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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914637
Clone id YMU001_000061_C03
Library
Length 544
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000061_C03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GCAGGTTGTGGGAGCTGTTGGGTTTCAACATAGAAGACTCCAGATGCCCAAGGACTTGAA
CCCGAATTTAGCAGCACTGATTGAATCATGCTGGGCCGGCGATCCACGGCAACGTCCAGG
CTTCACAGCAATCATGGAGTCCTTAAAGCAATTGCTAAGCGTGGACTGATTGCTCGTTAG
CCACGTAGAAGGTCTTCTCTTTCAGATTTATGTGGGGGTTGCATTCGTCTTGAAGGTTAA
CTTCTTTCAGGAGCTGCTTCTTGTCGATTTGAGAAGTTGACAACATGGGTGTTTACTCGG
CATTTGCCAATGTGCGATTTGCTGCATGAATATGATGGCCTCCATGGAATGGACACTATA
ATAGGATTTAAGGATGAAGACATGGAATTTGAGAGTTGTCATTAGGTTATTAACTAAGCA
TTGGGCAAAAGCACCATACCTATGGTATCCCAATATTGGGAGGTATGAAGGAAGATTTAG
AAGCTGCCCCTCGATCACTTCACAAAAATATGTCTTTGGGATGATAGTTGGGAGAGAGAT
GGTC
■■Homology search results ■■ -
sp_hit_id Q05609
Definition sp|Q05609|CTR1_ARATH Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana
Align length 40
Score (bit) 53.5
E-value 6.0e-07
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914637|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_C03.
         (525 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q05609|CTR1_ARATH Serine/threonine-protein kinase CTR1 OS=Ara...    54   6e-07
sp|Q55GE6|ROCO7_DICDI Probable serine/threonine-protein kinase r...    42   0.002
sp|Q6XHA5|ROC11_DICDI Probable serine/threonine-protein kinase r...    41   0.003
sp|Q54I36|KYK3_DICDI Dual specificity protein kinase dpyk3 OS=Di...    41   0.003
sp|Q6XHB2|ROCO4_DICDI Probable serine/threonine-protein kinase r...    40   0.005
sp|Q5MD89|VGFR3_DANRE Vascular endothelial growth factor recepto...    39   0.012
sp|Q91ZT1|VGFR3_RAT Vascular endothelial growth factor receptor ...    39   0.015
sp|P35917|VGFR3_MOUSE Vascular endothelial growth factor recepto...    39   0.015
sp|Q8SSS9|QKGA_DICDI Probable serine/threonine-protein kinase qk...    39   0.015
sp|Q91738|FAK1_XENLA Focal adhesion kinase 1 OS=Xenopus laevis G...    38   0.026
sp|O35346|FAK1_RAT Focal adhesion kinase 1 OS=Rattus norvegicus ...    38   0.026
sp|P34152|FAK1_MOUSE Focal adhesion kinase 1 OS=Mus musculus GN=...    38   0.026
sp|Q05397|FAK1_HUMAN Focal adhesion kinase 1 OS=Homo sapiens GN=...    38   0.026
sp|Q00944|FAK1_CHICK Focal adhesion kinase 1 OS=Gallus gallus GN...    38   0.026
sp|Q54N73|7TMK1_DICDI Seven transmembrane domain-containing tyro...    37   0.044
sp|Q64434|PTK6_MOUSE Tyrosine-protein kinase 6 OS=Mus musculus G...    37   0.058
sp|P35916|VGFR3_HUMAN Vascular endothelial growth factor recepto...    37   0.076
sp|Q95UN8|M3KSL_DROME Mitogen-activated protein kinase kinase ki...    37   0.076
sp|P30530|UFO_HUMAN Tyrosine-protein kinase receptor UFO OS=Homo...    36   0.099
sp|Q25410|MIPR_LYMST Putative molluscan insulin-related peptide(...    36   0.099
sp|Q8MVR1|GBPC_DICDI Cyclic GMP-binding protein C OS=Dictyosteli...    36   0.099
sp|Q06418|TYRO3_HUMAN Tyrosine-protein kinase receptor TYRO3 OS=...    36   0.13 
sp|Q5JJY4|P2C04_ORYSJ Protein kinase and PP2C-like domain-contai...    36   0.13 
sp|Q54TM7|DRKD_DICDI Probable serine/threonine-protein kinase dr...    36   0.13 
sp|P52583|VGFR2_COTJA Vascular endothelial growth factor recepto...    35   0.17 
sp|P55146|TYRO3_RAT Tyrosine-protein kinase receptor TYRO3 OS=Ra...    35   0.17 
sp|P55144|TYRO3_MOUSE Tyrosine-protein kinase receptor TYRO3 OS=...    35   0.17 
sp|Q54U31|SHKD_DICDI Dual specificity protein kinase shkD OS=Dic...    35   0.17 
sp|Q00993|UFO_MOUSE Tyrosine-protein kinase receptor UFO OS=Mus ...    35   0.29 
sp|Q54Y55|SHKC_DICDI Dual specificity protein kinase shkC OS=Dic...    35   0.29 

