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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914652
Clone id YMU001_000061_D06
Library
Length 601
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000061_D06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTCTCTCAAAACGAGAGAGTTGAGATAATGTAAAAAAAACTAGCACCATACACATCCAAA
CTCCTTGCTCGATACGAGCCAGGGAGGCAAAAATAATTACAAGTTGTTCAAAAGCACCAC
CTAATATGAGTCCATAACCGGGCTTTTTACAAGGAAGCCACTACAGACACATAACGTCAA
GCTAGATCCCATTGGATGCCACCACCTTATTATTGAACCTTTTGAATCAGTACTAGATCA
ATACAAAGTATGGTAGAAAATACTCCATGGTTTGACAAATTTAGAACTTCCTTGCAAATT
TGGTGATACTATTATTATTTTCATCCAACTAACATGATCTTCCCACCACGAGCCTCTTTT
TTACTTTCACGAAGAGCTTCTCCAAAGTTTTCAAGTGGGAAGGATTTCCCAGGCAAGGGT
GTCAAAATCTTGTTTGTCAAAAGAGTCATCACTTGCACCGCTGTATCATCCACCTTTGTT
TCATTCCTCAAGTAGTTTGACAATAGCCACCACCTTATGCGTACACCTCTCATGAGGTCC
AACGTGCTCAGACTTATATTCCACCCAGATAGCACTCCATACACATATATAGTTCCATCA
T
■■Homology search results ■■ -
sp_hit_id Q8JFV8
Definition sp|Q8JFV8|VAT1_DANRE Synaptic vesicle membrane protein VAT-1 homolog OS=Danio rerio
Align length 88
Score (bit) 36.2
E-value 0.13
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914652|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_D06.
         (601 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8JFV8|VAT1_DANRE Synaptic vesicle membrane protein VAT-1 hom...    36   0.13 
sp|Q6BLV6|ETR1_DEBHA Probable trans-2-enoyl-CoA reductase 1, mit...    31   4.2  
sp|Q5M7S0|S38A9_XENTR Putative sodium-coupled neutral amino acid...    30   7.1  
sp|Q62465|VAT1_MOUSE Synaptic vesicle membrane protein VAT-1 hom...    30   9.3  

>sp|Q8JFV8|VAT1_DANRE Synaptic vesicle membrane protein VAT-1
           homolog OS=Danio rerio GN=vat1 PE=2 SV=1
          Length = 484

 Score = 36.2 bits (82), Expect = 0.13
 Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
 Frame = -3

Query: 584 VYGVLSGW--NISLSTLDLMRGVRIRWWLLSNYLRNETKVDDTAVQ-VMTLLTNKILTPL 414
           ++ V   W    S+ TL L++G R        YL +ET++ D A+  VM L     + P 
Sbjct: 320 LFAVAKTWYQQFSVHTLSLIQGNRSVCGFHLGYLDSETELIDQAMTAVMDLYRQGKVKPR 379

Query: 413 PGKSFPLENFGEALRESKKEARGGKIML 330
              ++ LE  G+A+R  ++    GKI+L
Sbjct: 380 IDSTYHLEQVGDAMRRMQERNNIGKIIL 407


>sp|Q6BLV6|ETR1_DEBHA Probable trans-2-enoyl-CoA reductase 1,
           mitochondrial OS=Debaryomyces hansenii GN=ETR1 PE=3 SV=2
          Length = 378

 Score = 31.2 bits (69), Expect = 4.2
 Identities = 25/96 (26%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
 Frame = -3

Query: 590 IYVYGVLSGWNISLSTLD-LMRGVRIR-WWLLSNYLRNETKVDDTAVQVMTLLTNKILTP 417
           +  YG +SG  +  S+ + L + V  + +WL +N  RN     DT  +V+ L  +  + P
Sbjct: 281 LVTYGGMSGQPLMYSSSESLFKNVTSKAYWLTANTKRNPQSKVDTVKKVLALYKSGDIKP 340

