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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914664
Clone id YMU001_000061_E06
Library
Length 511
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000061_E06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
ACAAGATGTACCGTGTCAGGCACAGTGAAAGAGAGTTGACAAGATCAAGCAATTATACGA
TGACAACCCCTTTGTAATCTTGTGTTAATGTAGGTGGATTTACGTTATTGATGGTTTCTT
TGCGCTAATGGGTAATTCTTGTTTGGAATGAATGTAGAGATATTGATGGTAGCTTCATGT
CCATGGAGATTTGTTTCTCAAAATGAATGAGAGATGCCTCCAAAGTCTGTAAAGCTGCCA
TTTCCTTGAAAGGAAATCGCGTTCATGGTGGATGACATTGTCGATACAAGGATAGGCACC
CGCCACATTGGTTTACTTCAAACAGATGTTTGCATTTGCATGGCCGTCAAATGAATTTGA
AGCTGATGTTATGAACGATTGGCACCAACTCAATGTGGCTGCTTGCAAAAGACTTTAATG
GCTGAGAATAAATGATTTATTTATGAGTAGCCTGGTCACTTTAATGCAGATTGTTCACAA
AAGAAAAGGCCAACTGACTAGAGGACAAGAA
■■Homology search results ■■ -
sp_hit_id Q9CHN1
Definition sp|Q9CHN1|GLGC_LACLA Glucose-1-phosphate adenylyltransferase OS=Lactococcus lactis subsp. lactis
Align length 89
Score (bit) 29.6
E-value 8.6
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914664|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_E06.
         (511 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9CHN1|GLGC_LACLA Glucose-1-phosphate adenylyltransferase OS=...    30   8.6  
sp|Q6MER8|EFG_PARUW Elongation factor G OS=Protochlamydia amoebo...    30   8.6  

>sp|Q9CHN1|GLGC_LACLA Glucose-1-phosphate adenylyltransferase
           OS=Lactococcus lactis subsp. lactis GN=glgC PE=3 SV=1
          Length = 380

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 24/89 (26%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
 Frame = -3

Query: 389 VGANRS*HQLQIHLTAMQMQTSV*SKPMWRV--------PILVSTMSSTMNAISFQGNGS 234
           VG   S HQ  +    +  + ++  K  WR+        P  ++  S+  NA+   G+G 
Sbjct: 245 VGTIDSLHQSSMEFLDLNNELNITDKS-WRIYSHNDISAPQFITEKSNVKNALV--GDGC 301

Query: 233 FTDFGGISHSF*ETNLHGHEATINISTFI 147
           + D G + HS    N+H  E T+   +FI
Sbjct: 302 YVD-GTVLHSILSQNVHVQEGTVIEDSFI 329


>sp|Q6MER8|EFG_PARUW Elongation factor G OS=Protochlamydia
           amoebophila (strain UWE25) GN=fusA PE=3 SV=1
          Length = 695

 Score = 29.6 bits (65), Expect = 8.6
 Identities = 16/51 (31%), Positives = 29/51 (56%)
 Frame = +3