>sp|Q05609|CTR1_ARATH Serine/threonine-protein kinase CTR1
           OS=Arabidopsis thaliana GN=CTR1 PE=1 SV=1
          Length = 821

 Score = 53.5 bits (127), Expect = 6e-07
 Identities = 20/40 (50%), Positives = 31/40 (77%)
 Frame = +1

Query: 1   GFQHRRLQMPKDLNPNLAALIESCWAGDPRQRPGFTAIME 120
           GF+ +RL++P++LNP +AA+IE CW  +P +RP F  IM+
Sbjct: 764 GFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMD 803


>sp|Q55GE6|ROCO7_DICDI Probable serine/threonine-protein kinase roco7
            OS=Dictyostelium discoideum GN=roco7 PE=3 SV=1
          Length = 2615

 Score = 41.6 bits (96), Expect = 0.002
 Identities = 15/35 (42%), Positives = 24/35 (68%)
 Frame = +1

Query: 16   RLQMPKDLNPNLAALIESCWAGDPRQRPGFTAIME 120
            R  +P +  P++  LI  CW+GDP++RP F +I+E
Sbjct: 1999 RPTIPNECPPDMKQLITDCWSGDPKKRPSFNSILE 2033


>sp|Q6XHA5|ROC11_DICDI Probable serine/threonine-protein kinase roco11
            OS=Dictyostelium discoideum GN=roco11 PE=3 SV=1
          Length = 1487

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 16/35 (45%), Positives = 25/35 (71%)
 Frame = +1

Query: 16   RLQMPKDLNPNLAALIESCWAGDPRQRPGFTAIME 120
            R  +P D  P ++ LIE CW+GDP++RP F+ I++
Sbjct: 1412 RPTIPSDCPPTISNLIELCWSGDPKKRPHFSYIVK 1446


>sp|Q54I36|KYK3_DICDI Dual specificity protein kinase dpyk3
            OS=Dictyostelium discoideum GN=pkyA PE=1 SV=1
          Length = 1338

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 18/38 (47%), Positives = 23/38 (60%)
 Frame = +1

Query: 4    FQHRRLQMPKDLNPNLAALIESCWAGDPRQRPGFTAIM 117
            F++ R  +P D   +L  LI  CWA DP QRP FT I+
Sbjct: 1261 FENYRPAIPPDCPVSLRKLITKCWASDPSQRPSFTEIL 1298


>sp|Q6XHB2|ROCO4_DICDI Probable serine/threonine-protein kinase roco4
            OS=Dictyostelium discoideum GN=roco4 PE=3 SV=1
          Length = 1726

 Score = 40.4 bits (93), Expect = 0.005
 Identities = 16/35 (45%), Positives = 25/35 (71%)
 Frame = +1

Query: 16   RLQMPKDLNPNLAALIESCWAGDPRQRPGFTAIME 120
            R  +P+D  P L  +IE CW+GDP++RP F+ I++
Sbjct: 1253 RPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK 1287


>sp|Q5MD89|VGFR3_DANRE Vascular endothelial growth factor receptor 3
            OS=Danio rerio GN=flt4 PE=2 SV=1
          Length = 1357

 Score = 39.3 bits (90), Expect = 0.012
 Identities = 13/35 (37%), Positives = 25/35 (71%)
 Frame = +1

