BP914644 |
Clone id |
YMU001_000061_C10 |
Library |
YMU01 |
Length |
473 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000061_C10. |
Accession |
BP914644 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2568Contig1 |
Sequence |
TTTTTTTTGGTTTCCATTGTATTGTCGATGGTGTGGCTCTTGACGTAGAGGCTTCGCTTG AGCTTTGACGTGGGCTTGTCGAAGGTAAAGCTGACTTGCGAGGATGATCTTATTCAATGT TTAGTTTGGCCTTAGCTTTTTCTATTTTGCAGATGGTTGTGTCTTTTGTGTTGATGTCTC TTGGACCATCTTTGTTGTTGTTGTTGATGCTTTTTGTTGTTGCCCGAAGAAGATATTCTT CCAACTCTTCGTTAGGACTAGAATTTCTTTGATGTGATGTGAGTCAACTATGTTGAAGTT GTCTTTGAAATCCCCATGACTCAACTTGAGTATTGCCTCCGCTATGCCAAAACTTGGGAT TGGTGTTTTAGCAGTGGTGTATACTCTTTCCTCCACTTCTTTAATTGTCGGCTTTCCCAT CATTATCCAATGGTCATATGACATTATATTCTTAGTAGCATAAGGATCAATTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54V71 |
Definition |
sp|Q54V71|Y6053_DICDI Uncharacterized protein DDB_G0280579 OS=Dictyostelium discoideum |
Align length |
64 |
Score (bit) |
42.4 |
E-value |
0.001 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q7RI00 |
Definition |
tr|Q7RI00|Q7RI00_PLAYO Putative zinc finger in N-recognin, putative (Fragment) OS=Plasmodium yoelii yoelii |
Align length |
62 |
Score (bit) |
38.9 |
E-value |
0.13 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914644|Adiantum capillus-veneris mRNA, clone: YMU001_000061_C10. (473 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q7RI00|Q7RI00_PLAYO Putative zinc finger in N-recognin, putat... 39 0.13 tr|Q5WC26|Q5WC26_BACSK Putative uncharacterized protein OS=Bacil... 36 0.84 tr|Q86JH8|Q86JH8_DICDI Putative uncharacterized protein OS=Dicty... 36 1.1 tr|Q55AX2|Q55AX2_DICDI SAM domain-containing protein OS=Dictyost... 36 1.1 tr|Q6YVX1|Q6YVX1_ORYSJ Os02g0558600 protein OS=Oryza sativa subs... 35 1.4 tr|A3A818|A3A818_ORYSJ Putative uncharacterized protein OS=Oryza... 35 1.4 tr|Q4YCS4|Q4YCS4_PLABE Asparagine/aspartate rich protein, putati... 35 1.4 tr|B4ADZ9|B4ADZ9_BACPU YlxF OS=Bacillus pumilus ATCC 7061 GN=BAT... 35 1.9 tr|B1DBQ3|B1DBQ3_9BACL Putative uncharacterized protein OS=Paeni... 35 1.9 tr|B8ADY0|B8ADY0_ORYSI Putative uncharacterized protein OS=Oryza... 35 1.9 tr|Q54X05|Q54X05_DICDI Putative uncharacterized protein OS=Dicty... 35 1.9 tr|A5E101|A5E101_LODEL Putative uncharacterized protein OS=Lodde... 35 1.9 tr|Q869T5|Q869T5_DICDI Similar to Dictyostelium discoideum (Slim... 35 2.4 tr|B6H4Q5|B6H4Q5_PENCH Pc13g10050 protein OS=Penicillium chrysog... 35 2.4 tr|B4PXY2|B4PXY2_DROYA GE15383 OS=Drosophila yakuba GN=GE15383 P... 34 3.2 tr|Q55A08|Q55A08_DICDI Putative uncharacterized protein OS=Dicty... 34 4.2 tr|Q59PF9|Q59PF9_CANAL Potential hyphal form cell wall protein O... 34 4.2 tr|Q54TM9|Q54TM9_DICDI Putative uncharacterized protein OS=Dicty... 33 5.4 tr|Q4Y5Y6|Q4Y5Y6_PLACH Asparagine/aspartate rich protein, putati... 33 5.4 tr|B6AAJ0|B6AAJ0_9CRYT Phosphofructokinase family protein OS=Cry... 33 5.4 tr|Q66RB7|Q66RB7_YEAST YFL013C OS=Saccharomyces cerevisiae GN=IE... 33 5.4 tr|Q59YU3|Q59YU3_CANAL Likely protein kinase OS=Candida albicans... 