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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914641
Clone id YMU001_000061_C07
Library
Length 497
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000061_C07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GGAAGAGGAATGCTTGGATGCACACGATGAACCCACACTGATGTTTCAGCCAATCAGAAC
AGGGGCTCTGTAGAAATTTATGTCCAAGGGCTATACAAAGTGAGTTCGAGCTTTGCAGGN
TTTCCTTCAAATTTGTATCACTGATACTTCACATTGAGATAAAATTGCAAGGCTTACACC
CACAGGACTCCATGTATACACAAGGTAAGCTACTTCTTTTAGATGATTCCAAATAGCTCC
CAAGTATGTTTCCACAAGGAAATGTAGAACAATCAGAAAGCCAAAGGCTTTCATTAATTC
AAAATGCAGCTTCTGGGAAGCTTAATCAGCAAGAGCATACAAAATATTTTCCTGTCACCC
AGGCTCCATTTTTTGACATTGCTTGATAAGAAGCATTGTGCCTTTTTACAAGCAGAACCA
TGCAATTGAGACGTTAATTGTACGATCAATGATCTCTTTTTAAAACTGACGTACTGGGAC
TGAAAGCTGCAATCAGT
■■Homology search results ■■ -
sp_hit_id Q9EQF2
Definition sp|Q9EQF2|KELL_MOUSE Kell blood group glycoprotein homolog OS=Mus musculus
Align length 66
Score (bit) 31.2
E-value 2.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914641|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_C07.
         (497 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9EQF2|KELL_MOUSE Kell blood group glycoprotein homolog OS=Mu...    31   2.8  
sp|Q9JKT2|TR119_MOUSE Taste receptor type 2 member 119 OS=Mus mu...    30   6.1  

>sp|Q9EQF2|KELL_MOUSE Kell blood group glycoprotein homolog OS=Mus
           musculus GN=Kel PE=1 SV=1
          Length = 713

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 20/66 (30%), Positives = 24/66 (36%)
 Frame = -2

Query: 361 WVTGKYFVCSC*LSFPEAAF*INESLWLSDCSTFPCGNILGSYLESSKRSSLPCVYMESC 182
           WV     +C   L      F I  +     C T  C  +L  YL S  RS  PC    S 
Sbjct: 28  WVLLAVLLCGLLLGSSMLWFYIFRNCGPCPCETPVCMELLDHYLASGNRSVAPCTDFFSF 87

Query: 181 GCKPCN 164
            C+  N
Sbjct: 88  ACEKAN 93


>sp|Q9JKT2|TR119_MOUSE Taste receptor type 2 member 119 OS=Mus
           musculus GN=Tas2r119 PE=1 SV=1
          Length = 335

 Score = 30.0 bits (66), Expect = 6.1
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 10/60 (16%)
 Frame = -3

Query: 306 HFELMKAFGFLIVLHFLVETY-----LGAIWNHLKEVAYLVYTWSP-----VGVSLAILS 157
           H  L+  F F + L FL+ T      L ++WNH +++  +V T  P     V   L+ILS
Sbjct: 171 HATLLSVFVFGLTLPFLIFTVAVLLLLSSLWNHSRQMRTMVGTREPSRHALVSAMLSILS 230
tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914641|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_C07.
         (497 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

 ***** No hits found ******