Query: 16   RLQMPKDLNPNLAALIESCWAGDPRQRPGFTAIME 120
            R++ P + +P +  ++ +CW G+PR+RP F A++E
Sbjct: 1141 RMRAPDNASPEIYGIMLACWQGEPRERPTFPALVE 1175


>sp|Q91ZT1|VGFR3_RAT Vascular endothelial growth factor receptor 3
            OS=Rattus norvegicus GN=Flt4 PE=1 SV=1
          Length = 1363

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 13/35 (37%), Positives = 25/35 (71%)
 Frame = +1

Query: 16   RLQMPKDLNPNLAALIESCWAGDPRQRPGFTAIME 120
            R++ P+   P +  +++SCW+GDP+ RP F+ ++E
Sbjct: 1133 RMRAPELATPAIRHIMQSCWSGDPKARPAFSDLVE 1167


>sp|P35917|VGFR3_MOUSE Vascular endothelial growth factor receptor 3
            OS=Mus musculus GN=Flt4 PE=1 SV=1
          Length = 1363

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 13/35 (37%), Positives = 25/35 (71%)
 Frame = +1

Query: 16   RLQMPKDLNPNLAALIESCWAGDPRQRPGFTAIME 120
            R++ P+   P +  +++SCW+GDP+ RP F+ ++E
Sbjct: 1133 RMRAPELATPAIRHIMQSCWSGDPKARPAFSDLVE 1167


>sp|Q8SSS9|QKGA_DICDI Probable serine/threonine-protein kinase qkgA
            OS=Dictyostelium discoideum GN=qkgA-1 PE=3 SV=2
          Length = 1553

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 15/38 (39%), Positives = 27/38 (71%)
 Frame = +1

Query: 7    QHRRLQMPKDLNPNLAALIESCWAGDPRQRPGFTAIME 120
            ++ R  +P D +P L+ LI+ CW+ +P++RP FT I++
Sbjct: 1489 ENLRPTLPFDCDPRLSNLIQLCWSTNPKKRPSFTFIIK 1526


>sp|Q91738|FAK1_XENLA Focal adhesion kinase 1 OS=Xenopus laevis
           GN=ptk2 PE=2 SV=2
          Length = 1068

 Score = 38.1 bits (87), Expect = 0.026
 Identities = 16/33 (48%), Positives = 21/33 (63%)
 Frame = +1

