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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914671
Clone id YMU001_000061_F01
Library
Length 452
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000061_F01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CTGGCGGGGATCAAGGTCGCTGAACGCAAACAAAAAATGAACAAGAGGGTTCTTGAGAAG
GCATACCTCTGATCTTTCATATTCAAGGATGACTTGCACAAGGGCGTCATCTGTTGCAAA
AAAGAAGCCAAGTTGTGCAGGATCGGGAGCTGCAGCACCTGGATCTGGGCTTGATGATGG
GCTCGCAGGCGCTAGGGCTACATCCGAGATGGAGATGTTAACCATTCCTCGCAGTGTGAA
GCCAAACTTCTCGAAGAGGATGATGGGTCGCGTGTCGCGCTCAAAGACGGGATTCTTGAT
TTCTGCATTGCTCAGCTGAGGAAGTCCCACCAGAAGCACGCAAGAAATGAGAAGGATCTT
CATAGCTCCAAATGCCATAGCTTGCTTCCTTGCTGTAAACAAGCAGGAACGGGGAGGTGG
GGGTGGTTGTGAAAGGCGGACGGCAGCTGTGT
■■Homology search results ■■ -
sp_hit_id Q9Y5S8
Definition sp|Q9Y5S8|NOX1_HUMAN NADPH oxidase 1 OS=Homo sapiens
Align length 53
Score (bit) 30.8
E-value 2.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914671|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_F01.
         (432 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9Y5S8|NOX1_HUMAN NADPH oxidase 1 OS=Homo sapiens GN=NOX1 PE=...    31   2.5  
sp|Q06RF0|MATK_JASNU Maturase K OS=Jasminum nudiflorum GN=matK P...    29   9.6  
sp|Q62927|CNGA1_RAT cGMP-gated cation channel alpha-1 OS=Rattus ...    29   9.6  
sp|P44937|CDSA_HAEIN Phosphatidate cytidylyltransferase OS=Haemo...    29   9.6  

>sp|Q9Y5S8|NOX1_HUMAN NADPH oxidase 1 OS=Homo sapiens GN=NOX1 PE=1
           SV=2
          Length = 564

 Score = 30.8 bits (68), Expect = 2.5
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
 Frame = -2

Query: 158 VLQLPILHNLASFLQQMTPLCKSSLNMK-DQRYAFSRTLLFIFCLRSATLIPA 3
           ++ LP+  NL SFL+     C  +L  + D    F + + ++ CL +A  I A
Sbjct: 66  LILLPVCRNLLSFLRGTCSFCSRTLRKQLDHNLTFHKLVAYMICLHTAIHIIA 118


>sp|Q06RF0|MATK_JASNU Maturase K OS=Jasminum nudiflorum GN=matK PE=3
           SV=1
          Length = 506

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -1

Query: 126 FFFATDDALVQVILEYERSEVCLLKNPLVHFL 31
           +F+   + LV V L+  +  +CLLK+P +H++
Sbjct: 247 YFYGKIERLVNVFLKDFQINLCLLKDPFMHYV 278


>sp|Q62927|CNGA1_RAT cGMP-gated cation channel alpha-1 OS=Rattus
           norvegicus GN=Cnga1 PE=2 SV=1
          Length = 683

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 12/27 (44%), Positives = 19/27 (70%)
 Frame = +1

Query: 238 EAKLLEEDDGSRVALKDGILDFCIAQL 318
           +AK + E+ G ++ +KDG+LD  IA L
Sbjct: 581 DAKTMLEEKGRQILMKDGLLDINIANL 607


>sp|P44937|CDSA_HAEIN Phosphatidate cytidylyltransferase
           OS=Haemophilus influenzae GN=cdsA PE=3 SV=1
          Length = 288

 Score = 28.9 bits (63), Expect = 9.6
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = -1

