| BP914655 |
| Clone id |
YMU001_000061_D09 |
| Library |
YMU01 |
| Length |
484 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000061_D09. |
| Accession |
BP914655 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL1844Contig1 |
| Sequence |
AAATTTGTTTTTGCTTCTCCACAACCATAAGAAAAATCTGTAGCCACATCTTCCTCTGCC TCCATAATGGATGTGGCCTCATCTTTCTTAATAAATCCATGCACTTGCTGCACAACAATA GGACATTCCACTCTTACTCTCATAAGCATGACCACCAATATGCGATTGCATAATGGTTTT ACGTACATATCCAAATTTCCACCCTTGATGCATCCATATGCTCCTCTTGTACATCACCAA TGACATCAACTCATCCTTCTTATTGTCATCACAAGCTGACTTCCAAAAGCTTGAACTCAA ATTATCCTCGTCCTTATCATAAGTTGACTCTGTATCGACATCTTCATCTTCCTAATTCTC TAGGAGAGTTTGCCCACCCCTTAGTCTTTCCTCATTATATTTGTCCATGTATTCATGTTC ACTTTCTTGATTCAAATCTGATATCTCCTTTTCATGTGCACACCCTTTGGCTAGGACCTC ATCC |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q54FJ7 |
| Definition |
sp|Q54FJ7|Y9094_DICDI Uncharacterized protein DDB_G0290803 OS=Dictyostelium discoideum |
| Align length |
68 |
| Score (bit) |
33.1 |
| E-value |
0.68 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
Q4YLP4 |
| Definition |
tr|Q4YLP4|Q4YLP4_PLABE Putative uncharacterized protein OS=Plasmodium berghei |
| Align length |
161 |
| Score (bit) |
43.9 |
| E-value |
0.004 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914655|Adiantum capillus-veneris mRNA, clone: YMU001_000061_D09. (484 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q4YLP4|Q4YLP4_PLABE Putative uncharacterized protein OS=Plasm... 44 0.004 tr|Q7MS71|Q7MS71_WOLSU Putative uncharacterized protein hydC OS=... 37 0.37 tr|A8NTS6|A8NTS6_BRUMA Putative uncharacterized protein OS=Brugi... 37 0.49 tr|Q17L58|Q17L58_AEDAE E1a binding protein P400 OS=Aedes aegypti... 37 0.63 tr|Q5A0E1|Q5A0E1_CANAL Putative uncharacterized protein (Putativ... 37 0.63 tr|Q4T031|Q4T031_TETNG Chromosome undetermined SCAF11373, whole ... 37 0.63 tr|Q9ET15|Q9ET15_MOUSE Retinitis pigmentosa GTPase regulator (Fr... 36 0.82 tr|Q6Y7X4|Q6Y7X4_9POAL DNA-directed RNA polymerase beta' subunit... 36 1.1 tr|A8WUY7|A8WUY7_CAEBR CBR-GON-4 protein OS=Caenorhabditis brigg... 36 1.1 tr|Q1DRY9|Q1DRY9_COCIM Putative uncharacterized protein OS=Cocci... 36 1.1 tr|A5PMP6|A5PMP6_DANRE Novel protein similar to vertebrate compl... 35 1.4 tr|B3CDT6|B3CDT6_9BACE Putative uncharacterized protein OS=Bacte... 35 1.4 tr|Q6VVE5|Q6VVE5_PLAFA Rhoptry associated membrane antigen OS=Pl... 35 1.8 tr|A0D4Q4|A0D4Q4_PARTE Chromosome undetermined scaffold_38, whol... 35 1.8 tr|A5DRY9|A5DRY9_LODEL Putative uncharacterized protein OS=Lodde... 