Query: 16  RLQMPKDLNPNLAALIESCWAGDPRQRPGFTAI 114
           RL MP +  P L +L+  CWA DP +RP FT +
Sbjct: 653 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTEL 685
tr_hit_id A2T3V4
Definition tr|A2T3V4|A2T3V4_MALDO Ethylene control element variant OS=Malus domestica
Align length 40
Score (bit) 61.6
E-value 2.0e-08
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914637|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_C03.
         (525 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A2T3V4|A2T3V4_MALDO Ethylene control element variant OS=Malus...    62   2e-08
tr|A2T3V3|A2T3V3_MALDO Ethylene control element variant OS=Malus...    62   2e-08
tr|A2T3V2|A2T3V2_MALDO Ethylene control element OS=Malus domesti...    62   2e-08
tr|Q8W231|Q8W231_PYRCO Putative serine/threonine-specific protei...    61   3e-08
tr|Q650V1|Q650V1_ORYSJ Putative serine/threonine-specific protei...    60   5e-08
tr|B8K1X4|B8K1X4_WHEAT Putative ethylene constitutive triple res...    60   5e-08
tr|Q93XL9|Q93XL9_ROSHC CTR1-like protein kinase OS=Rosa hybrid c...    59   1e-07
tr|A9PDU5|A9PDU5_POPTR Putative uncharacterized protein OS=Popul...    59   1e-07
tr|Q7X9G6|Q7X9G6_9MAGN Constitutive triple response 1-like prote...    58   3e-07
tr|Q7XPL1|Q7XPL1_ORYSJ Os04g0610900 protein OS=Oryza sativa subs...    56   1e-06
tr|Q01JS4|Q01JS4_ORYSA OSIGBa0152L12.10 protein OS=Oryza sativa ...    56   1e-06
tr|B3FIB3|B3FIB3_ACTDE CTR1-like protein kinase CTR2 (Fragment) ...    56   1e-06
tr|B3FIB2|B3FIB2_ACTDE CTR1-like protein kinase CTR1 (Fragment) ...    56   1e-06
tr|A7PPJ6|A7PPJ6_VITVI Chromosome chr8 scaffold_23, whole genome...    56   1e-06
tr|A5AD46|A5AD46_VITVI Putative uncharacterized protein OS=Vitis...    56   1e-06
tr|A3AXA7|A3AXA7_ORYSJ Putative uncharacterized protein OS=Oryza...    56   1e-06
tr|A2XXE3|A2XXE3_ORYSI Putative uncharacterized protein OS=Oryza...    56   1e-06
tr|A9UAN3|A9UAN3_9ROSA Putative serine/threonine-specific protei...    55   2e-06
tr|O24027|O24027_SOLLC Putative uncharacterized protein (Ethylen...    55   2e-06
tr|Q5YKK5|Q5YKK5_SOLLC CTR1-like protein kinase OS=Solanum lycop...    54   4e-06
tr|Q0WUI6|Q0WUI6_ARATH Serine/threonine-protein kinase CTR1 OS=A...    54   6e-06
tr|Q6YW44|Q6YW44_ORYSJ Putative MAP3K delta-1 protein kinase OS=...    53   1e-05
tr|Q6QD68|Q6QD68_NICBE CTR1 (Fragment) OS=Nicotiana benthamiana ...    52   1e-05
tr|B8AE88|B8AE88_ORYSI Putative uncharacterized protein OS=Oryza...    52   1e-05
tr|Q9LMS1|Q9LMS1_ARATH T10F20.16 protein OS=Arabidopsis thaliana...    52   2e-05
tr|Q9LM32|Q9LM32_ARATH T10O22.13 OS=Arabidopsis thaliana PE=4 SV=1     52   2e-05
tr|Q8LPH3|Q8LPH3_ARATH MAP kinase, putative OS=Arabidopsis thali...    52   2e-05
tr|A9U3B8|A9U3B8_PHYPA Predicted protein (Fragment) OS=Physcomit...    52   2e-05
tr|Q6H6Q5|Q6H6Q5_ORYSJ Putative CTR1-like protein kinase OS=Oryz...    52   2e-05
tr|B8AIY9|B8AIY9_ORYSI Putative uncharacterized protein OS=Oryza...    52   2e-05

>tr|A2T3V4|A2T3V4_MALDO Ethylene control element variant OS=Malus
           domestica GN=CTR1 PE=2 SV=1
          Length = 843

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 23/40 (57%), Positives = 36/40 (90%)
 Frame = +1

Query: 1   GFQHRRLQMPKDLNPNLAALIESCWAGDPRQRPGFTAIME 120
           GF+++RL++P+DLNPN+AA+IE+CWA +P +RP F +IM+
Sbjct: 782 GFKNKRLEIPRDLNPNVAAIIEACWANEPWKRPSFASIMD 821


>tr|A2T3V3|A2T3V3_MALDO Ethylene control element variant OS=Malus
           domestica GN=CTR1 PE=2 SV=1
          Length = 843

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 23/40 (57%), Positives = 36/40 (90%)
 Frame = +1

Query: 1   GFQHRRLQMPKDLNPNLAALIESCWAGDPRQRPGFTAIME 120
           GF+++RL++P+DLNPN+AA+IE+CWA +P +RP F +IM+
Sbjct: 782 GFKNKRLEIPRDLNPNVAAIIEACWANEPWKRPSFASIMD 821


>tr|A2T3V2|A2T3V2_MALDO Ethylene control element OS=Malus domestica
           GN=CTR1 PE=2 SV=1
          Length = 809

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 23/40 (57%), Positives = 36/40 (90%)
 Frame = +1

Query: 1   GFQHRRLQMPKDLNPNLAALIESCWAGDPRQRPGFTAIME 120
           GF+++RL++P+DLNPN+AA+IE+CWA +P +RP F +IM+
Sbjct: 748 GFKNKRLEIPRDLNPNVAAIIEACWANEPWKRPSFASIMD 787


