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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914654
Clone id YMU001_000061_D08
Library
Length 506
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000061_D08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CGGCCAGGAGACTGCAGTGAAATTTATGCTTCCACTGAAAAAGCACAGAGGGAACTACAA
TGGAAAGCTGTCTTTGGAGTAGATGATATGTGTCGAGATCAATGGAACTGGGCTAGTAAG
AATCCTTGGGGCTATAGGGATCCGGATTTTATTACAGACAGTTAGCCTTAAAGGCTTTCA
GCTTCATGCATCAGCTTATTGGTTGATACGAAGCATCACAAAAGATTATCAGATTCTAAA
CTCAATTGGGAAGACAATGGTGGGCGTTTTGTACAGTGCTGATTAATCTTCGTACAATTC
GACATTTGGACATGCAATCGTCGAACAGGAGAGTAGCCTTCTGCTGCTGCATTTACTGTG
CTCATGTCTTGTATTCTGTCTTATCATTTTTGGAAGTTGGGCAGCAGCGAAGTGGTTATT
TTTGGAATTGTGCGTGTACTCTCCGTGCACAACATTCAATTATTGTTGCACACAGAAGTT
CACAGACTTGCTTGTGAACTTGTACC
■■Homology search results ■■ -
sp_hit_id O65781
Definition sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis tetragonoloba
Align length 45
Score (bit) 84.3
E-value 3.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914654|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_D08.
         (506 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48 OS=Cyamopsi...    84   3e-16
sp|Q43070|GALE1_PEA UDP-glucose 4-epimerase OS=Pisum sativum GN=...    84   4e-16
sp|O65780|GALE1_CYATE UDP-glucose 4-epimerase GEPI42 OS=Cyamopsi...    84   5e-16
sp|Q42605|GALE1_ARATH UDP-glucose 4-epimerase 1 OS=Arabidopsis t...    81   2e-15
sp|Q9T0A7|GALE3_ARATH UDP-glucose 4-epimerase 3 OS=Arabidopsis t...    78   3e-14
sp|Q9SN58|GALE2_ARATH UDP-glucose 4-epimerase 2 OS=Arabidopsis t...    77   6e-14
sp|Q553X7|GALE_DICDI UDP-glucose 4-epimerase OS=Dictyostelium di...    58   2e-08
sp|P40801|GAL10_PACTA Bifunctional protein GAL10 OS=Pachysolen t...    56   1e-07
sp|Q9CNY5|GALE_PASMU UDP-glucose 4-epimerase OS=Pasteurella mult...    55   1e-07
sp|P55180|GALE_BACSU UDP-glucose 4-epimerase OS=Bacillus subtili...    55   2e-07
sp|Q9W0P5|GALE_DROME Probable UDP-glucose 4-epimerase OS=Drosoph...    54   5e-07
sp|P04397|GAL10_YEAST Bifunctional protein GAL10 OS=Saccharomyce...    53   7e-07
sp|Q14376|GALE_HUMAN UDP-glucose 4-epimerase OS=Homo sapiens GN=...    52   2e-06
sp|Q9HDU3|GAL10_SCHPO Bifunctional protein gal10 OS=Schizosaccha...    52   2e-06
sp|Q56093|GALE_SALTI UDP-glucose 4-epimerase OS=Salmonella typhi...    51   3e-06
sp|P35673|GALE_ERWAM UDP-glucose 4-epimerase OS=Erwinia amylovor...    51   3e-06
sp|P22715|GALE_SALTY UDP-glucose 4-epimerase OS=Salmonella typhi...    51   4e-06
sp|Q59678|GALE_PASHA UDP-glucose 4-epimerase OS=Pasteurella haem...    51   4e-06
sp|P09147|GALE_ECOLI UDP-glucose 4-epimerase OS=Escherichia coli...    51   4e-06
sp|Q5R8D0|GALE_PONAB UDP-glucose 4-epimerase OS=Pongo abelii GN=...    50   6e-06
sp|Q8R059|GALE_MOUSE UDP-glucose 4-epimerase OS=Mus musculus GN=...    50   6e-06
sp|P24325|GALE_HAEIN UDP-glucose 4-epimerase OS=Haemophilus infl...    50   6e-06
sp|P18645|GALE_RAT UDP-glucose 4-epimerase OS=Rattus norvegicus ...    49   1e-05
sp|Q9F7D4|GALE_YERPE UDP-glucose 4-epimerase OS=Yersinia pestis ...    49   2e-05
sp|Q57301|GALE_YEREN UDP-glucose 4-epimerase OS=Yersinia enteroc...    47   4e-05
sp|P09609|GAL10_KLULA Bifunctional protein GAL10 OS=Kluyveromyce...    47   7e-05
sp|Q9Y7X5|YGRE_SCHPO Uncharacterized protein C365.14c OS=Schizos...    43   0.001
sp|P21977|GALE_STRTR UDP-glucose 4-epimerase OS=Streptococcus th...    41   0.003
sp|P56986|GALE_NEIMC UDP-glucose 4-epimerase OS=Neisseria mening...    41   0.004
sp|Q05026|GALE_NEIGO UDP-glucose 4-epimerase OS=Neisseria gonorr...    40   0.006

>sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48 OS=Cyamopsis
           tetragonoloba PE=2 SV=1
          Length = 350

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 33/45 (73%), Positives = 39/45 (86%)
 Frame = +1

Query: 1   RPGDCSEIYASTEKAQRELQWKAVFGVDDMCRDQWNWASKNPWGY 135
           RPGD   +YAST KA+REL WKA +G+D+MCRDQWNWASKNP+GY
Sbjct: 298 RPGDAEVVYASTNKAERELNWKAKYGIDEMCRDQWNWASKNPYGY 342


>sp|Q43070|GALE1_PEA UDP-glucose 4-epimerase OS=Pisum sativum
           GN=GALE PE=2 SV=1
          Length = 350

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 32/45 (71%), Positives = 39/45 (86%)
 Frame = +1

Query: 1   RPGDCSEIYASTEKAQRELQWKAVFGVDDMCRDQWNWASKNPWGY 135
           RPGD +E+YAST KA++EL WKA +GV++MCRDQWNWA  NPWGY
Sbjct: 302 RPGDATEVYASTAKAEKELGWKAKYGVEEMCRDQWNWAKNNPWGY 346


>sp|O65780|GALE1_CYATE UDP-glucose 4-epimerase GEPI42 OS=Cyamopsis
           tetragonoloba PE=2 SV=1
          Length = 354

 Score = 83.6 bits (205), Expect = 5e-16
 Identities = 32/46 (69%), Positives = 40/46 (86%)
 Frame = +1

Query: 1   RPGDCSEIYASTEKAQRELQWKAVFGVDDMCRDQWNWASKNPWGYR 138
           RPGD + +YASTEKA++EL WKA +GV++MCRDQW WAS NPWGY+
Sbjct: 306 RPGDATAVYASTEKAEKELGWKAKYGVEEMCRDQWKWASNNPWGYQ 351


>sp|Q42605|GALE1_ARATH UDP-glucose 4-epimerase 1 OS=Arabidopsis
           thaliana GN=At1g12780 PE=1 SV=2
          Length = 351

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 31/47 (65%), Positives = 40/47 (85%)
 Frame = +1

Query: 1   RPGDCSEIYASTEKAQRELQWKAVFGVDDMCRDQWNWASKNPWGYRD 141
           R GD + +YASTEKA++EL WKA +GVD+MCRDQW WA+ NPWGY++
Sbjct: 303 RSGDATAVYASTEKAEKELGWKAKYGVDEMCRDQWKWANNNPWGYQN 349


>sp|Q9T0A7|GALE3_ARATH UDP-glucose 4-epimerase 3 OS=Arabidopsis
           thaliana GN=At4g23920 PE=2 SV=1
          Length = 350

 Score = 77.8 bits (190), Expect = 3e-14
 Identities = 31/45 (68%), Positives = 37/45 (82%)
 Frame = +1

Query: 1   RPGDCSEIYASTEKAQRELQWKAVFGVDDMCRDQWNWASKNPWGY 135
           RPGD   +YASTEKA+REL WKA  G+++MCRD WNWAS NP+GY
Sbjct: 297 RPGDAEVVYASTEKAERELNWKAKNGIEEMCRDLWNWASNNPYGY 341


>sp|Q9SN58|GALE2_ARATH UDP-glucose 4-epimerase 2 OS=Arabidopsis
           thaliana GN=At4g10960 PE=2 SV=3
          Length = 351

 Score = 76.6 bits (187), Expect = 6e-14
 Identities = 29/45 (64%), Positives = 37/45 (82%)
 Frame = +1

Query: 1   RPGDCSEIYASTEKAQRELQWKAVFGVDDMCRDQWNWASKNPWGY 135
           RPGD   +YASTE+A+ EL WKA +G+++MCRD WNWAS NP+GY
Sbjct: 298 RPGDAEVVYASTERAESELNWKAKYGIEEMCRDLWNWASNNPYGY 342