35 1.8 tr|Q4S5A8|Q4S5A8_TETNG Chromosome 19 SCAF14731, whole genome sho... 35 2.4 tr|Q4YUJ9|Q4YUJ9_PLABE Putative uncharacterized protein OS=Plasm... 35 2.4 tr|Q4YKU8|Q4YKU8_PLABE Putative uncharacterized protein OS=Plasm... 35 2.4 tr|A2F582|A2F582_TRIVA Putative uncharacterized protein OS=Trich... 35 2.4 tr|B3NGI9|B3NGI9_DROER GG14055 OS=Drosophila erecta GN=GG14055 P... 35 2.4 tr|B5X1E4|B5X1E4_SALSA U3 small nucleolar RNA-associated protein... 34 3.1 tr|Q6Y7X6|Q6Y7X6_9POAL DNA-directed RNA polymerase beta' subunit... 34 3.1 tr|Q8IBN8|Q8IBN8_PLAF7 DEAD box helicase, putative OS=Plasmodium... 34 3.1 tr|A7UUK5|A7UUK5_ANOGA AGAP008267-PA OS=Anopheles gambiae GN=AGA... 34 3.1 tr|A7U5X0|A7U5X0_PLAFA DEAD-box helicase 10 OS=Plasmodium falcip... 34 3.1 tr|Q8IQ69|Q8IQ69_DROME CG32397 OS=Drosophila melanogaster GN=CG3... 34 3.1 tr|Q95BH0|Q95BH0_PASGE DNA-directed RNA polymerase beta' subunit... 34 4.1 tr|A5BZE3|A5BZE3_VITVI Putative uncharacterized protein OS=Vitis... 34 4.1 tr|Q8ID30|Q8ID30_PLAF7 Putative uncharacterized protein PF13_035... 34 4.1 tr|Q7RT06|Q7RT06_PLAYO Putative uncharacterized protein PY00195 ... 34 4.1
>tr|Q4YLP4|Q4YLP4_PLABE Putative uncharacterized protein OS=Plasmodium berghei GN=PB400804.00.0 PE=4 SV=1 Length = 202
Score = 43.9 bits (102), Expect = 0.004 Identities = 40/161 (24%), Positives = 61/161 (37%), Gaps = 19/161 (11%) Frame = +3
Query: 39 CSHIFLCLHNGCGLIFLNKSMHLLHNNRTF-------HSYSHKHDHQYAIA*WFYVHIQI 197 C++++ N C + MH + T+ HS H H H AI ++HI I Sbjct: 41 CAYVYT---NSCTCTYTFIHMHTYTHEHTYTYLCTCMHSPMHMHTHTCAIHVHTHIHIHI 97
Query: 198 STLDASICSSCTSPM---------TSTHPSYCHHKLTSKSLNSNYPRPYHKLTLYRHLH- 347 C+ +PM TH H T K +N + P HK +++ H H Sbjct: 98 HQ-----CTCIHTPMHMHAQTCAHACTHTHVHAHAYTYKHMNIHMPMYMHKQSMHMHKHT 152
Query: 348 --LPNSLGEFAHPLVFPHYICPCIHVHFLDSNLISPFHVHT 464 + A ++ H C CIH +P HVH+ Sbjct: 153 CAMHAYTCTHASTCIYTH-PCTCIH---------TPVHVHS 183
>tr|Q7MS71|Q7MS71_WOLSU Putative uncharacterized protein hydC OS=Wolinella succinogenes GN=hydC PE=4 SV=1 Length = 380
Score = 37.4 bits (85), Expect = 0.37 Identities = 21/66 (31%), Positives = 30/66 (45%) Frame = +3
Query: 252 HPSYCHHKLTSKSLNSNYPRPYHKLTLYRHLHLPNSLGEFAHPLVFPHYICPCIHVHFLD 431 HPSY H +T +L S R +++ R LH F HP + C H+HF D Sbjct: 298 HPSYFPHAITRSNLQSQKYR-LSRISFIRELHAKIPPKLFEHPAIKTRSNCQACHLHF-D 355
Query: 432 SNLISP 449 ++ P Sbjct: 356 EGILQP 361
