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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914670
Clone id YMU001_000061_E12
Library
Length 535
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000061_E12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
CAAGAAAAGGCACTCTTGGTAGAGGTAAGGAAACTGCTGGAGGCGGGATCATCGGCAGAT
GAAACCACTAGCGAATCTTCCAGTTCTGAGGAGGAGACCACATCCATCGACGAAAGTGAC
AGTTCCATTGATGTGATGGGTATCATTATGAAGGATCCACAAAGGGTAAGCACAACTGGT
GATCCATCACCAAAAGGGAAACCCAATGAAGAGGAGAGAAAATCACCTGGCCTAGGAGGA
AGTAGGTTGAAGGGTATGTTGTCTACGGCATTAACACTTGAGGAGAAAGATAGTTTATCG
GCAAATGTTGATGGGATTTCCTAACCTGTTCATTGACAACTATGAAAGAATCACAGGCAT
TACAGTGGTGGAACATCATATTAGGCTGAACGAAGGGGTAAAACCAGTTGTGCAAAAGCT
ACGACGATTGGGGTCATACAAGAAAAGGCACTCTTGGTAGAGGTAAGGAAACTGCTGGAG
GCGGGATTCATCTATCCTGTAGAAAACTCAGAATGGGTGTCACCCGTAGTGGTGA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914670|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_E12.
         (535 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done

 ***** No hits found ******
tr_hit_id A5B436
Definition tr|A5B436|A5B436_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 31
Score (bit) 40.4
E-value 0.0002
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914670|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_E12.
         (535 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5B436|A5B436_VITVI Putative uncharacterized protein OS=Vitis...    40   2e-04
tr|A5BVC0|A5BVC0_VITVI Putative uncharacterized protein OS=Vitis...    41   3e-04
tr|A5AK31|A5AK31_VITVI Putative uncharacterized protein OS=Vitis...    40   6e-04
tr|A5AH70|A5AH70_VITVI Putative uncharacterized protein OS=Vitis...    38   7e-04
tr|A5C0G4|A5C0G4_VITVI Putative uncharacterized protein OS=Vitis...    40   7e-04
tr|A5AI38|A5AI38_VITVI Putative uncharacterized protein OS=Vitis...    40   7e-04
tr|A5BWH5|A5BWH5_VITVI Putative uncharacterized protein OS=Vitis...    40   0.001
tr|A5C9C9|A5C9C9_VITVI Putative uncharacterized protein OS=Vitis...    37   0.001
tr|A5AWD1|A5AWD1_VITVI Putative uncharacterized protein OS=Vitis...    38   0.001
tr|A5BP84|A5BP84_VITVI Putative uncharacterized protein OS=Vitis...    39   0.001
tr|A5AIX4|A5AIX4_VITVI Putative uncharacterized protein OS=Vitis...    38   0.001
tr|A5C086|A5C086_VITVI Putative uncharacterized protein OS=Vitis...    38   0.001
tr|A5B5X2|A5B5X2_VITVI Putative uncharacterized protein OS=Vitis...    38   0.001
tr|A5BMP4|A5BMP4_VITVI Putative uncharacterized protein OS=Vitis...    38   0.001
tr|A5BXG2|A5BXG2_VITVI Putative uncharacterized protein OS=Vitis...    40   0.001
tr|A5B653|A5B653_VITVI Putative uncharacterized protein OS=Vitis...    38   0.001
tr|A5BL63|A5BL63_VITVI Putative uncharacterized protein OS=Vitis...    39   0.001
tr|A5B854|A5B854_VITVI Putative uncharacterized protein OS=Vitis...    38   0.001
tr|A5C084|A5C084_VITVI Putative uncharacterized protein OS=Vitis...    38   0.001
tr|A5AYI6|A5AYI6_VITVI Putative uncharacterized protein OS=Vitis...    37   0.002
tr|A5AL37|A5AL37_VITVI Putative uncharacterized protein OS=Vitis...    38   0.002
tr|A5AUV9|A5AUV9_VITVI Putative uncharacterized protein OS=Vitis...    38   0.002
tr|A5BXP9|A5BXP9_VITVI Putative uncharacterized protein OS=Vitis...    38   0.002
tr|A5ATS9|A5ATS9_VITVI Putative uncharacterized protein OS=Vitis...    39   0.002
tr|A5BNU2|A5BNU2_VITVI Putative uncharacterized protein OS=Vitis...    40   0.002
tr|A5B295|A5B295_VITVI Putative uncharacterized protein OS=Vitis...    39   0.002
tr|A7QRS4|A7QRS4_VITVI Chromosome chr13 scaffold_152, whole geno...    38   0.002
tr|A5C277|A5C277_VITVI Putative uncharacterized protein OS=Vitis...    38   0.002
tr|A5ADC2|A5ADC2_VITVI Putative uncharacterized protein OS=Vitis...    37   0.002
tr|A5BW26|A5BW26_VITVI Putative uncharacterized protein OS=Vitis...    37   0.002