Query: 416 LP--GKSFPL----ENFGEALRESKKEARGGKIMLV 327
           +P  GK F +    +++ +   +   E++ GK ++V
Sbjct: 341 VPFNGKEFNIKSTSDDYIKLFLKGIAESKTGKQVIV 376


>sp|Q5M7S0|S38A9_XENTR Putative sodium-coupled neutral amino acid
           transporter 9 OS=Xenopus tropicalis GN=slc38a9 PE=2 SV=1
          Length = 554

 Score = 30.4 bits (67), Expect = 7.1
 Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
 Frame = -3

Query: 587 YVYGVLSGWNISLSTLDLMRGVRIRWW-LLSNYLRNETK-----VDDTAVQVMTLLTN-- 432
           Y +G    W+  L +L  + G  I +W L+SN+L N  K     V+D  V    L  N  
Sbjct: 184 YYFGSFGRWSSLLFSLVSLIGAMIVYWVLMSNFLFNTGKFIYNYVNDVNVTDDVLSNNGS 243

Query: 431 -KILTPLPGKSFPL 393
            K++ P P  + PL
Sbjct: 244 DKVICPNPDSTRPL 257


>sp|Q62465|VAT1_MOUSE Synaptic vesicle membrane protein VAT-1
           homolog OS=Mus musculus GN=Vat1 PE=2 SV=3
          Length = 406

 Score = 30.0 bits (66), Expect = 9.3
 Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
 Frame = -3

Query: 563 WN-ISLSTLDLMRGVRIRWWLLSNYLRNETKVDDTAVQVMTLLTNK-ILTPLPGKSFPLE 390
           WN  S++ L L++  R        YL  E ++ ++ V  +  L N+  + P     +P E
Sbjct: 319 WNQFSVTALQLLQANRAVCGFHLGYLDGEVELVNSVVTRLVALYNQGHIKPRIDSVWPFE 378

Query: 389 NFGEALRESKKEARGGKIMLV 327
              +A+++ +++   GK++LV
Sbjct: 379 KVADAMKQMQEKKNIGKVLLV 399
tr_hit_id A9P0G0
Definition tr|A9P0G0|A9P0G0_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 90
Score (bit) 81.3
E-value 4.0e-14
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914652|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_D06.
         (601 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9P0G0|A9P0G0_PICSI Putative uncharacterized protein OS=Picea...    81   4e-14
tr|A9RRC5|A9RRC5_PHYPA Predicted protein OS=Physcomitrella paten...    77   6e-13
tr|A9T5D5|A9T5D5_PHYPA Predicted protein OS=Physcomitrella paten...    68   4e-10
tr|A5UWK7|A5UWK7_ROSS1 Alcohol dehydrogenase, zinc-binding domai...    45   0.004
tr|A7NF67|A7NF67_ROSCS Alcohol dehydrogenase zinc-binding domain...    44   0.009
tr|Q1YPC8|Q1YPC8_9GAMM NADPH quinone reductase or Zn-dependent o...    39   0.18 
tr|A3HTE6|A3HTE6_9SPHI NADPH quinone reductase or Zn-dependent o...    39   0.23 
tr|A0Z6U1|A0Z6U1_9GAMM Probable nuclear receptor binding factor ...    39   0.23 
tr|A8J6Y3|A8J6Y3_CHLRE Predicted protein OS=Chlamydomonas reinha...    39   0.23 
tr|Q2JZT1|Q2JZT1_RHIEC Probable zinc-dependent oxidoreductase pr...    38   0.39 
tr|B1G9J9|B1G9J9_9BURK Alcohol dehydrogenase zinc-binding domain...    38   0.39 
tr|A0CJM4|A0CJM4_PARTE Chromosome undetermined scaffold_2, whole...    38   0.39 
tr|Q1D9C2|Q1D9C2_MYXXD Oxidoreductase, zinc-binding dehydrogenas...    37   0.67 
tr|Q1CZD1|Q1CZD1_MYXXD Oxidoreductase, zinc-binding dehydrogenas...    37   0.87 
tr|Q8VQC9|Q8VQC9_MYXXA Putative oxidoreductase OS=Myxococcus xan...    37   0.87 
tr|Q4KME8|Q4KME8_DANRE Vesicle amine transport protein 1 homolog...    36   1.5  
tr|B3Q4G8|B3Q4G8_RHIE6 Probable zinc-dependent oxidoreductase pr...    36   1.5  
tr|Q5CR44|Q5CR44_CRYPV Putative uncharacterized protein OS=Crypt...    36   1.5  
tr|Q582N8|Q582N8_9TRYP Oxidoreductase, putative OS=Trypanosoma b...    36   1.9  
tr|B5ZZZ7|B5ZZZ7_RHILW Alcohol dehydrogenase GroES domain protei...    35   2.5  
tr|A4FI68|A4FI68_SACEN Quinone oxidoreductase OS=Saccharopolyspo...    35   3.3  
tr|A9EEL6|A9EEL6_9RHOB Nuclear receptor binding factor related p...    35   3.3  
tr|Q93CP0|Q93CP0_9BURK Putative oxidoreductase OS=Burkholderia s...    35   4.3  
tr|Q5CKB5|Q5CKB5_CRYHO Putative uncharacterized protein (Fragmen...    35   4.4  
tr|B2UAD0|B2UAD0_RALPJ Beta-ketoacyl synthase OS=Ralstonia picke...    34   5.6  
tr|B5WLB2|B5WLB2_9BURK Beta-ketoacyl synthase OS=Burkholderia sp...    34   7.4  
tr|A4BRG8|A4BRG8_9GAMM Fe(III)-pyochelin receptor OS=Nitrococcus...    34   7.4  
tr|Q4FXV3|Q4FXV3_LEIMA Putative uncharacterized protein OS=Leish...    34   7.4  
tr|Q23RK3|Q23RK3_TETTH Oxidoreductase, zinc-binding dehydrogenas...    34   7.4  
tr|A4I4G0|A4I4G0_LEIIN Putative uncharacterized protein OS=Leish...    34   7.4  

