| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914625|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_B03.
(475 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P62634|CNBP_RAT Cellular nucleic acid-binding protein OS=Ratt... 56 7e-08
sp|Q5R5R5|CNBP_PONAB Cellular nucleic acid-binding protein OS=Po... 56 7e-08
sp|P53996|CNBP_MOUSE Cellular nucleic acid-binding protein OS=Mu... 56 7e-08
sp|P62633|CNBP_HUMAN Cellular nucleic acid-binding protein OS=Ho... 56 7e-08
sp|O42395|CNBP_CHICK Cellular nucleic acid-binding protein OS=Ga... 56 7e-08
sp|Q3T0Q6|CNBP_BOVIN Cellular nucleic acid-binding protein OS=Bo... 56 7e-08
sp|Q77373|POL_HV1AN Gag-Pol polyprotein OS=Human immunodeficienc... 55 2e-07
sp|Q77372|GAG_HV1AN Gag polyprotein OS=Human immunodeficiency vi... 55 2e-07
sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP OS=Leishmania maj... 53 6e-07
sp|Q8AII1|POL_SIVTN Gag-Pol polyprotein OS=Simian immunodeficien... 52 1e-06
sp|P17283|POL_SIVCZ Gag-Pol polyprotein OS=Simian immunodeficien... 52 1e-06
sp|Q8AII2|GAG_SIVTN Gag polyprotein OS=Simian immunodeficiency v... 52 1e-06
sp|P17282|GAG_SIVCZ Gag polyprotein OS=Simian immunodeficiency v... 52 1e-06
sp|Q1A249|POL_SIVEK Gag-Pol polyprotein OS=Simian immunodeficien... 52 1e-06
sp|Q9IDV9|POL_HV1YB Gag-Pol polyprotein OS=Human immunodeficienc... 52 1e-06
sp|Q1A250|GAG_SIVEK Gag polyprotein OS=Simian immunodeficiency v... 52 1e-06
sp|Q9IDV8|GAG_HV1YB Gag polyprotein OS=Human immunodeficiency vi... 52 1e-06
sp|Q8WW36|ZCH13_HUMAN Zinc finger CCHC domain-containing protein... 52 2e-06
sp|P27484|GRP2_NICSY Glycine-rich protein 2 OS=Nicotiana sylvest... 52 2e-06
sp|Q79666|POL_HV1MV Gag-Pol polyprotein OS=Human immunodeficienc... 51 2e-06
sp|Q79665|GAG_HV1MV Gag polyprotein OS=Human immunodeficiency vi... 51 2e-06
sp|Q82851|POL_JEMBR Gag-Pol polyprotein OS=Jembrana disease viru... 51 3e-06
sp|P35955|GAG_VILVK Gag polyprotein OS=Maedi visna virus (strain... 51 3e-06
sp|P23425|GAG_VILV2 Gag polyprotein OS=Maedi visna virus (strain... 51 3e-06
sp|P23424|GAG_VILV1 Gag polyprotein OS=Maedi visna virus (strain... 51 3e-06
sp|P03352|GAG_VILV Gag polyprotein OS=Maedi visna virus (strain ... 51 3e-06
sp|Q82850|GAG_JEMBR Gag polyprotein OS=Jembrana disease virus GN... 51 3e-06
sp|O91080|POL_HV1YF Gag-Pol polyprotein OS=Human immunodeficienc... 50 4e-06
sp|P05960|POL_HV1C4 Gag-Pol polyprotein (Fragment) OS=Human immu... 50 4e-06
sp|O91079|GAG_HV1YF Gag polyprotein OS=Human immunodeficiency vi... 50 4e-06
>sp|P62634|CNBP_RAT Cellular nucleic acid-binding protein OS=Rattus
norvegicus GN=Cnbp PE=2 SV=1
Length = 177
Score = 56.2 bits (134), Expect = 7e-08
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2
Query: 80 CYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
CYNCG GH ARDC D + KCY CG+ GHI++DC
Sbjct: 98 CYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDC 132
Score = 50.8 bits (120), Expect = 3e-06
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +2
Query: 80 CYNCGHDGHWARDCKAGDWKNK--CYRCGQRGHIERDC 187
CYNCG GH A+DCK + + CY CG+ GH+ RDC
Sbjct: 74 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 48.1 bits (113), Expect = 2e-05
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 80 CYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
