKHQYA 429 STG L ATT E + + + L+ + + + RS + +++ H + Sbjct: 450 STGNLTATTTESGNLKISYEKQTTRVQQLQEQEAPPATSRRSRSRSGESSSTSSHHHHHH 509
Query: 430 HRTDSGYHKTIAYMQPHPPLQGKNQ 504 H + + +H + + P+ P QG+ Q Sbjct: 510 HHSQNHHHTNV--VPPNHPTQGQQQ 532
>tr|Q5TH11|Q5TH11_HUMAN Protein kinase C binding protein 1 OS=Homo sapiens GN=PRKCBP1 PE=2 SV=1 Length = 1115
Score = 34.7 bits (78), Expect = 4.7 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 1/83 (1%) Frame = +1
Query: 340 SRSSENTQPHKDRSMKSDKATSRETKHQYAHRTD-SGYHKTIAYMQPHPPLQGKNQAAPH 516 S SS + P + S +K TS E + D SG +T P L G NQ + H Sbjct: 1018 SSSSTQSAPSETASASKEKETSAEKSKESGSTLDLSGSRET-----PSSILLGSNQGSDH 1072
Query: 517 PRTSSLSMQQ*EKKPRPVNSNHN 585 R++ S ++K S+HN Sbjct: 1073 SRSNKSSWSSSDEKRGSTRSDHN 1095
>tr|Q2HXW1|Q2HXW1_HUMAN RACK7 isoform b OS=Homo sapiens GN=PRKCBP1 PE=2 SV=1 Length = 1160
Score = 34.7 bits (78), Expect = 4.7 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 1/83 (1%) Frame = +1
Query: 340 SRSSENTQPHKDRSMKSDKATSRETKHQYAHRTD-SGYHKTIAYMQPHPPLQGKNQAAPH 516 S SS + P + S +K TS E + D SG +T P L G NQ + H Sbjct: 1063 SSSSTQSAPSETASASKEKETSAEKSKESGSTLDLSGSRET-----PSSILLGSNQGSDH 1117
Query: 517 PRTSSLSMQQ*EKKPRPVNSNHN 585 R++ S ++K S+HN Sbjct: 1118 SRSNKSSWSSSDEKRGSTRSDHN 1140
>tr|Q2HXW0|Q2HXW0_HUMAN RACK7 isoform c OS=Homo sapiens GN=PRKCBP1 PE=2 SV=1 Length = 1135
Score = 34.7 bits (78), Expect = 4.7 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 1/83 (1%) Frame = +1
Query: 340 SRSSENTQPHKDRSMKSDKATSRETKHQYAHRTD-SGYHKTIAYMQPHPPLQGKNQAAPH 516 S SS + P + S +K TS E + D SG +T P L G NQ + H Sbjct: 1038 SSSSTQSAPSETASASKEKETSAEKSKESGSTLDLSGSRET-----PSSILLGSNQGSDH 1092
Query: 517 PRTSSLSMQQ*EKKPRPVNSNHN 585 R++ S ++K S+HN Sbjct: 1093 SRSNKSSWSSSDEKRGSTRSDHN 1115
>tr|Q2HXV7|Q2HXV7_HUMAN RACK7 isoform f OS=Homo sapiens PE=2 SV=1 Length = 1181
Score = 34.7 bits (78), Expect = 4.7 Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 1/83 (1%) Frame = +1
Query: 340 SRSSENTQPHKDRSMKSDKATSRETKHQYAHRTD-SGYHKTIAYMQPHPPLQGKNQAAPH 516 S SS + P + S +K TS E + D SG +T P L G NQ + H Sbjct: 1084 SSSSTQSAPSETASASKEKETSAEKSKESGSTLDLSGSRET-----PSSILLGSNQGSDH 1138
Query: 517 PRTSSLSMQQ*EKKPRPVNSNHN 585 R++ S ++K S+HN Sbjct: 1139 SRSNKSSWSSSDEKRGSTRSDHN 1161
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