>sp|Q553X7|GALE_DICDI UDP-glucose 4-epimerase OS=Dictyostelium
           discoideum GN=galE PE=1 SV=1
          Length = 344

 Score = 58.2 bits (139), Expect = 2e-08
 Identities = 25/47 (53%), Positives = 28/47 (59%)
 Frame = +1

Query: 1   RPGDCSEIYASTEKAQRELQWKAVFGVDDMCRDQWNWASKNPWGYRD 141
           R GD +  +A   KA +EL WKA    DDMCRD W W S NP GY D
Sbjct: 297 RKGDVASSFADPSKALKELGWKATHNQDDMCRDAWKWQSLNPNGYSD 343


>sp|P40801|GAL10_PACTA Bifunctional protein GAL10 OS=Pachysolen
           tannophilus GN=GAL10 PE=2 SV=1
          Length = 689

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 20/46 (43%), Positives = 32/46 (69%)
 Frame = +1

Query: 1   RPGDCSEIYASTEKAQRELQWKAVFGVDDMCRDQWNWASKNPWGYR 138
           R GD   + A+ ++A  EL+WKA   ++D C+D WNW +KNP+G++
Sbjct: 299 RDGDVLNLTANPKRANTELKWKAQLSINDACKDLWNWTTKNPFGFQ 344


>sp|Q9CNY5|GALE_PASMU UDP-glucose 4-epimerase OS=Pasteurella
           multocida GN=galE PE=3 SV=1
          Length = 338

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 22/47 (46%), Positives = 29/47 (61%)
 Frame = +1

Query: 1   RPGDCSEIYASTEKAQRELQWKAVFGVDDMCRDQWNWASKNPWGYRD 141
           RPGD +  Y+    A+ EL W A  G++ M +D W+W  KNP GYRD
Sbjct: 292 RPGDIATCYSDPSLAKTELNWTAARGLEQMMKDTWHWQKKNPKGYRD 338


>sp|P55180|GALE_BACSU UDP-glucose 4-epimerase OS=Bacillus subtilis
           GN=galE PE=3 SV=1
          Length = 339

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 22/49 (44%), Positives = 31/49 (63%)
 Frame = +1