CY CG GH A+DC + + CY CG+ GHI +DC
Sbjct: 54 CYRCGESGHLAKDCDLQE--DACYNCGRGGHIAKDC 87
Score = 47.4 bits (111), Expect = 3e-05
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 26/65 (40%)
Frame = +2
Query: 71 TGRCYNCGHDGHWARDCKAGDWKNK--------------------------CYRCGQRGH 172
+ C+ CG GHWAR+C G + + CYRCG+ GH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 173 IERDC 187
+ +DC
Sbjct: 63 LAKDC 67
Score = 46.6 bits (109), Expect = 6e-05
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 77 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
+CY+CG GH +DC K KCYRCG+ GH+ +C
Sbjct: 118 KCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 150
Score = 46.2 bits (108), Expect = 7e-05
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2
Query: 77 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
+CY CG GH A +C N CYRCG+ GH+ R+C
Sbjct: 136 KCYRCGETGHVAINCSKTSEVN-CYRCGESGHLAREC 171
>sp|Q5R5R5|CNBP_PONAB Cellular nucleic acid-binding protein OS=Pongo
abelii GN=CNBP PE=2 SV=1
Length = 177
Score = 56.2 bits (134), Expect = 7e-08
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2
Query: 80 CYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
CYNCG GH ARDC D + KCY CG+ GHI++DC
Sbjct: 98 CYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDC 132
Score = 50.8 bits (120), Expect = 3e-06
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +2
Query: 80 CYNCGHDGHWARDCKAGDWKNK--CYRCGQRGHIERDC 187
CYNCG GH A+DCK + + CY CG+ GH+ RDC
Sbjct: 74 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 48.1 bits (113), Expect = 2e-05
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 80 CYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
CY CG GH A+DC + + CY CG+ GHI +DC
Sbjct: 54 CYRCGESGHLAKDCDLQE--DACYNCGRGGHIAKDC 87
Score = 47.4 bits (111), Expect = 3e-05
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 26/65 (40%)
Frame = +2
Query: 71 TGRCYNCGHDGHWARDCKAGDWKNK--------------------------CYRCGQRGH 172
+ C+ CG GHWAR+C G + + CYRCG+ GH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 173 IERDC 187
+ +DC
Sbjct: 63 LAKDC 67
Score = 46.6 bits (109), Expect = 6e-05
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 77 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
+CY+CG GH +DC K KCYRCG+ GH+ +C
Sbjct: 118 KCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 150
Score = 46.2 bits (108), Expect = 7e-05
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2
Query: 77 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
+CY CG GH A +C N CYRCG+ GH+ R+C
Sbjct: 136 KCYRCGETGHVAINCSKTSEVN-CYRCGESGHLAREC 171
>sp|P53996|CNBP_MOUSE Cellular nucleic acid-binding protein OS=Mus
musculus GN=Cnbp PE=2 SV=2
Length = 178
Score = 56.2 bits (134), Expect = 7e-08
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2
Query: 80 CYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
CYNCG GH ARDC D + KCY CG+ GHI++DC
Sbjct: 99 CYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDC 133
Score = 50.8 bits (120), Expect = 3e-06
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +2
Query: 80 CYNCGHDGHWARDCKAGDWKNK--CYRCGQRGHIERDC 187
CYNCG GH A+DCK + + CY CG+ GH+ RDC
Sbjct: 75 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 112
Score = 47.4 bits (111), Expect = 3e-05
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 26/65 (40%)
Frame = +2