>tr|A5B436|A5B436_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_016516 PE=4 SV=1
          Length = 1656

 Score = 40.4 bits (93), Expect(2) = 2e-04
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +1

Query: 442 EKALLVEVRKLLEAGFIYPVENSEWVSPVVV 534
           ++ +L EV KLL+AG IYP+ +S WVSP  V
Sbjct: 886 QEVVLAEVLKLLQAGIIYPISDSPWVSPTQV 916



 Score = 27.3 bits (59), Expect(2) = 2e-04
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 365 VVEHHIRLNEGVKPVVQKLRRLGSY 439
           V  HHI + E  KP+ Q  RRL  Y
Sbjct: 860 VCTHHIYMEEEAKPIRQPQRRLNPY 884


>tr|A5BVC0|A5BVC0_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_000503 PE=4 SV=1
          Length = 1246

 Score = 40.8 bits (94), Expect(2) = 3e-04
 Identities = 18/33 (54%), Positives = 23/33 (69%)
 Frame = +1

Query: 436 IQEKALLVEVRKLLEAGFIYPVENSEWVSPVVV 534
           +QE  +  EV KLL+AG IYP+ +S WVSP  V
Sbjct: 526 MQEMVVRAEVLKLLQAGIIYPISDSPWVSPTQV 558



 Score = 26.6 bits (57), Expect(2) = 3e-04
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +2

Query: 356 GITVVEHHIRLNEGVKPVVQKLRRLGSY 439
           G  V  HHI + E  KPV Q  RRL  +
Sbjct: 498 GPLVYTHHIYMEEEAKPVHQPQRRLNPH 525


>tr|A5AK31|A5AK31_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_034913 PE=4 SV=1
          Length = 1030

 Score = 40.4 bits (93), Expect(2) = 6e-04
 Identities = 17/28 (60%), Positives = 22/28 (78%)
 Frame = +1

Query: 442 EKALLVEVRKLLEAGFIYPVENSEWVSP 525
           +K + VEV KLL+AG IYP+ +S WVSP
Sbjct: 745 QKVVRVEVLKLLQAGIIYPISDSPWVSP 772



 Score = 25.8 bits (55), Expect(2) = 6e-04
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 365 VVEHHIRLNEGVKPVVQKLRRLGSYKKR 448
           V  HHI + E  KP+ Q  RRL  + ++
Sbjct: 719 VYTHHIYMKEEAKPIRQPQRRLNPHLQK 746


>tr|A5AH70|A5AH70_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_032754 PE=4 SV=1
          Length = 2203

 Score = 38.1 bits (87), Expect(2) = 7e-04
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +1

Query: 442  EKALLVEVRKLLEAGFIYPVENSEWVSPVVV 534
            ++ +  EV KLL+AG IYP+ +S WVSP  V
Sbjct: 952  QEVVRAEVLKLLQAGIIYPISDSTWVSPTQV 982



 Score = 27.7 bits (60), Expect(2) = 7e-04
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 365  VVEHHIRLNEGVKPVVQKLRRLGSY 439
            +  HHI + EG KP  Q  RRL  +
Sbjct: 926  ICTHHIYMEEGAKPTXQPQRRLNPH 950


>tr|A5C0G4|A5C0G4_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_017406 PE=4 SV=1
          Length = 1117

 Score = 40.4 bits (93), Expect(2) = 7e-04
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +1

Query: 442 EKALLVEVRKLLEAGFIYPVENSEWVSPVVV 534
           ++ +  EV KLL+AGFIYP+ +S WVSP  V
Sbjct: 409 QEVVQTEVLKLLQAGFIYPISDSPWVSPTQV 439



 Score = 25.4 bits (54), Expect(2) = 7e-04
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 365 VVEHHIRLNEGVKPVVQKLRRLGSY 439
           V  HHI + E  KP+ Q  RRL  +
Sbjct: 383 VCTHHIYMEEEAKPIRQPQRRLNPH 407


>tr|A5AI38|A5AI38_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_014923 PE=4 SV=1
          Length = 1080