>tr|A9P0G0|A9P0G0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 336

 Score = 81.3 bits (199), Expect = 4e-14
 Identities = 35/90 (38%), Positives = 59/90 (65%)
 Frame = -3

Query: 596 GTIYVYGVLSGWNISLSTLDLMRGVRIRWWLLSNYLRNETKVDDTAVQVMTLLTNKILTP 417
           GT+++YG L   ++ +   DLMR V++ WW L+ +  +E         ++ L+  K++TP
Sbjct: 246 GTVFIYGTLGSSDVVVGIDDLMREVKVSWWNLNAFAEDEDNKKKCISDMLKLMDQKVITP 305

Query: 416 LPGKSFPLENFGEALRESKKEARGGKIMLV 327
           L G++F L+ FG+A+ ES+K ARGGKI+L+
Sbjct: 306 LAGRTFTLDEFGKAIIESEKYARGGKILLI 335


>tr|A9RRC5|A9RRC5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_160552 PE=4 SV=1
          Length = 380

 Score = 77.4 bits (189), Expect = 6e-13
 Identities = 42/109 (38%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
 Frame = -3

Query: 596 GTIYVYGVLSGWNISLSTLDLMRGVRIRWWLLSNYLRNETKVDDTAVQVMTLLTNKILTP 417
           G ++VYG L GW+I++S LDL+R V I+++ L+ +L      +     VM  L   +L P
Sbjct: 263 GKVFVYGTLGGWDITVSKLDLIRNVEIKYYRLTRWLEKGNNKEKVMRDVMRYLEAGVLVP 322

Query: 416 LPGKSFPLENFGEALRESKKEARGGKIML---VG*K***YHQICKEVLN 279
             GK F LE+F  A+ ES+++ARGGK+M    +G K   + ++C+ V N
Sbjct: 323 NFGKKFDLEDFRAAICESERQARGGKVMTRAKLGRKHRIHVKVCQAVRN 371


>tr|A9T5D5|A9T5D5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_191779 PE=4 SV=1
          Length = 332