Query: 71 TGRCYNCGHDGHWARDCKAGDWKNK--------------------------CYRCGQRGH 172
+ C+ CG GHWAR+C G + + CYRCG+ GH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 173 IERDC 187
+ +DC
Sbjct: 63 LAKDC 67
Score = 46.6 bits (109), Expect = 6e-05
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 77 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
+CY+CG GH +DC K KCYRCG+ GH+ +C
Sbjct: 119 KCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 151
Score = 46.2 bits (108), Expect = 7e-05
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2
Query: 77 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
+CY CG GH A +C N CYRCG+ GH+ R+C
Sbjct: 137 KCYRCGETGHVAINCSKTSEVN-CYRCGESGHLAREC 172
>sp|P62633|CNBP_HUMAN Cellular nucleic acid-binding protein OS=Homo
sapiens GN=CNBP PE=1 SV=1
Length = 177
Score = 56.2 bits (134), Expect = 7e-08
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2
Query: 80 CYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
CYNCG GH ARDC D + KCY CG+ GHI++DC
Sbjct: 98 CYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDC 132
Score = 50.8 bits (120), Expect = 3e-06
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +2
Query: 80 CYNCGHDGHWARDCKAGDWKNK--CYRCGQRGHIERDC 187
CYNCG GH A+DCK + + CY CG+ GH+ RDC
Sbjct: 74 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 111
Score = 48.1 bits (113), Expect = 2e-05
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 80 CYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
CY CG GH A+DC + + CY CG+ GHI +DC
Sbjct: 54 CYRCGESGHLAKDCDLQE--DACYNCGRGGHIAKDC 87
Score = 47.4 bits (111), Expect = 3e-05
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 26/65 (40%)
Frame = +2
Query: 71 TGRCYNCGHDGHWARDCKAGDWKNK--------------------------CYRCGQRGH 172
+ C+ CG GHWAR+C G + + CYRCG+ GH
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGH 62
Query: 173 IERDC 187
+ +DC
Sbjct: 63 LAKDC 67
Score = 46.6 bits (109), Expect = 6e-05
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 77 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
+CY+CG GH +DC K KCYRCG+ GH+ +C
Sbjct: 118 KCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 150
Score = 46.2 bits (108), Expect = 7e-05
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2
Query: 77 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
+CY CG GH A +C N CYRCG+ GH+ R+C
Sbjct: 136 KCYRCGETGHVAINCSKTSEVN-CYRCGESGHLAREC 171
>sp|O42395|CNBP_CHICK Cellular nucleic acid-binding protein
OS=Gallus gallus GN=CNBP PE=2 SV=1
Length = 172
Score = 56.2 bits (134), Expect = 7e-08
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2
Query: 80 CYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
CYNCG GH ARDC D + KCY CG+ GHI++DC
Sbjct: 93 CYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDC 127
Score = 50.8 bits (120), Expect = 3e-06
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +2
Query: 80 CYNCGHDGHWARDCKAGDWKNK--CYRCGQRGHIERDC 187
CYNCG GH A+DCK + + CY CG+ GH+ RDC
Sbjct: 69 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 106
Score = 48.5 bits (114), Expect = 2e-05
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 20/59 (33%)
Frame = +2
Query: 71 TGRCYNCGHDGHWARDCKAGDWKNK--------------------CYRCGQRGHIERDC 187
+ C+ CG GHWAR+C G + + CYRCG+ GH+ +DC
Sbjct: 3 SNECFKCGRTGHWARECPTGIGRGRGMRSRGRAGFQFMSSSLPDICYRCGESGHLAKDC 61
