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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914632
Clone id YMU001_000061_B10
Library
Length 514
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000061_B10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTGCAAGGGACGAGCCAGCGGTTGTGATGGACTATGGCTTACCGCTGGGCGTTGGGAGAT
GTTTTAGATGGGTGAAATGGGTAGGGTTGTGAAAGAAAGAAAGTAGCTTCCAAGTCACAT
CATGGGCATTGAGTTATCTGGCGGCAGACTTTCTGGGCAGAGAGCATTCTTGTAATCTGA
ACGCCGATGCTTCAGCAACTTGCATTGTGGACATTGGGTTATCTCATCGCGACTACATTG
CACAGAAAACATGTTTATAATTGCAGTCTTGATGCTTTGAGGTATGTAGATCTAAGCGGC
CAGCCCTGCTTCGGTGCCAAGGCATTCAGAGAGCATTCTAAAATCCTCATACAGATCCAA
CATTGAAGCAATTCGGCTCACTGTTCATGTACATAGAGGTGGTGTTTTGAGTGCCTAATG
TTGCAGATGATTCAAAACAGATAACGCAGCCCTTATGATAAGATGGTGCCCACAGAACAG
ACTACCTCAGTGGCTGCAATATGCAATCTTTGTC
■■Homology search results ■■ -
sp_hit_id Q3E7D0
Definition sp|Q3E7D0|NAT12_ARATH Nucleobase-ascorbate transporter 12 OS=Arabidopsis thaliana
Align length 29
Score (bit) 44.7
E-value 0.0003
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914632|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_B10.
         (514 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q3E7D0|NAT12_ARATH Nucleobase-ascorbate transporter 12 OS=Ara...    45   3e-04
sp|P42346|FRAP_RAT FKBP12-rapamycin complex-associated protein O...    31   3.9  
sp|Q9JLN9|FRAP_MOUSE FKBP12-rapamycin complex-associated protein...    30   5.1  
sp|P42345|FRAP_HUMAN FKBP12-rapamycin complex-associated protein...    30   5.1  
sp|Q09701|AKR1_SCHPO Palmitoyltransferase akr1 OS=Schizosaccharo...    30   8.7  

>sp|Q3E7D0|NAT12_ARATH Nucleobase-ascorbate transporter 12
           OS=Arabidopsis thaliana GN=NAT12 PE=2 SV=3
          Length = 709

 Score = 44.7 bits (104), Expect = 3e-04
 Identities = 19/29 (65%), Positives = 21/29 (72%)
 Frame = +3

Query: 3   ARDEPAVVMDYGLPLGVGRCFRWVKWVGL 89
           A  EPA+  DY LP  VGR FRWVKWVG+
Sbjct: 681 ATREPALAKDYELPFRVGRFFRWVKWVGI 709


>sp|P42346|FRAP_RAT FKBP12-rapamycin complex-associated protein
           OS=Rattus norvegicus GN=Frap1 PE=1 SV=1
          Length = 2549

 Score = 30.8 bits (68), Expect = 3.9
 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 8/36 (22%)
 Frame = +1

Query: 154 WAESILVI*TPMLQ--------QLALWTLGYLIATT 237
           W + + VI   MLQ        Q+ALWTLG L+A+T
Sbjct: 816 WVDELFVIIMDMLQDSSLLAKRQVALWTLGQLVAST 851


>sp|Q9JLN9|FRAP_MOUSE FKBP12-rapamycin complex-associated protein
           OS=Mus musculus GN=Frap1 PE=1 SV=1
          Length = 2549

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 8/36 (22%)
 Frame = +1

Query: 154 WAESILVI*TPMLQ--------QLALWTLGYLIATT 237
           W + + +I   MLQ        Q+ALWTLG L+A+T
Sbjct: 816 WVDELFIIIMDMLQDSSLLAKRQVALWTLGQLVAST 851


>sp|P42345|FRAP_HUMAN FKBP12-rapamycin complex-associated protein
           OS=Homo sapiens GN=FRAP1 PE=1 SV=1
          Length = 2549

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 8/36 (22%)
 Frame = +1

Query: 154 WAESILVI*TPMLQ--------QLALWTLGYLIATT 237
           W + + +I   MLQ        Q+ALWTLG L+A+T
Sbjct: 816 WVDELFIIIMDMLQDSSLLAKRQVALWTLGQLVAST 851


>sp|Q09701|AKR1_SCHPO Palmitoyltransferase akr1
           OS=Schizosaccharomyces pombe GN=akr1 PE=2 SV=1
          Length = 642

 Score = 29.6 bits (65), Expect = 8.7
 Identities = 16/33 (48%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -1