33 5.4 tr|B6HVR1|B6HVR1_PENCH Pc22g19280 protein OS=Penicillium chrysog... 33 5.4 tr|B3LUJ6|B3LUJ6_YEAS1 Ino eighty subunit 1 OS=Saccharomyces cer... 33 5.4 tr|A7A225|A7A225_YEAS7 INO80 complex subunit OS=Saccharomyces ce... 33 5.4 tr|A5E5D0|A5E5D0_LODEL Putative uncharacterized protein OS=Lodde... 33 5.4 tr|A6X552|A6X552_OCHA4 Band 7 protein OS=Ochrobactrum anthropi (... 33 7.1 tr|Q54C55|Q54C55_DICDI Transmembrane protein OS=Dictyostelium di... 33 7.1 tr|B6KSY2|B6KSY2_TOXGO Putative uncharacterized protein OS=Toxop... 33 7.1 tr|A8XZT0|A8XZT0_CAEBR Putative uncharacterized protein OS=Caeno... 33 7.1
>tr|Q7RI00|Q7RI00_PLAYO Putative zinc finger in N-recognin, putative (Fragment) OS=Plasmodium yoelii yoelii GN=PY03832 PE=4 SV=1 Length = 3053
Score = 38.9 bits (89), Expect = 0.13 Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 1/62 (1%) Frame = -2
Query: 307 QRQLQHS*LTSHQRNSSPNEELEEYLLRATTKSINNN-NKDGPRDINTKDTTICKIEKAK 131 ++QL+ S + S ++ELE TTK INN+ N+D DI ++ T+C+ EKAK Sbjct: 1977 KQQLKFSQFLDDELFSDEDDELE------TTKEINNDKNEDSENDIYKENNTLCEYEKAK 2030
Query: 130 AK 125 K Sbjct: 2031 EK 2032
>tr|Q5WC26|Q5WC26_BACSK Putative uncharacterized protein OS=Bacillus clausii (strain KSM-K16) GN=ABC3551 PE=4 SV=1 Length = 280
Score = 36.2 bits (82), Expect = 0.84 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 8/106 (7%) Frame = -2
Query: 310 FQRQLQHS*LTSHQR-NSSPNEELEEYLLRATTK-------SINNNNKDGPRDINTKDTT 155 F+ QL+ + L + EELEE + ++ ++++ K+ + I K+TT Sbjct: 119 FEEQLEEAKLEWEEEFREQIEEELEERITAEISEDYEDKLAALDDKIKEKEQTIEEKETT 178
Query: 154 ICKIEKAKAKLNIE*DHPRKSALPSTSPRQSSSEASTSRATPSTIQ 17 I K+E+ A + ++ ++A T QSS AST P T++ Sbjct: 179 ISKLEEEVASAST--NNGNETATTETETAQSSESASTDSCGPGTVK 222
>tr|Q86JH8|Q86JH8_DICDI Putative uncharacterized protein OS=Dictyostelium discoideum PE=4 SV=1 Length = 1845
Score = 35.8 bits (81), Expect = 1.1 Identities = 33/122 (27%), Positives = 51/122 (41%) Frame = -2
Query: 367 NTNPKFWHSGGNTQVESWGFQRQLQHS*LTSHQRNSSPNEELEEYLLRATTKSINNNNKD 188 N N K + N+ + G ++ + + N++ N K+ NNNNK+ Sbjct: 1000 NNNNKNNNRNNNSIAKKIGTNNNNNNTTIIKNNNNNNNNNNNNNNNNNNIIKNNNNNNKN 1059
Query: 187 GPRDINTKDTTICKIEKAKAKLNIE*DHPRKSALPSTSPRQSSSEASTSRATPSTIQWKP 8 N +T + KIE K +N P K T+ SSS +STS + T+ KP Sbjct: 1060 NN---NNNNTIVKKIETIKKDIN---KKPTK-----TTTTTSSSSSSTSSSNSLTVIKKP 1108
Query: 7 KK 2 K Sbjct: 1109 VK 1110
>tr|Q55AX2|Q55AX2_DICDI SAM domain-containing protein OS=Dictyostelium discoideum GN=dotA PE=4 SV=2 Length = 1845
Score = 35.8 bits (81), Expect = 1.1 Identities = 33/122 (27%), Positives = 51/122 (41%) Frame = -2
Query: 367 NTNPKFWHSGGNTQVESWGFQRQLQHS*LTSHQRNSSPNEELEEYLLRATTKSINNNNKD 188 N N K + N+ + G ++ + + N++ N K+ NNNNK+ Sbjct: 1000 NNNNKNNNRNNNSIAKKIGTNNNNNNTTIIKNNNNNNNNNNNNNNNNNNIIKNNNNNNKN 1059
Query: 187 GPRDINTKDTTICKIEKAKAKLNIE*DHPRKSALPSTSPRQSSSEASTSRATPSTIQWKP 8 N +T + KIE K +N P K T+ SSS +STS + T+ KP Sbjct: 1060 NN---NNNNTIVKKIETIKKDIN---KKPTK-----TTTTTSSSSSSTSSSNSLTVIKKP 1108