>tr|A8NTS6|A8NTS6_BRUMA Putative uncharacterized protein OS=Brugia malayi GN=Bm1_09695 PE=4 SV=1 Length = 274
Score = 37.0 bits (84), Expect = 0.49 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 1/63 (1%) Frame = +3
Query: 87 LNKSMHLLHNNRTFHSY-SHKHDHQYAIA*WFYVHIQISTLDASICSSCTSPMTSTHPSY 263 L+ S+H H+ R H Y H H H + I + I TL +S +S +S + S P Y Sbjct: 16 LSSSLHHYHHQRYHHFYHRHHHQHHHII---IIITTIIITLSSSSSASLSSLLPSLSPHY 72
Query: 264 CHH 272 HH Sbjct: 73 HHH 75
Score = 37.0 bits (84), Expect = 0.49 Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 10/96 (10%) Frame = +3
Query: 87 LNKSMHLLHNNRTFHSYSHKHDHQYAIA*WFYVHIQ-------ISTLDAS---ICSSCTS 236 L+ H H++ +H + H H H Y I + I I+TL +S + SS +S Sbjct: 68 LSPHYHHHHHHHCYHHHHHHHHHHYIIIIIIIITIVIIIVIIIITTLSSSSSLLSSSSSS 127
Query: 237 PMTSTHPSYCHHKLTSKSLNSNYPRPYHKLTLYRHL 344 P +S H Y HH ++ R +H Y H+ Sbjct: 128 PPSSLHYHYHHH---------HHHRYHHCYHHYHHI 154
>tr|Q17L58|Q17L58_AEDAE E1a binding protein P400 OS=Aedes aegypti GN=AAEL001440 PE=4 SV=1 Length = 3081
Score = 36.6 bits (83), Expect = 0.63 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 6/75 (8%) Frame = -2
Query: 456 HEKEISDLNQESE---HEYMDKYNEERLRGG---QTLLEN*EDEDVDTESTYDKDEDNLS 295 H+KEI +LN E+E E M KYN G + + + +DE ++E+ D E+ +S Sbjct: 737 HKKEIDELNAENEMSIEELMAKYNRPPPPGRRLEEKMDVDSDDEQSESEAESDSSEEQVS 796
Query: 294 SSFWKSACDDNKKDE 250 SS D KDE Sbjct: 797 SSDEDMDGDQGDKDE 811
>tr|Q5A0E1|Q5A0E1_CANAL Putative uncharacterized protein (Putative uncharacterized protein CaJ7.0484) OS=Candida albicans GN=CaJ7.0484 PE=4 SV=1 Length = 552
Score = 36.6 bits (83), Expect = 0.63 Identities = 29/114 (25%), Positives = 46/114 (40%) Frame = -2
Query: 483 DEVLAKGCAHEKEISDLNQESEHEYMDKYNEERLRGGQTLLEN*EDEDVDTESTYDKDED 304 +E+ KG E +I DL E D NEE G +D ++D ++ ED Sbjct: 51 EEIDEKGSEKESDIEDLQDEDLFFIDDGNNEEHSSG--------DDMEIDQSEDEEEGED 102
Query: 303 NLSSSFWKSACDDNKKDELMSLVMYKRSIWMHQGWKFGYVRKTIMQSHIGGHAY 142 S + W+ + D+ L++ K+ +RKT S I G +Y Sbjct: 103 QDSDNAWEDSDDEKVNISLLTSDKLKK------------LRKTPQDSVISGKSY 144
>tr|Q4T031|Q4T031_TETNG Chromosome undetermined SCAF11373, whole genome shotgun sequence. (Fragment) OS=Tetraodon nigroviridis GN=GSTENG00009544001 PE=4 SV=1 Length = 2172
Score = 36.6 bits (83), Expect = 0.63 Identities = 36/143 (25%), Positives = 52/143 (36%) Frame = +3
Query: 39 CSHIFLCLHNGCGLIFLNKSMHLLHNNRTFHSYSHKHDHQYAIA*WFYVHIQISTLDASI 218 C H+ LH + L+ +H LH + H H ++H L Sbjct: 1653 CGHLLHLLHP----LHLHHLLHPLHLHHLLHPLHLLHP--------LHLHHLHHLLHPLH 1700