Query: 445 VICFESSATLGTQNTTSMYMN-SEPNCFNVGSV 350
           V CF S A LG+QN+TS+  N S  N ++ GS+
Sbjct: 585 VRCFPSRAELGSQNSTSLSRNLSTVNPYDEGSI 617
tr_hit_id A2Q219
Definition tr|A2Q219|A2Q219_MEDTR Xanthine/uracil/vitamin C permease (Fragment) OS=Medicago truncatula
Align length 28
Score (bit) 52.0
E-value 2.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914632|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_B10.
         (514 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A2Q219|A2Q219_MEDTR Xanthine/uracil/vitamin C permease (Fragm...    52   2e-05
tr|A9SZ42|A9SZ42_PHYPA Predicted protein OS=Physcomitrella paten...    51   4e-05
tr|A7PQI8|A7PQI8_VITVI Chromosome chr6 scaffold_25, whole genome...    49   1e-04
tr|A5C6X4|A5C6X4_VITVI Putative uncharacterized protein OS=Vitis...    49   1e-04
tr|A9RF10|A9RF10_PHYPA Predicted protein OS=Physcomitrella paten...    47   5e-04
tr|A9S4J9|A9S4J9_PHYPA Predicted protein OS=Physcomitrella paten...    44   0.006
tr|Q5N911|Q5N911_ORYSJ cDNA clone:J013164P20, full insert sequen...    40   0.087
tr|B8ACH2|B8ACH2_ORYSI Putative uncharacterized protein OS=Oryza...    40   0.087
tr|B7ZWZ5|B7ZWZ5_MAIZE Putative uncharacterized protein OS=Zea m...    35   2.8  

>tr|A2Q219|A2Q219_MEDTR Xanthine/uracil/vitamin C permease
           (Fragment) OS=Medicago truncatula
           GN=MtrDRAFT_AC149206g30v2 PE=4 SV=1
          Length = 360

 Score = 52.0 bits (123), Expect = 2e-05
 Identities = 20/28 (71%), Positives = 24/28 (85%)
 Frame = +3

Query: 3   ARDEPAVVMDYGLPLGVGRCFRWVKWVG 86
           AR++P +V +YGLP  VGRCFRWVKWVG
Sbjct: 332 AREDPFIVSEYGLPARVGRCFRWVKWVG 359


>tr|A9SZ42|A9SZ42_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_234556 PE=4 SV=1
          Length = 668

 Score = 50.8 bits (120), Expect = 4e-05
 Identities = 21/29 (72%), Positives = 24/29 (82%)
 Frame = +3

Query: 3   ARDEPAVVMDYGLPLGVGRCFRWVKWVGL 89
           AR+EPAVV DYGLP G+ R F WV+WVGL
Sbjct: 640 ARNEPAVVKDYGLPFGLSRYFSWVRWVGL 668


>tr|A7PQI8|A7PQI8_VITVI Chromosome chr6 scaffold_25, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00022084001
           PE=4 SV=1
          Length = 671

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 22/29 (75%), Positives = 22/29 (75%)
 Frame = +3

Query: 3   ARDEPAVVMDYGLPLGVGRCFRWVKWVGL 89
           AR EPAV  DY LP  VGR FRWVKWVGL
Sbjct: 643 ARREPAVAKDYELPFRVGRVFRWVKWVGL 671


>tr|A5C6X4|A5C6X4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_033683 PE=4 SV=1
          Length = 251

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 22/29 (75%), Positives = 22/29 (75%)
 Frame = +3

Query: 3   ARDEPAVVMDYGLPLGVGRCFRWVKWVGL 89
           AR EPAV  DY LP  VGR FRWVKWVGL
Sbjct: 223 ARREPAVAKDYELPFRVGRVFRWVKWVGL 251


>tr|A9RF10|A9RF10_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_112714 PE=4 SV=1
          Length = 540

 Score = 47.0 bits (110), Expect = 5e-04
 Identities = 19/29 (65%), Positives = 23/29 (79%)
 Frame = +3

Query: 3   ARDEPAVVMDYGLPLGVGRCFRWVKWVGL 89
           AR+EPAVV DYGL  G+ + F WV+WVGL
Sbjct: 512 ARNEPAVVKDYGLAFGLSKYFNWVRWVGL 540


>tr|A9S4J9|A9S4J9_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_124037 PE=4 SV=1
          Length = 572

 Score = 43.5 bits (101), Expect = 0.006
 Identities = 16/29 (55%), Positives = 22/29 (75%)
 Frame = +3

Query: 3   ARDEPAVVMDYGLPLGVGRCFRWVKWVGL 89
           AR++P VV +YGLP G+ R F W +W+GL
Sbjct: 544 ARNDPTVVKEYGLPFGLSRYFMWCRWMGL 572


>tr|Q5N911|Q5N911_ORYSJ cDNA clone:J013164P20, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0683F02.12 PE=2 SV=1
          Length = 253

 Score = 39.7 bits (91), Expect = 0.087
 Identities = 18/29 (62%), Positives = 20/29 (68%)
 Frame = +3

Query: 3   ARDEPAVVMDYGLPLGVGRCFRWVKWVGL 89
           AR E AV+ DY LP  +G  FRWVK VGL
Sbjct: 225 ARRESAVMKDYELPFKIGHAFRWVKCVGL 253


>tr|B8ACH2|B8ACH2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04495 PE=4 SV=1
          Length = 680

 Score = 39.7 bits (91), Expect = 0.087
 Identities = 18/29 (62%), Positives = 20/29 (68%)
 Frame = +3

Query: 3   ARDEPAVVMDYGLPLGVGRCFRWVKWVGL 89
           AR E AV+ DY LP  +G  FRWVK VGL
Sbjct: 652 ARRESAVMKDYELPFKIGHAFRWVKCVGL 680


>tr|B7ZWZ5|B7ZWZ5_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 682

 Score = 34.7 bits (78), Expect = 2.8
 Identities = 16/29 (55%), Positives = 18/29 (62%)
 Frame = +3

Query: 3   ARDEPAVVMDYGLPLGVGRCFRWVKWVGL 89
           A  E   + DY LP  +GR FRWVK VGL
Sbjct: 654 AMRESTFMKDYELPFKIGRPFRWVKCVGL 682