Score = 46.6 bits (109), Expect = 6e-05
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 77 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
+CY+CG GH +DC K KCYRCG+ GH+ +C
Sbjct: 113 KCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 145
Score = 46.2 bits (108), Expect = 7e-05
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2
Query: 77 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
+CY CG GH A +C N CYRCG+ GH+ R+C
Sbjct: 131 KCYRCGETGHVAINCSKTSEVN-CYRCGESGHLAREC 166
>sp|Q3T0Q6|CNBP_BOVIN Cellular nucleic acid-binding protein OS=Bos
taurus GN=CNBP PE=2 SV=1
Length = 170
Score = 56.2 bits (134), Expect = 7e-08
Identities = 22/36 (61%), Positives = 26/36 (72%)
Frame = +2
Query: 80 CYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
CYNCG GH ARDC D + KCY CG+ GHI++DC
Sbjct: 91 CYNCGKPGHLARDCDHAD-EQKCYSCGEFGHIQKDC 125
Score = 50.8 bits (120), Expect = 3e-06
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Frame = +2
Query: 80 CYNCGHDGHWARDCKAGDWKNK--CYRCGQRGHIERDC 187
CYNCG GH A+DCK + + CY CG+ GH+ RDC
Sbjct: 67 CYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDC 104
Score = 50.1 bits (118), Expect = 5e-06
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 19/58 (32%)
Frame = +2
Query: 71 TGRCYNCGHDGHWARDCKAGDWKNK-------------------CYRCGQRGHIERDC 187
+ C+ CG GHWAR+C G + + CYRCG+ GH+ +DC
Sbjct: 3 SNECFKCGRSGHWARECPTGGGRGRGMRSRGRGFQFVSSSLPDICYRCGESGHLAKDC 60
Score = 48.1 bits (113), Expect = 2e-05
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 80 CYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
CY CG GH A+DC + + CY CG+ GHI +DC
Sbjct: 47 CYRCGESGHLAKDCDLQE--DACYNCGRGGHIAKDC 80
Score = 46.6 bits (109), Expect = 6e-05
Identities = 18/37 (48%), Positives = 24/37 (64%)
Frame = +2
Query: 77 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
+CY+CG GH +DC K KCYRCG+ GH+ +C
Sbjct: 111 KCYSCGEFGHIQKDCT----KVKCYRCGETGHVAINC 143
Score = 46.2 bits (108), Expect = 7e-05
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2
Query: 77 RCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
+CY CG GH A +C N CYRCG+ GH+ R+C
Sbjct: 129 KCYRCGETGHVAINCSKTSEVN-CYRCGESGHLAREC 164
>sp|Q77373|POL_HV1AN Gag-Pol polyprotein OS=Human immunodeficiency
virus type 1 (isolate ANT70 group O) GN=gag-pol PE=3
SV=3
Length = 1435
Score = 54.7 bits (130), Expect = 2e-07
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Frame = +2
Query: 44 YVGRGPTP---GTGRCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
++ RG P GT +C+NCG +GH AR+C+A K C++CGQ GH +DC
Sbjct: 381 FMQRGQNPIRKGTIKCFNCGKEGHIARNCRA-PRKKGCWKCGQEGHQMKDC 430
>sp|Q77372|GAG_HV1AN Gag polyprotein OS=Human immunodeficiency virus
type 1 (isolate ANT70 group O) GN=gag PE=3 SV=3
Length = 498
Score = 54.7 bits (130), Expect = 2e-07
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Frame = +2
Query: 44 YVGRGPTP---GTGRCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
++ RG P GT +C+NCG +GH AR+C+A K C++CGQ GH +DC
Sbjct: 381 FMQRGQNPIRKGTIKCFNCGKEGHIARNCRA-PRKKGCWKCGQEGHQMKDC 430
Score = 29.3 bits (64), Expect = 9.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 80 CYNCGHDGHWARDCKAGDWKN 142
C+ CG +GH +DC+ G N
Sbjct: 417 CWKCGQEGHQMKDCRNGKQAN 437
>sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP OS=Leishmania major
