BP914667
Clone id YMU001_000061_E09
Library
Length 510
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000061_E09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTTTTTTTTTTTCCTGCCAATAGAAAGACTTTGATCTGTAAAAACAGGATGGTTCTA
CAAAACCTTGAAAATGACATGCCTCTGAAGAGTACAAAACTACAAGAAGTTTTGCTGATT
GTATCAAAACCCTCTAAGCCAAGAATGAATTGCCTCGTAAATTCCCCGGACATGGCCCTG
TGATGAAGTCTCTTGAAGACCTCTCAGCTTGTGTTGGCCATGCCCATTAAAATGCAGTTG
TTTTCATCCAACTGTGGATACCCAAACCAAAGAAAGACAAACATATTACCCCTCAACTTT
TGTTTGTACCATCTCATTCGCCCACAGAAAGATGGTCCTACAAAACTCACTGCATTGCCA
TGACCCTCTGTTGAGTGCTATTTGCGATCACTCCGCCACTTTTCCCAGAATTGGTGTCGT
CATTCATCCTCGAGTGTAGAACCGGTTCATGCAGGGTACGGGTAGAATCTCCTTGAACAA
TTGCTGCATGGCAGTAACCTCCTTGATCCA
■■Homology search results ■■ -
sp_hit_id Q91690
Definition sp|Q91690|GLI1_XENLA Zinc finger protein GLI1 (Fragment) OS=Xenopus laevis
Align length 42
Score (bit) 31.6
E-value 2.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914667|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_E09.
(495 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q91690|GLI1_XENLA Zinc finger protein GLI1 (Fragment) OS=Xeno... 32 2.1
sp|P40363|SFGH_YEAST S-formylglutathione hydrolase OS=Saccharomy... 31 3.6
sp|P10124|SRGN_HUMAN Serglycin OS=Homo sapiens GN=SRGN PE=1 SV=2 30 6.1
sp|P91682|SMO_DROME Protein smoothened OS=Drosophila melanogaste... 30 7.9
sp|P37201|NCPR_CANTR NADPH--cytochrome P450 reductase OS=Candida... 30 7.9
sp|O65399|E131_ARATH Putative glucan endo-1,3-beta-glucosidase 1... 30 8.0

>sp|Q91690|GLI1_XENLA Zinc finger protein GLI1 (Fragment) OS=Xenopus
laevis GN=gli1 PE=2 SV=2
Length = 1360

Score = 31.6 bits (70), Expect = 2.1
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = -1

Query: 234 G*KQLHFNGHGQHKLR---GLQETSSQGHVRGIYEAIHSWLR 118
G ++H + G HKL L +TS GH G Y A HS+L+
Sbjct: 1227 GQMEMHQSKPGVHKLTTPLNLNQTSCDGHQHGQYNASHSFLK 1268


>sp|P40363|SFGH_YEAST S-formylglutathione hydrolase OS=Saccharomyces
cerevisiae GN=YJL068C PE=1 SV=1
Length = 299

Score = 30.8 bits (68), Expect = 3.6
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -1

Query: 219 HFNGHGQHKLRGLQETSSQGHVRGIYEAIHSWLRGF 112
HFN +G KL L + GH G Y AI +L+G+
Sbjct: 140 HFNKNGDVKLDFLDNVAITGHSMGGYGAICGYLKGY 175


>sp|P10124|SRGN_HUMAN Serglycin OS=Homo sapiens GN=SRGN PE=1 SV=2
Length = 158

Score = 30.0 bits (66), Expect = 6.1
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +1

Query: 175 LLKTSQLVLAMPIKMQLFSSNCGYPNQR 258
LLK S+LVLA+ + + L SS GYP QR
Sbjct: 5 LLKCSRLVLALALILVLESSVQGYPTQR 32


>sp|P91682|SMO_DROME Protein smoothened OS=Drosophila melanogaster
GN=smo PE=1 SV=1
Length = 1036

Score = 29.6 bits (65), Expect = 7.9
Identities = 17/69 (24%), Positives = 28/69 (40%), Gaps = 7/69 (10%)
Frame = +2

Query: 197 CWPC--PLKCSCFHPTVDTQTKERQTYYPSTFVCTISFAHRKMVLQNS-----LHCHDPL 355
CW P C+ F P + E Y PS +C I+ +++ + L C++ L
Sbjct: 139 CWAAIQPFLCAVFKPKCEKINGEDMVYLPSYEMCRITMEPCRILYNTTFFPKFLRCNETL 198

Query: 356 LSAICDHSA 382
C + A
Sbjct: 199 FPTKCTNGA 207


>sp|P37201|NCPR_CANTR NADPH--cytochrome P450 reductase OS=Candida
tropicalis GN=NCP1 PE=3 SV=1
Length = 680

Score = 29.6 bits (65), Expect = 7.9
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2

Query: 170 HHRAMSGEFTRQFILGLEGFDTISKTSCSFVLFRG 66
HH +SG +RQF L + GF +T SF G
Sbjct: 358 HHLEISGPVSRQFFLSIAGFAPDEETKKSFTRIGG 392


>sp|O65399|E131_ARATH Putative glucan endo-1,3-beta-glucosidase 1
OS=Arabidopsis thaliana GN=At1g11820/At1g11830 PE=1 SV=2
Length = 402

Score = 29.6 bits (65), Expect = 8.0
Identities = 23/96 (23%), Positives = 41/96 (42%)
Frame = +1

Query: 31 NRMVLQNLENDMPLKSTKLQEVLLIVSKPSKPRMNCLVNSPDMAL**SLLKTSQLVLAMP 210
N +V NL + + + ++L PS+ N +S + L L KT P
Sbjct: 49 NALVASNLHTQIKVSTPHAASIMLDTFPPSQAYFNQTWHSIMVPLLQFLSKTGS-----P 103

Query: 211 IKMQLFSSNCGYPNQRKTNILPLNFCLYHLIRPQKD 318
+ M L+ Y + ++PL+ CL+ + P K+
Sbjct: 104 LMMNLYPY---YVYMQNKGVVPLDNCLFEPLTPSKE 136


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914667|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_E09.
(495 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******