 Score = 68.2 bits (165), Expect = 4e-10
 Identities = 32/89 (35%), Positives = 53/89 (59%)
 Frame = -3

Query: 596 GTIYVYGVLSGWNISLSTLDLMRGVRIRWWLLSNYLRNETKVDDTAVQVMTLLTNKILTP 417
           G + VYGVLS  + +++  DL RGV +  W+L N+  +  K  +    V  LL  K++ P
Sbjct: 242 GQVLVYGVLSSVDATVAITDLFRGVHVTGWILYNFSPDPAKRQEYIENVAKLLEEKVIVP 301

Query: 416 LPGKSFPLENFGEALRESKKEARGGKIML 330
           L G+ F L +F  A+ ++++  RGGK++L
Sbjct: 302 LEGEKFDLADFKAAMNKTEEVGRGGKVLL 330


>tr|A5UWK7|A5UWK7_ROSS1 Alcohol dehydrogenase, zinc-binding domain
           protein OS=Roseiflexus sp. (strain RS-1) GN=RoseRS_2636
           PE=4 SV=1
          Length = 326

 Score = 44.7 bits (104), Expect = 0.004
 Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
 Frame = -3

Query: 596 GTIYVYGVLSGWNISLST-LDLMRGVRIRWWLLSNYLRNET--KVDDTAVQVMTLLTNKI 426
           GT+ VYG ++G ++++   + L R   IR W L+++ ++ T  +V      +  L+ +  
Sbjct: 233 GTMLVYGAIAGESLTIHPGMLLFRSATIRGWWLTHWFQSATPSQVQSLFDTLFRLIGDGT 292

Query: 425 LTPLPGKSFPLENFGEALRESKKEARGGKIMLVG 324
           L+      + L +  EA+RE++++ R GK++LVG
Sbjct: 293 LSTPIVAEYDLADVREAVREAERKTRPGKVLLVG 326


>tr|A7NF67|A7NF67_ROSCS Alcohol dehydrogenase zinc-binding domain
           protein OS=Roseiflexus castenholzii (strain DSM 13941 /
           HLO8) GN=Rcas_2212 PE=4 SV=1
          Length = 326

 Score = 43.5 bits (101), Expect = 0.009
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
 Frame = -3

Query: 596 GTIYVYGVLSG--WNISLSTLDLMRGVRIRWWLLSNYLRNET--KVDDTAVQVMTLLTNK 429
           GT+ VYG ++G    I L TL L R   IR W LS++L+  T  +  D    +  L+ + 
Sbjct: 233 GTMLVYGAIAGEPLTIHLGTL-LFRSATIRGWWLSHWLQTATPEQAQDLFTTLFGLIADG 291

Query: 428 ILTPLPGKSFPLENFGEALRESKKEARGGKIMLVG 324
            L       + L +  EA+  ++ + R GK++LVG
Sbjct: 292 TLHTPVAAEYDLGDVREAVIAAEHKTRPGKVLLVG 326


>tr|Q1YPC8|Q1YPC8_9GAMM NADPH quinone reductase or Zn-dependent
           oxidoreductase OS=gamma proteobacterium HTCC2207
           GN=GB2207_03040 PE=4 SV=1
          Length = 361

 Score = 39.3 bits (90), Expect = 0.18
 Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
 Frame = -3

Query: 596 GTIYVYGVLSGWNISLST-LDLMRGVRIR-WWLLSNYLRNETKVDDTAV-QVMTLLTNKI 426
           GT+  YGVLSG   S++T   +   + +R +WL   Y   + K    A  Q++ L+   +
Sbjct: 265 GTLVAYGVLSGQPASVNTGKVIFNDISLRGFWLYKWYQTADMKTKQAAFGQIIPLIAQGV 324

Query: 425 LTPLPGKSFPLENFGEALRESKKEARGGKIMLV 327
           L       F ++   EA+  +    R GK+++V
Sbjct: 325 LKANVDSRFSIDQIEEAVSRAAAPGRNGKVLIV 357