Query: 90  VGGFTLLMVSLR*WVILVWNECRDIDGSFMSMEICFSK*MRDASKVCKAAI 242
           + GF L+ V     V +V+    D+D + M+ +IC S  +++A++ CK  I
Sbjct: 560 LAGFNLVDVL----VDIVFGSYHDVDSNEMAFKICGSMALKEAARKCKPVI 606
tr_hit_id Q2PG75
Definition tr|Q2PG75|Q2PG75_XENLA Xnr5-9 OS=Xenopus laevis
Align length 66
Score (bit) 34.7
E-value 2.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914664|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_E06.
         (511 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q2PG75|Q2PG75_XENLA Xnr5-9 OS=Xenopus laevis GN=Xnr5-9 PE=2 SV=1    35   2.8  
tr|Q2PG66|Q2PG66_XENLA Xnr5-2 OS=Xenopus laevis GN=nodal5.1 PE=2...    35   2.8  
tr|B7ZQI8|B7ZQI8_XENLA Xnr5-9 protein OS=Xenopus laevis GN=xnr5-...    35   2.8  
tr|B7ZQI6|B7ZQI6_XENLA Xnr5-9 protein OS=Xenopus laevis GN=xnr5-...    35   2.8  
tr|B2DMR6|B2DMR6_STRPN Replication protein OS=Streptococcus pneu...    35   2.8  
tr|A5MWM1|A5MWM1_STRPN Phage protein OS=Streptococcus pneumoniae...    35   2.8  
tr|A5LUF3|A5LUF3_STRPN Phage protein OS=Streptococcus pneumoniae...    35   2.8  
tr|A5LQ31|A5LQ31_STRPN Phage protein OS=Streptococcus pneumoniae...    35   2.8  

>tr|Q2PG75|Q2PG75_XENLA Xnr5-9 OS=Xenopus laevis GN=Xnr5-9 PE=2 SV=1
          Length = 384

 Score = 34.7 bits (78), Expect = 2.8
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = -1

Query: 274 HPP*TRFPFKEMAALQTLEASLIHFEKQISMDMKLPSISLHSFQTRITH*RKETINNVNP 95
           H    RFP +     Q L+ASL+H  K++  DMK P   +H +Q  ++   K+      P
Sbjct: 24  HSKEVRFPLQGFT--QRLKASLVHHGKRLPHDMKYPVYMMHMYQNLMSGKFKDLSIQGEP 81

Query: 94  PTLTQD 77
             L  D
Sbjct: 82  ALLESD 87


>tr|Q2PG66|Q2PG66_XENLA Xnr5-2 OS=Xenopus laevis GN=nodal5.1 PE=2
           SV=1
          Length = 384

 Score = 34.7 bits (78), Expect = 2.8
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = -1

Query: 274 HPP*TRFPFKEMAALQTLEASLIHFEKQISMDMKLPSISLHSFQTRITH*RKETINNVNP 95
           H    RFP +     Q L+ASL+H  K++  DMK P   +H +Q  ++   K+      P
Sbjct: 24  HSKEVRFPLQGFT--QRLKASLVHHGKRLPHDMKYPVYMMHMYQNLMSGKFKDLSIQGEP 81

Query: 94  PTLTQD 77
             L  D
Sbjct: 82  ALLESD 87


>tr|B7ZQI8|B7ZQI8_XENLA Xnr5-9 protein OS=Xenopus laevis GN=xnr5-9
           PE=2 SV=1
          Length = 384

 Score = 34.7 bits (78), Expect = 2.8
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = -1

Query: 274 HPP*TRFPFKEMAALQTLEASLIHFEKQISMDMKLPSISLHSFQTRITH*RKETINNVNP 95
           H    RFP +     Q L+ASL+H  K++  DMK P   +H +Q  ++   K+      P
Sbjct: 24  HSKEVRFPLQGFT--QRLKASLVHHGKRLPHDMKYPVYMMHMYQNLMSGKFKDLSIQGEP 81

Query: 94  PTLTQD 77
             L  D
Sbjct: 82  ALLESD 87


>tr|B7ZQI6|B7ZQI6_XENLA Xnr5-9 protein OS=Xenopus laevis GN=xnr5-9
           PE=2 SV=1
          Length = 384

 Score = 34.7 bits (78), Expect = 2.8
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = -1

Query: 274 HPP*TRFPFKEMAALQTLEASLIHFEKQISMDMKLPSISLHSFQTRITH*RKETINNVNP 95
           H    RFP +     Q L+ASL+H  K++  DMK P   +H +Q  ++   K+      P
Sbjct: 24  HSKEVRFPLQGFT--QRLKASLVHHGKRLPHDMKYPVYMMHMYQNLMSGKFKDLSIQGEP 81