Query: 1   RPGDCSEIYASTEKAQRELQWKAVFGVDDMCRDQWNWASKNPWGYRDPD 147
           RPGD +  +A   KA+REL W+A  G+++MC D W W S N  GY+  +
Sbjct: 291 RPGDIATCFADPAKAKRELGWEAKRGLEEMCADSWRWQSSNVNGYKSAE 339
tr_hit_id A9PG00
Definition tr|A9PG00|A9PG00_POPTR Putative uncharacterized protein OS=Populus trichocarpa
Align length 49
Score (bit) 88.6
E-value 2.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914654|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_D08.
         (506 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9PG00|A9PG00_POPTR Putative uncharacterized protein OS=Popul...    89   2e-16
tr|B7FIW1|B7FIW1_MEDTR Putative uncharacterized protein OS=Medic...    88   3e-16
tr|A9TFR4|A9TFR4_PHYPA Predicted protein OS=Physcomitrella paten...    88   3e-16
tr|A6MD13|A6MD13_9ORYZ UDP glucose-4 epimerase OS=Oryza brachyan...    87   3e-16
tr|Q8H0B7|Q8H0B7_ORYSJ Putative UDP-glucose 4-epimerase OS=Oryza...    87   6e-16
tr|Q652A8|Q652A8_ORYSJ Os09g0526700 protein OS=Oryza sativa subs...    87   6e-16
tr|B8BDM3|B8BDM3_ORYSI Putative uncharacterized protein OS=Oryza...    87   6e-16
tr|B8BDM2|B8BDM2_ORYSI Putative uncharacterized protein OS=Oryza...    87   6e-16
tr|A3C0T7|A3C0T7_ORYSJ Putative uncharacterized protein OS=Oryza...    87   6e-16
tr|B7FK31|B7FK31_MEDTR Putative uncharacterized protein OS=Medic...    86   8e-16
tr|B6TA76|B6TA76_MAIZE UDP-glucose 4-epimerase OS=Zea mays PE=2 ...    85   2e-15
tr|B4FU63|B4FU63_MAIZE Putative uncharacterized protein OS=Zea m...    85   2e-15
tr|B4FG89|B4FG89_MAIZE Putative uncharacterized protein OS=Zea m...    85   2e-15
tr|Q1XG32|Q1XG32_9POAL UDP-galactose epimerase OS=Paspalum vagin...    84   3e-15
tr|B8LKM2|B8LKM2_PICSI Putative uncharacterized protein OS=Picea...    84   3e-15
tr|B0M3E8|B0M3E8_PEA UDP-galactose 4-epimerase (Fragment) OS=Pis...    84   4e-15
tr|Q9SGX0|Q9SGX0_ARATH F1N19.2 OS=Arabidopsis thaliana PE=3 SV=1       84   5e-15
tr|Q9C7W7|Q9C7W7_ARATH UDP-galactose 4-epimerase, putative; 6572...    84   5e-15
tr|Q6XP48|Q6XP48_SOLTU UDP-Glc-4-epimerase OS=Solanum tuberosum ...    83   7e-15
tr|Q9CAM5|Q9CAM5_ARATH Uridine diphosphate glucose epimerase, pu...    82   1e-14
tr|Q8LDN8|Q8LDN8_ARATH Uridine diphosphate glucose epimerase, pu...    82   1e-14
tr|B6TQ45|B6TQ45_MAIZE UDP-glucose 4-epimerase GEPI48 OS=Zea may...    82   1e-14
tr|Q6XZA0|Q6XZA0_SOLTU UDP-glucose 4-epimerase OS=Solanum tubero...    82   1e-14
tr|A9SPG4|A9SPG4_PHYPA Predicted protein OS=Physcomitrella paten...    82   1e-14
tr|Q8LNZ3|Q8LNZ3_ORYSJ Os05g0595100 protein OS=Oryza sativa subs...    82   2e-14
tr|A2Y861|A2Y861_ORYSI Putative uncharacterized protein OS=Oryza...    82   2e-14
tr|Q58IJ5|Q58IJ5_HORVU UDP-D-glucose epimerase 2 OS=Hordeum vulg...    81   2e-14
tr|Q6K2E1|Q6K2E1_ORYSJ Os09g0323000 protein OS=Oryza sativa subs...    80   6e-14
tr|B8BEF8|B8BEF8_ORYSI Putative uncharacterized protein OS=Oryza...    80   6e-14
tr|A7QU91|A7QU91_VITVI Chromosome chr2 scaffold_176, whole genom...    80   6e-14

>tr|A9PG00|A9PG00_POPTR Putative uncharacterized protein OS=Populus
           trichocarpa PE=2 SV=1
          Length = 348

 Score = 88.6 bits (218), Expect = 2e-16
 Identities = 35/49 (71%), Positives = 42/49 (85%)
 Frame = +1

Query: 1   RPGDCSEIYASTEKAQRELQWKAVFGVDDMCRDQWNWASKNPWGYRDPD 147
           RPGD   +YA+TEKA+R+L WKA +GVD+MCRDQWNWASKNP+GY  PD
Sbjct: 297 RPGDAETVYAATEKAERDLSWKANYGVDEMCRDQWNWASKNPYGYGSPD 345


>tr|B7FIW1|B7FIW1_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 392

 Score = 87.8 bits (216), Expect = 3e-16
 Identities = 35/49 (71%), Positives = 42/49 (85%)
 Frame = +1

Query: 1   RPGDCSEIYASTEKAQRELQWKAVFGVDDMCRDQWNWASKNPWGYRDPD 147
           RPGD   +YAST+KA+REL+WKA +G+D MCRDQWNWASKNP+GY  PD
Sbjct: 341 RPGDAEIVYASTKKAERELKWKAKYGIDGMCRDQWNWASKNPYGYGSPD 389


>tr|A9TFR4|A9TFR4_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_144901 PE=3 SV=1
          Length = 387

 Score = 87.8 bits (216), Expect = 3e-16
 Identities = 34/46 (73%), Positives = 41/46 (89%)
 Frame = +1

Query: 1   RPGDCSEIYASTEKAQRELQWKAVFGVDDMCRDQWNWASKNPWGYR 138
           RPGDC E+YA+TEKA++EL W+A FG+ DMCRDQWNWA KNP+GYR
Sbjct: 317 RPGDCREVYAATEKAEKELGWRAKFGIADMCRDQWNWAKKNPYGYR 362


>tr|A6MD13|A6MD13_9ORYZ UDP glucose-4 epimerase OS=Oryza brachyantha
           PE=4 SV=1
          Length = 387