>tr|Q8W231|Q8W231_PYRCO Putative serine/threonine-specific protein
           kinase (Fragment) OS=Pyrus communis GN=CTR1 PE=2 SV=1
          Length = 520

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 23/40 (57%), Positives = 35/40 (87%)
 Frame = +1

Query: 1   GFQHRRLQMPKDLNPNLAALIESCWAGDPRQRPGFTAIME 120
           GF+++RL++P+DLNPN+AA+IE+CWA +P +RP F  IM+
Sbjct: 459 GFKNKRLEIPRDLNPNVAAIIEACWANEPWKRPSFAVIMD 498


>tr|Q650V1|Q650V1_ORYSJ Putative serine/threonine-specific protein
           kinase OS=Oryza sativa subsp. japonica
           GN=OSJNBa0070E11.26 PE=4 SV=1
          Length = 760

 Score = 60.5 bits (145), Expect = 5e-08
 Identities = 26/40 (65%), Positives = 32/40 (80%)
 Frame = +1

Query: 1   GFQHRRLQMPKDLNPNLAALIESCWAGDPRQRPGFTAIME 120
           GF+ RRL +PKDLNP +AALIESCWA +P +RP F  IM+
Sbjct: 703 GFKGRRLDIPKDLNPQVAALIESCWANEPWRRPSFANIMD 742


>tr|B8K1X4|B8K1X4_WHEAT Putative ethylene constitutive triple
           response protein OS=Triticum aestivum GN=CTR1 PE=2 SV=1
          Length = 759

 Score = 60.5 bits (145), Expect = 5e-08
 Identities = 25/39 (64%), Positives = 33/39 (84%)
 Frame = +1

Query: 4   FQHRRLQMPKDLNPNLAALIESCWAGDPRQRPGFTAIME 120
           FQ+RRL +PKD  P LAAL+ESCW+ DPRQRP F++I++
Sbjct: 707 FQNRRLPIPKDTIPELAALVESCWSDDPRQRPSFSSIVD 745


>tr|Q93XL9|Q93XL9_ROSHC CTR1-like protein kinase OS=Rosa hybrid
           cultivar GN=CTR1 PE=2 SV=1
          Length = 847

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 22/40 (55%), Positives = 35/40 (87%)
 Frame = +1

Query: 1   GFQHRRLQMPKDLNPNLAALIESCWAGDPRQRPGFTAIME 120
           GF+++RL++P+DLNP +A++IE+CWA +P +RP F +IME
Sbjct: 786 GFKNKRLEIPRDLNPQVASIIEACWANEPWKRPSFASIME 825


>tr|A9PDU5|A9PDU5_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 172

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 23/40 (57%), Positives = 35/40 (87%)
 Frame = +1

Query: 1   GFQHRRLQMPKDLNPNLAALIESCWAGDPRQRPGFTAIME 120
           GF+ +RL++P+DLNP++AALIE+CWA +P +RP F +IM+
Sbjct: 111 GFKGKRLEIPRDLNPHVAALIEACWANEPWKRPSFASIMD 150


>tr|Q7X9G6|Q7X9G6_9MAGN Constitutive triple response 1-like protein
           kinase OS=Delphinium 'MagicFountains dark blue' GN=CTR1
           PE=2 SV=1
          Length = 800

 Score = 57.8 bits (138), Expect = 3e-07
 Identities = 22/40 (55%), Positives = 33/40 (82%)
 Frame = +1

Query: 1   GFQHRRLQMPKDLNPNLAALIESCWAGDPRQRPGFTAIME 120
           GF+H+RL +P  L+P++A LIE+CW+ DP +RP F++IME
Sbjct: 739 GFKHKRLPIPSSLDPDIAVLIEACWSKDPSKRPSFSSIME 778


>tr|Q7XPL1|Q7XPL1_ORYSJ Os04g0610900 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0085I10.15 PE=4 SV=2
          Length = 778

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 23/39 (58%), Positives = 32/39 (82%)
 Frame = +1

Query: 4   FQHRRLQMPKDLNPNLAALIESCWAGDPRQRPGFTAIME 120
           FQ+RRL +P++  P LAAL+ESCW  DPRQRP F++I++
Sbjct: 727 FQNRRLPIPQETVPELAALVESCWDDDPRQRPSFSSIVD 765