GN=HEXBP PE=4 SV=1
Length = 271
Score = 53.1 bits (126), Expect = 6e-07
Identities = 23/54 (42%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Frame = +2
Query: 41 EYVGRGPTPGTGRCYNCGHDGHWARDCKAGDWK-----NKCYRCGQRGHIERDC 187
E V R T + C NCG +GH+AR+C D K C+RCG+ GH+ R+C
Sbjct: 5 EDVKRPRTESSTSCRNCGKEGHYARECPEADSKGDERSTTCFRCGEEGHMSREC 58
Score = 51.6 bits (122), Expect = 2e-06
Identities = 26/63 (41%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Frame = +2
Query: 17 PRGAGGVREYVGRGPTPGTGRCYNCGHDGHWARDCK------AGDWKNKCYRCGQRGHIE 178
P G GG Y G G CY CG GH +RDC +G KCY+CG+ GH+
Sbjct: 156 PNGQGG---YSGAGDRT----CYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMS 208
Query: 179 RDC 187
R+C
Sbjct: 209 REC 211
Score = 51.2 bits (121), Expect = 2e-06
Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Frame = +2
Query: 53 RGPTPGTGRCYNCGHDGHWARDC----KAGDWKN-KCYRCGQRGHIERDC 187
R G C+ CG GH +RDC K G K +CY+CGQ GH+ RDC
Sbjct: 63 RSGAAGAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDC 112
Score = 51.2 bits (121), Expect = 2e-06
Identities = 27/66 (40%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Frame = +2
Query: 8 KRGPRGAGGVREYVGRGPTPGTGRCYNCGHDGHWARDCK------AGDWKNKCYRCGQRG 169
KRG GA +G G CY CG GH +RDC +G CY+CG G
Sbjct: 126 KRGRSGA--------QGGYSGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKCGDAG 177
Query: 170 HIERDC 187
HI RDC
Sbjct: 178 HISRDC 183
Score = 48.1 bits (113), Expect = 2e-05
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 10/60 (16%)
Frame = +2
Query: 38 REYVGRGPT-PGTGRCYNCGHDGHWARDC---------KAGDWKNKCYRCGQRGHIERDC 187
RE G T G CY CG GH +R+C G CY+CG+ GHI RDC
Sbjct: 209 RECPSAGSTGSGDRACYKCGKPGHISRECPEAGGSYGGSRGGGDRTCYKCGEAGHISRDC 268
Score = 44.7 bits (104), Expect = 2e-04
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 24/65 (36%)
Frame = +2
Query: 65 PGTGR---CYNCGHDGHWARDCKAGDWKNK---------------------CYRCGQRGH 172
PG + CY CG +GH +RDC + ++ CY+CG GH
Sbjct: 91 PGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYSGDRTCYKCGDAGH 150
Query: 173 IERDC 187
I RDC
Sbjct: 151 ISRDC 155
>sp|Q8AII1|POL_SIVTN Gag-Pol polyprotein OS=Simian immunodeficiency
virus (isolate TAN1) GN=gag-pol PE=3 SV=4
Length = 1462
Score = 52.4 bits (124), Expect = 1e-06
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Frame = +2
Query: 26 AGGVREYVGRGPTP---GTGRCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERDC 187
AGGV G P G +C+NCG GH AR+C+A K C+RCGQ GH +DC
Sbjct: 398 AGGVNMLQGGKRPPLKKGQLQCFNCGKVGHTARNCRA-PRKKGCWRCGQEGHQMKDC 453
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914625|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_B03.
(475 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A7Q413|A7Q413_VITVI Chromosome chr13 scaffold_48, whole genom... 130 4e-29
tr|B6T453|B6T453_MAIZE Splicing factor, arginine/serine-rich 6 O... 129 9e-29
tr|B6SRP6|B6SRP6_MAIZE Splicing factor, arginine/serine-rich 7 O... 128 1e-28
tr|Q0DL70|Q0DL70_ORYSJ Os05g0120100 protein OS=Oryza sativa subs... 128 2e-28
tr|A2XZS4|A2XZS4_ORYSI Putative uncharacterized protein OS=Oryza... 128 2e-28
tr|B4FEY3|B4FEY3_MAIZE Putative uncharacterized protein OS=Zea m... 127 4e-28
tr|Q5ZCD9|Q5ZCD9_ORYSJ cDNA clone:006-311-F07, full insert seque... 126 5e-28
tr|B6TAA2|B6TAA2_MAIZE Splicing factor, arginine/serine-rich 6 O... 126 5e-28