 Score = 87.4 bits (215), Expect = 3e-16
 Identities = 34/45 (75%), Positives = 41/45 (91%)
 Frame = +1

Query: 1   RPGDCSEIYASTEKAQRELQWKAVFGVDDMCRDQWNWASKNPWGY 135
           RPGDC+E+YASTEKA++EL W A FG++DMCRDQWNWA KNP+GY
Sbjct: 335 RPGDCTEVYASTEKAKKELGWSARFGIEDMCRDQWNWARKNPYGY 379


>tr|Q8H0B7|Q8H0B7_ORYSJ Putative UDP-glucose 4-epimerase OS=Oryza
           sativa subsp. japonica GN=OsUGE-3 PE=2 SV=1
          Length = 360

 Score = 86.7 bits (213), Expect = 6e-16
 Identities = 33/45 (73%), Positives = 41/45 (91%)
 Frame = +1

Query: 1   RPGDCSEIYASTEKAQRELQWKAVFGVDDMCRDQWNWASKNPWGY 135
           RPGDC+E+YAST+KA++EL W A FG++DMCRDQWNWA KNP+GY
Sbjct: 309 RPGDCTEVYASTDKAKKELGWSARFGIEDMCRDQWNWAKKNPYGY 353


>tr|Q652A8|Q652A8_ORYSJ Os09g0526700 protein OS=Oryza sativa subsp.
           japonica GN=OJ1439_F07.18 PE=2 SV=1
          Length = 373

 Score = 86.7 bits (213), Expect = 6e-16
 Identities = 33/45 (73%), Positives = 41/45 (91%)
 Frame = +1

Query: 1   RPGDCSEIYASTEKAQRELQWKAVFGVDDMCRDQWNWASKNPWGY 135
           RPGDC+E+YAST+KA++EL W A FG++DMCRDQWNWA KNP+GY
Sbjct: 322 RPGDCTEVYASTDKAKKELGWSARFGIEDMCRDQWNWAKKNPYGY 366


>tr|B8BDM3|B8BDM3_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_32110 PE=4 SV=1
          Length = 373

 Score = 86.7 bits (213), Expect = 6e-16
 Identities = 33/45 (73%), Positives = 41/45 (91%)
 Frame = +1

Query: 1   RPGDCSEIYASTEKAQRELQWKAVFGVDDMCRDQWNWASKNPWGY 135
           RPGDC+E+YAST+KA++EL W A FG++DMCRDQWNWA KNP+GY
Sbjct: 322 RPGDCTEVYASTDKAKKELGWSARFGIEDMCRDQWNWAKKNPYGY 366


>tr|B8BDM2|B8BDM2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_32109 PE=4 SV=1
          Length = 251

 Score = 86.7 bits (213), Expect = 6e-16
 Identities = 33/45 (73%), Positives = 41/45 (91%)
 Frame = +1

Query: 1   RPGDCSEIYASTEKAQRELQWKAVFGVDDMCRDQWNWASKNPWGY 135
           RPGDC+E+YAST+KA++EL W A FG++DMCRDQWNWA KNP+GY
Sbjct: 200 RPGDCTEVYASTDKAKKELGWSARFGIEDMCRDQWNWAKKNPYGY 244


>tr|A3C0T7|A3C0T7_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_028909 PE=3 SV=1
          Length = 408

 Score = 86.7 bits (213), Expect = 6e-16
 Identities = 33/45 (73%), Positives = 41/45 (91%)
 Frame = +1

Query: 1   RPGDCSEIYASTEKAQRELQWKAVFGVDDMCRDQWNWASKNPWGY 135
           RPGDC+E+YAST+KA++EL W A FG++DMCRDQWNWA KNP+GY
Sbjct: 357 RPGDCTEVYASTDKAKKELGWSARFGIEDMCRDQWNWAKKNPYGY 401


>tr|B7FK31|B7FK31_MEDTR Putative uncharacterized protein OS=Medicago
           truncatula PE=2 SV=1
          Length = 350

 Score = 86.3 bits (212), Expect = 8e-16
 Identities = 33/45 (73%), Positives = 40/45 (88%)
 Frame = +1

Query: 1   RPGDCSEIYASTEKAQRELQWKAVFGVDDMCRDQWNWASKNPWGY 135
           RPGD +E+YAST+KAQ+EL WKA +GV++MCRDQWNWA  NPWGY
Sbjct: 302 RPGDATEVYASTDKAQKELGWKAKYGVEEMCRDQWNWAKNNPWGY 346