 Score = 40.0 bits (92), Expect(2) = 7e-04
 Identities = 16/31 (51%), Positives = 23/31 (74%)
 Frame = +1

Query: 442 EKALLVEVRKLLEAGFIYPVENSEWVSPVVV 534
           ++ ++ EV KLL+AG IYP+ +S WVSP  V
Sbjct: 435 QEVVITEVLKLLQAGIIYPISDSSWVSPTQV 465



 Score = 25.8 bits (55), Expect(2) = 7e-04
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = +2

Query: 365 VVEHHIRLNEGVKPVVQKLRRLGSY 439
           V  HHI + E  KPV Q  RRL  +
Sbjct: 409 VCTHHIYMEEEAKPVRQPQRRLNPH 433


>tr|A5BWH5|A5BWH5_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_024587 PE=4 SV=1
          Length = 2160

 Score = 40.0 bits (92), Expect(2) = 0.001
 Identities = 17/31 (54%), Positives = 22/31 (70%)
 Frame = +1

Query: 442 EKALLVEVRKLLEAGFIYPVENSEWVSPVVV 534
           ++ +  EV KLL+AG IYP+ NS WVSP  V
Sbjct: 726 QEVVRAEVLKLLQAGIIYPISNSPWVSPTQV 756



 Score = 25.4 bits (54), Expect(2) = 0.001
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 365 VVEHHIRLNEGVKPVVQKLRRLGSY 439
           V  HHI + E  KP+ Q  RRL  +
Sbjct: 700 VCTHHIYMEEEAKPIXQFQRRLNPH 724


>tr|A5C9C9|A5C9C9_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_039016 PE=4 SV=1
          Length = 2029

 Score = 36.6 bits (83), Expect(2) = 0.001
 Identities = 16/25 (64%), Positives = 19/25 (76%)
 Frame = +1

Query: 460  EVRKLLEAGFIYPVENSEWVSPVVV 534
            EV KLL+AG IYP+ +S WVSP  V
Sbjct: 1049 EVLKLLQAGIIYPISHSLWVSPTQV 1073



 Score = 28.5 bits (62), Expect(2) = 0.001
 Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 10/61 (16%)
 Frame = +2

Query: 287  KIVYRQMLMGFPNLFIDNYERITGIT----------VVEHHIRLNEGVKPVVQKLRRLGS 436
            K+V + +L+     +++  E+   +           V  HHI + E  KPV Q  RRL  
Sbjct: 981  KLVLKPLLVDLKYAYLEEDEKCPVVVSSTLTRINPLVCTHHIYMEEDAKPVRQPQRRLNP 1040

Query: 437  Y 439
            Y
Sbjct: 1041 Y 1041


>tr|A5AWD1|A5AWD1_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_028047 PE=4 SV=1
          Length = 1817

 Score = 38.1 bits (87), Expect(2) = 0.001
 Identities = 16/31 (51%), Positives = 22/31 (70%)
 Frame = +1

Query: 442  EKALLVEVRKLLEAGFIYPVENSEWVSPVVV 534
            ++ +  EV KLL+AG IYP+ +S WVSP  V
Sbjct: 979  QEVVRAEVLKLLQAGIIYPISDSTWVSPTQV 1009



 Score = 26.9 bits (58), Expect(2) = 0.001
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 365  VVEHHIRLNEGVKPVVQKLRRLGSY 439
            +  HHI + EG KP  Q  RRL  +
Sbjct: 953  ICTHHIYMEEGAKPTRQPQRRLNPH 977


>tr|A5BP84|A5BP84_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_026276 PE=4 SV=1
          Length = 1755

 Score = 39.3 bits (90), Expect(2) = 0.001
 Identities = 17/31 (54%), Positives = 23/31 (74%)
 Frame = +1

Query: 442  EKALLVEVRKLLEAGFIYPVENSEWVSPVVV 534
            ++ + VEV KLL+AG IYP+ +S WVSP  V
Sbjct: 970  QEMVQVEVLKLLQAGIIYPISDSPWVSPTQV 1000



 Score = 25.8 bits (55), Expect(2) = 0.001
 Identities = 14/36 (38%), Positives = 20/36 (55%)
 Frame = +2

Query: 332  IDNYERITGITVVEHHIRLNEGVKPVVQKLRRLGSY 439
            I + + IT + V  HHI + E  KP+ Q  RRL  +
Sbjct: 934  ISDLKCITSL-VCTHHIYMEEEAKPIRQHQRRLNPH 968