Query: 7 KK 2 K Sbjct: 1109 VK 1110
>tr|Q6YVX1|Q6YVX1_ORYSJ Os02g0558600 protein OS=Oryza sativa subsp. japonica GN=OSJNBb0038F20.19 PE=2 SV=1 Length = 593
Score = 35.4 bits (80), Expect = 1.4 Identities = 24/79 (30%), Positives = 42/79 (53%) Frame = -2
Query: 277 SHQRNSSPNEELEEYLLRATTKSINNNNKDGPRDINTKDTTICKIEKAKAKLNIE*DHPR 98 ++ R+ +E LE +L K I +N+ ++ I +++ K+++E PR Sbjct: 204 TNTRDVLNHEPLERKVL--APKHIVSNDNGENVAVSRIALPIASLQREHLKIDLERQEPR 261
Query: 97 KSALPSTSPRQSSSEASTS 41 K+AL S+ P +SS E STS Sbjct: 262 KNALISSMPTKSSKEPSTS 280
>tr|A3A818|A3A818_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_006940 PE=4 SV=1 Length = 796
Score = 35.4 bits (80), Expect = 1.4 Identities = 24/79 (30%), Positives = 42/79 (53%) Frame = -2
Query: 277 SHQRNSSPNEELEEYLLRATTKSINNNNKDGPRDINTKDTTICKIEKAKAKLNIE*DHPR 98 ++ R+ +E LE +L K I +N+ ++ I +++ K+++E PR Sbjct: 204 TNTRDVLNHEPLERKVL--APKHIVSNDNGENVAVSRIALPIASLQREHLKIDLERQEPR 261
Query: 97 KSALPSTSPRQSSSEASTS 41 K+AL S+ P +SS E STS Sbjct: 262 KNALISSMPTKSSKEPSTS 280
>tr|Q4YCS4|Q4YCS4_PLABE Asparagine/aspartate rich protein, putative (Fragment) OS=Plasmodium berghei GN=PB000094.01.0 PE=4 SV=1 Length = 2082
Score = 35.4 bits (80), Expect = 1.4 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%) Frame = -2
Query: 307 QRQLQHS*LTSHQRNSSPNEELEEYLLRATTKSINNN-NKDGPRDINTKDTTICKIEKAK 131 ++QL+ S + S + ELE TTK I N+ N+D DI ++ T+C+ EKAK Sbjct: 1889 KQQLKFSQFLDDEFFSDEDNELE------TTKEITNDKNEDAENDIYKENNTLCEYEKAK 1942
Query: 130 AK 125 K Sbjct: 1943 EK 1944
>tr|B4ADZ9|B4ADZ9_BACPU YlxF OS=Bacillus pumilus ATCC 7061 GN=BAT_2514 PE=4 SV=1 Length = 232
Score = 35.0 bits (79), Expect = 1.9 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 2/88 (2%) Frame = -2
Query: 280 TSHQRNSSPNEELEEYLLRATTKSINNNNKDGPRDINTKDTTICKIEKAKAKLN--IE*D 107 TS N+ + EL+E L+ T K N + +D+ T D I ++ + + L E D Sbjct: 66 TSSSHNNQSDAELKE--LKKTIKEQKNELEIAQKDLKTSDEEIKRLNQKISSLEKTSEND 123
Query: 106 HPRKSALPSTSPRQSSSEASTSRATPST 23 KSA S+S SSS+ S + A+ +T Sbjct: 124 ANDKSADDSSSNSSSSSDTSGNNASGTT 151
>tr|B1DBQ3|B1DBQ3_9BACL Putative uncharacterized protein OS=Paenibacillus sp. JDR-2 GN=Pjdr2DRAFT_2554 PE=4 SV=1 Length = 312
Score = 35.0 bits (79), Expect = 1.9 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = -2
Query: 361 NPKFWHSGGNTQVESWGFQRQLQHS*LTSHQRNSSPNEELEEY 233 N WH G + Q E W + + + + H +NS PNEE Y Sbjct: 33 NIMMWHDGKDAQGEGWKSELKQEKQMWSDHLKNSDPNEENRAY 75
>tr|B8ADY0|B8ADY0_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_07670 PE=4 SV=1 Length = 605
Score = 35.0 bits (79), Expect = 1.9 Identities = 24/79 (30%), Positives = 42/79 (53%) Frame = -2
Query: 277 SHQRNSSPNEELEEYLLRATTKSINNNNKDGPRDINTKDTTICKIEKAKAKLNIE*DHPR 98 ++ R+ +E LE +L K I +N+ ++ I +++ K+++E PR Sbjct: 204 TNTRDVLNHEPLERKVL--APKHIVSNDNGENVAVSRIVLPIASLQREHLKIDLERQEPR 261
Query: 97 KSALPSTSPRQSSSEASTS 41 K+AL S+ P +SS E STS Sbjct: 262 KNALISSMPTKSSKEPSTS 280
|