tr|A6MZ96|A6MZ96_ORYSI Splicing factor (Fragment) OS=Oryza sativ... 126 5e-28
tr|A2WKV5|A2WKV5_ORYSI Putative uncharacterized protein OS=Oryza... 126 5e-28
tr|A7PSV4|A7PSV4_VITVI Chromosome chr8 scaffold_29, whole genome... 126 6e-28
tr|A5BRP3|A5BRP3_VITVI Putative uncharacterized protein OS=Vitis... 126 6e-28
tr|A9NYX0|A9NYX0_PICSI Putative uncharacterized protein OS=Picea... 125 8e-28
tr|A9NWL8|A9NWL8_PICSI Putative uncharacterized protein OS=Picea... 125 8e-28
tr|Q8GZZ4|Q8GZZ4_ORYSJ Putative uncharacterized protein OSJNBa00... 125 1e-27
tr|Q10N19|Q10N19_ORYSJ Os03g0285900 protein OS=Oryza sativa subs... 125 1e-27
tr|B8ALJ7|B8ALJ7_ORYSI Putative uncharacterized protein OS=Oryza... 125 1e-27
tr|A3AGS9|A3AGS9_ORYSJ Putative uncharacterized protein OS=Oryza... 125 1e-27
tr|Q2QKC1|Q2QKC1_WHEAT Alternative splicing regulator OS=Triticu... 125 1e-27
tr|A9PGS4|A9PGS4_POPTR Putative uncharacterized protein OS=Popul... 118 2e-25
tr|Q9ZUT2|Q9ZUT2_ARATH Putative uncharacterized protein At2g3734... 107 2e-22
tr|Q9FYA7|Q9FYA7_ARATH Splicing factor RSZ33 OS=Arabidopsis thal... 107 2e-22
tr|Q8VYA5|Q8VYA5_ARATH Putative uncharacterized protein At2g3734... 107 2e-22
tr|Q67Y02|Q67Y02_ARATH Putative uncharacterized protein At2g3734... 107 2e-22
tr|Q3EBL3|Q3EBL3_ARATH Uncharacterized protein At2g37340.2 OS=Ar... 107 2e-22
tr|B4FRX1|B4FRX1_MAIZE Putative uncharacterized protein OS=Zea m... 107 2e-22
tr|B7E4Z9|B7E4Z9_ORYSJ cDNA clone:001-011-D02, full insert seque... 107 3e-22
tr|B6TB14|B6TB14_MAIZE Putative uncharacterized protein OS=Zea m... 107 3e-22
tr|Q9FYB7|Q9FYB7_ARATH Splicing factor-like protein OS=Arabidops... 104 2e-21
tr|Q8LPN6|Q8LPN6_ARATH AT3g53500/F4P12_200 OS=Arabidopsis thalia... 104 2e-21
>tr|A7Q413|A7Q413_VITVI Chromosome chr13 scaffold_48, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00029498001
PE=4 SV=1
Length = 288
Score = 130 bits (326), Expect = 4e-29
Identities = 52/62 (83%), Positives = 57/62 (91%)
Frame = +2
Query: 2 FAKRGPRGAGGVREYVGRGPTPGTGRCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIER 181
FAK GPRG GG REY+GRGP PG+GRC+NCG DGHWARDCKAGDWKNKCYRCG+RGHIER
Sbjct: 78 FAKGGPRGPGGSREYLGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIER 137
Query: 182 DC 187
+C
Sbjct: 138 NC 139
>tr|B6T453|B6T453_MAIZE Splicing factor, arginine/serine-rich 6
OS=Zea mays PE=2 SV=1
Length = 353
Score = 129 bits (323), Expect = 9e-29
Identities = 52/62 (83%), Positives = 57/62 (91%)
Frame = +2
Query: 2 FAKRGPRGAGGVREYVGRGPTPGTGRCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIER 181
FAK PRG+GG REY+GRGP PGTGRC+NCG DGHWARDCKAGDWKNKCYRCG+RGHIER
Sbjct: 78 FAKGVPRGSGGSREYMGRGPPPGTGRCFNCGVDGHWARDCKAGDWKNKCYRCGERGHIER 137
Query: 182 DC 187
+C
Sbjct: 138 NC 139
>tr|B6SRP6|B6SRP6_MAIZE Splicing factor, arginine/serine-rich 7
OS=Zea mays PE=2 SV=1
Length = 333
Score = 128 bits (322), Expect = 1e-28
Identities = 52/62 (83%), Positives = 56/62 (90%)
Frame = +2
Query: 2 FAKRGPRGAGGVREYVGRGPTPGTGRCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIER 181
FAK PRG GG REY+GRGP PGTGRC+NCG DGHWARDCKAGDWKNKCYRCG+RGHIER
Sbjct: 78 FAKGVPRGPGGSREYMGRGPPPGTGRCFNCGMDGHWARDCKAGDWKNKCYRCGERGHIER 137
Query: 182 DC 187
+C
Sbjct: 138 NC 139
>tr|Q0DL70|Q0DL70_ORYSJ Os05g0120100 protein OS=Oryza sativa subsp.