Query: 219 CSSCTSPMTSTHPSYCHHKLTSKSLNSNYPRPYHKLTLYRHLHLPNSLGEFAHPLVFPHY 398 P+ HP Y HH L H L L LHL H L+ P + Sbjct: 1701 LLHPLHPLHLLHPLYLHHLL-------------HPLHLLHPLHL--------HHLLHPLH 1739
Query: 399 ICPCIHVHFLDSNLISPFHVHTL 467 + +H+H L +L+ P H+H L Sbjct: 1740 LLHPLHLHHL-HHLLHPLHLHHL 1761
>tr|Q9ET15|Q9ET15_MOUSE Retinitis pigmentosa GTPase regulator (Fragment) OS=Mus musculus GN=Rpgr PE=4 SV=1 Length = 538
Score = 36.2 bits (82), Expect = 0.82 Identities = 26/94 (27%), Positives = 44/94 (46%) Frame = -2
Query: 453 EKEISDLNQESEHEYMDKYNEERLRGGQTLLEN*EDEDVDTESTYDKDEDNLSSSFWKSA 274 EK+ D+ +E E E + +ER R E +DV+ + TYD++E + K A Sbjct: 408 EKKKGDITEEEEEEEEGQEGDEREREEHGSCE----DDVEEDKTYDREEGEYKKAIGKVA 463
Query: 273 CDDNKKDELMSLVMYKRSIWMHQGWKFGYVRKTI 172 +++++D S + K + M G Y K I Sbjct: 464 DNESQEDRKQSPKVSKINGSMKYGRHGTYSEKPI 497
>tr|Q6Y7X4|Q6Y7X4_9POAL DNA-directed RNA polymerase beta' subunit 2 (Fragment) OS=Setaria sphacelata GN=rpoC2 PE=4 SV=1 Length = 134
Score = 35.8 bits (81), Expect = 1.1 Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 10/94 (10%) Frame = -2
Query: 453 EKEISDLNQESEHEYMDKYNEERLRGGQTLLEN*EDE----DVDTESTYDKDEDNLSSSF 286 E+E L ++SE EY NE + R G+ E ED+ + D+E Y EDN + Sbjct: 40 EEEYRTLEKDSEEEYGSPENEYKTREGEGKYEILEDKYRTLEEDSEEEYGSSEDNSEKEY 99
Query: 285 --WKSACDDNKKDELMS----LVMYKRSIWMHQG 202 + +++ +DE S ++ K S H+G Sbjct: 100 GTLEEDSEEDSEDEYGSSEEDSILKKESFIEHRG 133
>tr|A8WUY7|A8WUY7_CAEBR CBR-GON-4 protein OS=Caenorhabditis briggsae GN=Cbr-gon-4 PE=4 SV=2 Length = 1350
Score = 35.8 bits (81), Expect = 1.1 Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 2/69 (2%) Frame = -2
Query: 450 KEISDLNQESEHEYMDKYNEER--LRGGQTLLEN*EDEDVDTESTYDKDEDNLSSSFWKS 277 K DL E + EY D Y EER R E EDE++D E ++D+D + Sbjct: 122 KNFLDLEYEEDDEYDDDYVEERDCSRQNDGEAEESEDEELDEEEE-EEDDDEDEEESKEV 180
Query: 276 ACDDNKKDE 250 DDN+K E Sbjct: 181 DKDDNEKQE 189
>tr|Q1DRY9|Q1DRY9_COCIM Putative uncharacterized protein OS=Coccidioides immitis GN=CIMG_06924 PE=4 SV=1 Length = 1090
Score = 35.8 bits (81), Expect = 1.1 Identities = 21/69 (30%), Positives = 40/69 (57%), Gaps = 8/69 (11%) Frame = -2
Query: 483 DEVLAKGCA---HEKEISDLNQESEHEYMDKY-----NEERLRGGQTLLEN*EDEDVDTE 328 D VL+ G + H+ EI +++ +S+ E DK ++E + G E+ E+++++ E Sbjct: 13 DSVLSNGSSMIPHDAEIIEIDDDSDGEVQDKEVPMNEDDEEISEGD---EDDEEDEMEEE 69
Query: 327 STYDKDEDN 301 YD+DED+ Sbjct: 70 EDYDEDEDH 78
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