>tr|A3HTE6|A3HTE6_9SPHI NADPH quinone reductase or Zn-dependent
           oxidoreductase OS=Algoriphagus sp. PR1 GN=ALPR1_12875
           PE=4 SV=1
          Length = 320

 Score = 38.9 bits (89), Expect = 0.23
 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
 Frame = -3

Query: 599 DGTIYVYGVLSGWNISLST-LDLMRGVRIR-WWLLSNYLRNETKVDDTAVQ-VMTLLTNK 429
           +G + V+G LS  NI L++ L +   +R+  +WL       + K    A Q V   L +K
Sbjct: 226 NGLMMVFGSLSLENIPLNSGLMIFNSLRVEGFWLTKLMTEIDPKDRFQAFQTVFKFLMDK 285

Query: 428 ILTPLPGKSFPLENFGEALRESKKEARGGKIMLV 327
                  + FPLE F EA++  +K  R GKI+L+
Sbjct: 286 RSQVDVAEKFPLEKFQEAIKAYEKGGRNGKILLI 319


>tr|A0Z6U1|A0Z6U1_9GAMM Probable nuclear receptor binding factor
           related protein OS=marine gamma proteobacterium HTCC2080
           GN=MGP2080_04955 PE=4 SV=1
          Length = 367

 Score = 38.9 bits (89), Expect = 0.23
 Identities = 24/93 (25%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
 Frame = -3

Query: 596 GTIYVYGVLSGWNISLST-LDLMRGVRIRWWLLSNYLRNETKVDDTAV--QVMTLLTNKI 426
           GTI  YG+LSG   SL+T + + + +R R + L  +    +  D  A   +++ L+   +
Sbjct: 271 GTIVAYGMLSGKPASLNTGMTIFKDIRNRGFWLQKWYETASMEDKQAAFGKIIPLIATGV 330

Query: 425 LTPLPGKSFPLENFGEALRESKKEARGGKIMLV 327
           L       F + +   A+  + ++ R GK+++V
Sbjct: 331 LKADVDSRFAVSDIKAAVTRAAQDGRNGKVLIV 363


>tr|A8J6Y3|A8J6Y3_CHLRE Predicted protein OS=Chlamydomonas
           reinhardtii GN=CHLREDRAFT_185022 PE=4 SV=1
          Length = 347

 Score = 38.9 bits (89), Expect = 0.23
 Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 3/95 (3%)
 Frame = -3

Query: 599 DGTIYVYGVLSGWNISLSTLD-LMRGVRIRWWLLSNYLRNETKVDDTAV--QVMTLLTNK 429
           +G I +YG ++G ++  + L+ L RGV ++ + +  ++   T  +  AV  +V+ L+ + 
Sbjct: 253 NGVIIMYGAMNGIDLKWNVLEPLFRGVSMKGFWVWPWMNARTAEERRAVMERVVRLMVSG 312

Query: 428 ILTPLPGKSFPLENFGEALRESKKEARGGKIMLVG 324
           +L P    + PLE   EAL+      R  K++L G
Sbjct: 313 VLPPHKVDARPLEGAVEALQYQATVGRDAKLVLRG 347


>tr|Q2JZT1|Q2JZT1_RHIEC Probable zinc-dependent oxidoreductase
           protein OS=Rhizobium etli (strain CFN 42 / ATCC 51251)
           GN=RHE_PF00011 PE=4 SV=1
          Length = 322

 Score = 38.1 bits (87), Expect = 0.39
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
 Frame = -3

Query: 581 YGVLSGWNISLSTLDLMRGVRIRWWLLSNYLRNETK--VDDTAVQVMTLLTNKILTPLPG 408
           YG+LSG +I  S       +   +  L  ++ +ET   V     +V  ++ +K++     
Sbjct: 236 YGLLSGESIPPSFWASHPDIAFSFCHLREWVHSETMGDVQRAYAEVAAMIASKVIATEVR 295

Query: 407 KSFPLENFGEALRESKKEARGGKIML 330
           + FPLE  GEAL  +     GGK++L
Sbjct: 296 EVFPLEKIGEALHAALPFRTGGKVLL 321