japonica GN=Os05g0120100 PE=4 SV=1
Length = 323
Score = 128 bits (321), Expect = 2e-28
Identities = 52/62 (83%), Positives = 56/62 (90%)
Frame = +2
Query: 2 FAKRGPRGAGGVREYVGRGPTPGTGRCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIER 181
FAK PRG GG REY+GRGP PGTGRC+NCG DGHWARDCKAGDWKNKCYRCG+RGHIER
Sbjct: 78 FAKGVPRGPGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIER 137
Query: 182 DC 187
+C
Sbjct: 138 NC 139
>tr|A2XZS4|A2XZS4_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_18237 PE=4 SV=1
Length = 331
Score = 128 bits (321), Expect = 2e-28
Identities = 52/62 (83%), Positives = 56/62 (90%)
Frame = +2
Query: 2 FAKRGPRGAGGVREYVGRGPTPGTGRCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIER 181
FAK PRG GG REY+GRGP PGTGRC+NCG DGHWARDCKAGDWKNKCYRCG+RGHIER
Sbjct: 86 FAKGVPRGPGGSREYMGRGPPPGTGRCFNCGIDGHWARDCKAGDWKNKCYRCGERGHIER 145
Query: 182 DC 187
+C
Sbjct: 146 NC 147
>tr|B4FEY3|B4FEY3_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 314
Score = 127 bits (318), Expect = 4e-28
Identities = 51/62 (82%), Positives = 56/62 (90%)
Frame = +2
Query: 2 FAKRGPRGAGGVREYVGRGPTPGTGRCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIER 181
FAK PRG+GG REY+GRGP PGTGRC+NCG DGHWARDCKAGDWKNKCYRCG+ GHIER
Sbjct: 78 FAKGVPRGSGGSREYMGRGPPPGTGRCFNCGMDGHWARDCKAGDWKNKCYRCGESGHIER 137
Query: 182 DC 187
+C
Sbjct: 138 NC 139
>tr|Q5ZCD9|Q5ZCD9_ORYSJ cDNA clone:006-311-F07, full insert sequence
OS=Oryza sativa subsp. japonica GN=P0011G08.21 PE=2 SV=1
Length = 324
Score = 126 bits (317), Expect = 5e-28
Identities = 51/62 (82%), Positives = 55/62 (88%)
Frame = +2
Query: 2 FAKRGPRGAGGVREYVGRGPTPGTGRCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIER 181
FAK PRG GG REY+GRGP PG+GRC+NCG DGHWARDCKAGDWKN+CYRCG RGHIER
Sbjct: 85 FAKGVPRGPGGSREYMGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNRCYRCGDRGHIER 144
Query: 182 DC 187
DC
Sbjct: 145 DC 146
>tr|B6TAA2|B6TAA2_MAIZE Splicing factor, arginine/serine-rich 6
OS=Zea mays PE=2 SV=1
Length = 353
Score = 126 bits (317), Expect = 5e-28
Identities = 51/61 (83%), Positives = 56/61 (91%)
Frame = +2
Query: 5 AKRGPRGAGGVREYVGRGPTPGTGRCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIERD 184
AK PRG+GG REY+GRGP PGTGRC+NCG DGHWARDCKAGDWKNKCYRCG+RGHIER+
Sbjct: 79 AKGVPRGSGGSREYMGRGPPPGTGRCFNCGVDGHWARDCKAGDWKNKCYRCGERGHIERN 138
Query: 185 C 187
C
Sbjct: 139 C 139
>tr|A6MZ96|A6MZ96_ORYSI Splicing factor (Fragment) OS=Oryza sativa
subsp. indica PE=2 SV=1
Length = 209
Score = 126 bits (317), Expect = 5e-28
Identities = 51/62 (82%), Positives = 55/62 (88%)
Frame = +2
Query: 2 FAKRGPRGAGGVREYVGRGPTPGTGRCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIER 181
FAK PRG GG REY+GRGP PG+GRC+NCG DGHWARDCKAGDWKN+CYRCG RGHIER
Sbjct: 85 FAKGVPRGPGGSREYMGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNRCYRCGDRGHIER 144
Query: 182 DC 187
DC
Sbjct: 145 DC 146
>tr|A2WKV5|A2WKV5_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_00466 PE=4 SV=1
Length = 324
Score = 126 bits (317), Expect = 5e-28
Identities = 51/62 (82%), Positives = 55/62 (88%)
Frame = +2
Query: 2 FAKRGPRGAGGVREYVGRGPTPGTGRCYNCGHDGHWARDCKAGDWKNKCYRCGQRGHIER 181
FAK PRG GG REY+GRGP PG+GRC+NCG DGHWARDCKAGDWKN+CYRCG RGHIER
Sbjct: 85 FAKGVPRGPGGSREYMGRGPPPGSGRCFNCGIDGHWARDCKAGDWKNRCYRCGDRGHIER 144
Query: 182 DC 187
DC
Sbjct: 145 DC 146
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