Query: 94  PTLTQD 77
             L  D
Sbjct: 82  ALLESD 87


>tr|B2DMR6|B2DMR6_STRPN Replication protein OS=Streptococcus
           pneumoniae SP195 GN=SP195_1528 PE=4 SV=1
          Length = 273

 Score = 34.7 bits (78), Expect = 2.8
 Identities = 23/78 (29%), Positives = 39/78 (50%)
 Frame = -2

Query: 357 NSFDGHANANICLK*TNVAGAYPCIDNVIHHERDFLSRKWQLYRLWRHLSFILRNKSPWT 178
           N +DG+ NANI LK TN          VI  ++   S  ++  + W+HL+ I       T
Sbjct: 45  NFWDGYPNANIALKITNFF--------VIDIDKHGKSNGFESLKKWKHLNLIEPTLQAKT 96

Query: 177 *SYHQYLYIHSKQELPIS 124
            S  ++L+   +++ PI+
Sbjct: 97  ASGGKHLFYFKREDEPIT 114


>tr|A5MWM1|A5MWM1_STRPN Phage protein OS=Streptococcus pneumoniae
           SP23-BS72 GN=CGSSp23BS72_07531 PE=4 SV=1
          Length = 273

 Score = 34.7 bits (78), Expect = 2.8
 Identities = 23/78 (29%), Positives = 39/78 (50%)
 Frame = -2

Query: 357 NSFDGHANANICLK*TNVAGAYPCIDNVIHHERDFLSRKWQLYRLWRHLSFILRNKSPWT 178
           N +DG+ NANI LK TN          VI  ++   S  ++  + W+HL+ I       T
Sbjct: 45  NFWDGYPNANIALKTTNFF--------VIDIDKHGKSNGFESLKKWKHLNLIEPTLQAKT 96

Query: 177 *SYHQYLYIHSKQELPIS 124
            S  ++L+   +++ PI+
Sbjct: 97  ASGGKHLFYFKREDEPIT 114


>tr|A5LUF3|A5LUF3_STRPN Phage protein OS=Streptococcus pneumoniae
           SP9-BS68 GN=CGSSp9BS68_09327 PE=4 SV=1
          Length = 270

 Score = 34.7 bits (78), Expect = 2.8
 Identities = 23/78 (29%), Positives = 39/78 (50%)
 Frame = -2

Query: 357 NSFDGHANANICLK*TNVAGAYPCIDNVIHHERDFLSRKWQLYRLWRHLSFILRNKSPWT 178
           N +DG+ NANI LK TN          VI  ++   S  ++  + W+HL+ I       T
Sbjct: 42  NFWDGYPNANIALKITNFF--------VIDIDKHGKSNGFESLKKWKHLNLIEPTLQAKT 93

Query: 177 *SYHQYLYIHSKQELPIS 124
            S  ++L+   +++ PI+
Sbjct: 94  ASGGKHLFYFKREDEPIT 111


>tr|A5LQ31|A5LQ31_STRPN Phage protein OS=Streptococcus pneumoniae
           SP6-BS73 GN=CGSSp6BS73_08244 PE=4 SV=1
          Length = 270

 Score = 34.7 bits (78), Expect = 2.8
 Identities = 23/78 (29%), Positives = 39/78 (50%)
 Frame = -2

Query: 357 NSFDGHANANICLK*TNVAGAYPCIDNVIHHERDFLSRKWQLYRLWRHLSFILRNKSPWT 178
           N +DG+ NANI LK TN          VI  ++   S  ++  + W+HL+ I       T
Sbjct: 42  NFWDGYPNANIALKTTNFF--------VIDIDKHGKSNGFESLKKWKHLNLIEPTLQAKT 93

Query: 177 *SYHQYLYIHSKQELPIS 124
            S  ++L+   +++ PI+
Sbjct: 94  ASGGKHLFYFKREDEPIT 111