BP914634
Clone id YMU001_000061_B12
Library
Length 568
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000061_B12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CACACACACACACACAATAAATGGAGGGTGACAAACCGGAATTGGGAGCTACACAGATTG
TGGTTGAGGCACTTACTAGATCAATATCATACATATATGGCTTGTGGGGGCTTCCAGGTC
ATCATAATGTTAGATTGGCCCTTGTGTCATCTCGAGAGCTAGCCATGGGAGGAGACTCTA
GATGTTGATATGCACAAAGTGATAGATGCCAGCTTGGTTTCAGTTGCTTGGCTTTACTAT
CGCCAGATTACCACCATTTTAGTACTCTTTGAACACTTCATCACTTGCATTCCCACATTC
AGAGATCAACATGATAATCAGATATGATCTCACGCATTGATATAGAGTGGACATGGATGA
CTCCTTCTCAGGACTTGGGGAAGAGAGTGGCTTTTAAGCAGTTCCTTCACATTACCGAGG
ATATATTTATTTAACGGCCAAGAATATGTGGATTCGCACCAGTCGCACGGGCTTCGATAT
GCCATAGGATAGCTTCAGACCTCCTCCCATTAGCTGTTGCGGATATGCCACTATGCAAAG
TCGAGCTAGAGACAGAGGAGCACTACAT
■■Homology search results ■■ -
sp_hit_id Q68DQ2
Definition sp|Q68DQ2|CRBG3_HUMAN Beta/gamma crystallin domain-containing protein 3 OS=Homo sapiens
Align length 46
Score (bit) 32.7
E-value 1.3
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914634|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_B12.
(568 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q68DQ2|CRBG3_HUMAN Beta/gamma crystallin domain-containing pr... 33 1.3
sp|Q9NXK8|FXL12_HUMAN F-box/LRR-repeat protein 12 OS=Homo sapien... 31 3.8
sp|Q32PG9|FXL12_BOVIN F-box/LRR-repeat protein 12 OS=Bos taurus ... 31 4.9

>sp|Q68DQ2|CRBG3_HUMAN Beta/gamma crystallin domain-containing
protein 3 OS=Homo sapiens GN=CRYBG3 PE=2 SV=2
Length = 1022

Score = 32.7 bits (73), Expect = 1.3
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Frame = -3

Query: 464 DWCESTYSWPLNKYILGNVKELLKSHSLPQV--LRRSHP--CPLYI 339
DW P +ILG++K +LK S+P++ +S P CP+YI
Sbjct: 413 DWILQNRRHPQRNFILGSLKRVLKDCSIPEIELFPQSDPACCPVYI 458


>sp|Q9NXK8|FXL12_HUMAN F-box/LRR-repeat protein 12 OS=Homo sapiens
GN=FBXL12 PE=1 SV=1
Length = 326

Score = 31.2 bits (69), Expect = 3.8
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +1

Query: 217 VSVAWLYYRQITTILVLFEHFI-TCIPTFRDQH 312
+S+AWL+ +Q T+L L E + +P FRD+H
Sbjct: 136 ISMAWLHKQQDPTVLPLLECIVLDRVPAFRDEH 168


>sp|Q32PG9|FXL12_BOVIN F-box/LRR-repeat protein 12 OS=Bos taurus
GN=FBXL12 PE=2 SV=1
Length = 326

Score = 30.8 bits (68), Expect = 4.9
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = +1

Query: 217 VSVAWLYYRQITTILVLFEHFI-TCIPTFRDQH 312
+S+AWL+ Q T+L L E + +P FRD+H
Sbjct: 136 ISMAWLHKEQDPTVLPLLECIVLDRVPAFRDEH 168


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914634|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_B12.
(568 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******