BP914660
Clone id YMU001_000061_E02
Library
Length 479
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000061_E02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AAATCAACTTTTACTACCAGTGGCAAAATCGCACGGATTTACACAGCAATGAATGGGCAC
CAATCATGCCTGGCAAAAGGCGTATTACAATCTACAAAAGGGTATTTAAGCACCATGGTT
AAAGTGGAACAAGTCTTTAGACGTTTCCAAGGTTGGGTACTTCATGCCCAACCCAACAAA
TAAAGTCTGTCGTGTTTCATATAAGTGCAGTCTACAGGTGTAGATGGAAAATTGTGGGCA
AAATACTTGCCATCGATCTATCCTTCCTGTAGATGCGACAAAACAAACCCCTACAATGCC
AACCCTAGACAGAGAAGCCTAGACAATGATAAGCCCATACATAATACATGGCCTCTAAGG
CATGCAGGTCTGTATACCTTAGAAATCGGATGATCCTTCATTAGAGTTAATATAAGAGTG
AATAATTGGGGCCAGCCGTCCAATCGATGCATAGAAACAACAGCTCTTACTCCTGCGCT
■■Homology search results ■■ -
sp_hit_id O80899
Definition sp|O80899|CSLB2_ARATH Cellulose synthase-like protein B2 OS=Arabidopsis thaliana
Align length 49
Score (bit) 31.6
E-value 1.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914660|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_E02.
(479 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|O80899|CSLB2_ARATH Cellulose synthase-like protein B2 OS=Arab... 32 1.9
sp|O15439|MRP4_HUMAN Multidrug resistance-associated protein 4 O... 30 5.6
sp|A5IIQ6|ENO_THEP1 Enolase OS=Thermotoga petrophila (strain RKU... 29 9.6
sp|P42848|ENO_THEMA Enolase OS=Thermotoga maritima GN=eno PE=1 SV=2 29 9.6
sp|P06188|ARAB_SALTY Ribulokinase OS=Salmonella typhimurium GN=a... 29 9.6
sp|A9MYN9|ARAB_SALPB Ribulokinase OS=Salmonella paratyphi B (str... 29 9.6

>sp|O80899|CSLB2_ARATH Cellulose synthase-like protein B2
OS=Arabidopsis thaliana GN=CSLB2 PE=2 SV=1
Length = 757

Score = 31.6 bits (70), Expect = 1.9
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = -2

Query: 367 LHALEAMYYVWAYHCLGFSV*GWHCRGLFCRIYRKDRSMASILPTIFHL 221
L + +Y +W + CLG S+ W+ F RI + SI I L
Sbjct: 576 LAGMHCLYTLWEFMCLGHSIQSWYVSQSFWRIVATSSWLFSIFDIILKL 624


>sp|O15439|MRP4_HUMAN Multidrug resistance-associated protein 4
OS=Homo sapiens GN=ABCC4 PE=1 SV=3
Length = 1325

Score = 30.0 bits (66), Expect = 5.6
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -1

Query: 473 GVRAVVSMHRLDGWPQLFTLILTLMKDHPISKVYRPACLRG 351
G+R + ++ W + F+ ++T ++ ISK+ R +CLRG
Sbjct: 282 GIRII----KMYAWEKSFSNLITNLRKKEISKILRSSCLRG 318


>sp|A5IIQ6|ENO_THEP1 Enolase OS=Thermotoga petrophila (strain RKU-1
/ ATCC BAA-488 / DSM 13995) GN=eno PE=3 SV=1
Length = 429

Score = 29.3 bits (64), Expect = 9.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1

Query: 116 MVLKYPFVDCNTPFARHDWCPFI 48
+V KYP + PFA DW F+
Sbjct: 276 LVAKYPIISIEDPFAEEDWDAFV 298


>sp|P42848|ENO_THEMA Enolase OS=Thermotoga maritima GN=eno PE=1 SV=2
Length = 429

Score = 29.3 bits (64), Expect = 9.6
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1

Query: 116 MVLKYPFVDCNTPFARHDWCPFI 48
+V KYP + PFA DW F+
Sbjct: 276 LVAKYPIISIEDPFAEEDWDAFV 298


>sp|P06188|ARAB_SALTY Ribulokinase OS=Salmonella typhimurium GN=araB
PE=3 SV=3
Length = 569

Score = 29.3 bits (64), Expect = 9.6
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +1

Query: 31 ARIYTAMNGHQSCLAKGVLQSTKGYLSTMVKVEQVFRRFQGWVLHAQ 171
A+++ + Q +A V ++ + + + EQ++RR+Q W L A+
Sbjct: 501 AKVHADIPAAQQSMASAVERTLRPHPEQAQRFEQLYRRYQQWALSAE 547


>sp|A9MYN9|ARAB_SALPB Ribulokinase OS=Salmonella paratyphi B (strain
ATCC BAA-1250 / SPB7) GN=araB PE=3 SV=1
Length = 569

Score = 29.3 bits (64), Expect = 9.6
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +1

Query: 31 ARIYTAMNGHQSCLAKGVLQSTKGYLSTMVKVEQVFRRFQGWVLHAQ 171
A+++ + Q +A V ++ + + + EQ++RR+Q W L A+
Sbjct: 501 AKVHADIPAAQQSMASAVERTLRPHPEQAQRFEQLYRRYQQWALSAE 547


tr_hit_id Q6C5M7
Definition tr|Q6C5M7|Q6C5M7_YARLI YALI0E16731p OS=Yarrowia lipolytica
Align length 35
Score (bit) 32.7
E-value 9.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914660|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_E02.
(479 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6C5M7|Q6C5M7_YARLI YALI0E16731p OS=Yarrowia lipolytica GN=YA... 33 9.2

>tr|Q6C5M7|Q6C5M7_YARLI YALI0E16731p OS=Yarrowia lipolytica
GN=YALI0E16731g PE=4 SV=1
Length = 1214

Score = 32.7 bits (73), Expect = 9.2
Identities = 17/35 (48%), Positives = 22/35 (62%)
Frame = +3

Query: 159 TSCPTQQIKSVVFHISAVYRCRWKIVGKILAIDLS 263
T PT+ I VVF +AV+R K GK+L +DLS
Sbjct: 37 TLTPTKHIDKVVFGSNAVWRAYAKSHGKVLLVDLS 71