Query: 93  VILEYERSEVCLLKNPLVHFLFAFSDLDP 7
           +++ Y +S     KNPL+  LFAFS L P
Sbjct: 104 LVISYPKSAKFWSKNPLLQLLFAFSTLIP 132
tr_hit_id Q56YB8
Definition tr|Q56YB8|Q56YB8_ARATH Putative uncharacterized protein At5g18520 OS=Arabidopsis thaliana
Align length 125
Score (bit) 71.2
E-value 2.0e-11
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914671|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_F01.
         (432 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q56YB8|Q56YB8_ARATH Putative uncharacterized protein At5g1852...    71   2e-11
tr|Q9C5T6|Q9C5T6_ARATH Putative uncharacterized protein F11F8_41...    70   4e-11
tr|A2WWR8|A2WWR8_ORYSI Putative uncharacterized protein OS=Oryza...    65   2e-09
tr|Q8S1S0|Q8S1S0_ORYSJ cDNA clone:001-038-A01, full insert seque...    64   4e-09
tr|A7Q428|A7Q428_VITVI Chromosome chr13 scaffold_48, whole genom...    64   5e-09
tr|B8LNJ3|B8LNJ3_PICSI Putative uncharacterized protein OS=Picea...    63   6e-09
tr|Q6L517|Q6L517_ORYSJ Os05g0462500 protein OS=Oryza sativa subs...    63   8e-09
tr|A2Y5H5|A2Y5H5_ORYSI Putative uncharacterized protein OS=Oryza...    63   8e-09
tr|B4FA55|B4FA55_MAIZE Putative uncharacterized protein OS=Zea m...    62   1e-08
tr|A9RYU2|A9RYU2_PHYPA Predicted protein OS=Physcomitrella paten...    61   2e-08
tr|A5BGF3|A5BGF3_VITVI Putative uncharacterized protein OS=Vitis...    60   4e-08
tr|Q9LZ39|Q9LZ39_ARATH Putative uncharacterized protein T22P11_2...    56   8e-07
tr|B8LP01|B8LP01_PICSI Putative uncharacterized protein OS=Picea...    55   2e-06
tr|A9T083|A9T083_PHYPA Predicted protein OS=Physcomitrella paten...    55   2e-06
tr|Q9FHX6|Q9FHX6_ARATH Dbj|BAA84809.1 (Putative uncharacterized ...    54   5e-06
tr|Q8LC50|Q8LC50_ARATH Putative uncharacterized protein OS=Arabi...    54   5e-06
tr|B4FVK4|B4FVK4_MAIZE Putative uncharacterized protein OS=Zea m...    53   7e-06
tr|B4FG64|B4FG64_MAIZE Putative uncharacterized protein OS=Zea m...    52   1e-05
tr|A7PSV8|A7PSV8_VITVI Chromosome chr8 scaffold_29, whole genome...    52   1e-05
tr|A2ZZC6|A2ZZC6_ORYSJ Putative uncharacterized protein OS=Oryza...    52   1e-05
tr|Q9SNM0|Q9SNM0_ORYSJ Os06g0132100 protein OS=Oryza sativa subs...    51   3e-05
tr|A2Y8W7|A2Y8W7_ORYSI Putative uncharacterized protein OS=Oryza...    51   3e-05
tr|A7PZ28|A7PZ28_VITVI Chromosome chr4 scaffold_39, whole genome...    50   4e-05
tr|A5AVG0|A5AVG0_VITVI Putative uncharacterized protein OS=Vitis...    50   4e-05
tr|B6TBV2|B6TBV2_MAIZE Protein GPR108 OS=Zea mays PE=2 SV=1            50   6e-05
tr|B4FS46|B4FS46_MAIZE Putative uncharacterized protein OS=Zea m...    50   6e-05
tr|Q5NKS8|Q5NKS8_SORBI Putative uncharacterized protein 131L1.5 ...    49   1e-04
tr|A9S9T7|A9S9T7_PHYPA Predicted protein OS=Physcomitrella paten...    46   8e-04
tr|A7QJ51|A7QJ51_VITVI Chromosome chr2 scaffold_105, whole genom...    46   0.001
tr|B6UCS7|B6UCS7_MAIZE Protein GPR107 OS=Zea mays PE=2 SV=1            42   0.015

>tr|Q56YB8|Q56YB8_ARATH Putative uncharacterized protein At5g18520
           OS=Arabidopsis thaliana GN=At5g18520 PE=2 SV=1
          Length = 440

 Score = 71.2 bits (173), Expect = 2e-11
 Identities = 47/125 (37%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
 Frame = -1

Query: 378 MAFGAMKILLISCVLLVGLPQLSNAEIKNPVFERDTRPIILFEKFGFTLRGMVNISISDV 199
           M    +  LL S   L     +S AEIK+ V   D RP+ILFEKFGFT  G V +SIS V
Sbjct: 4   MPLSVVVFLLFSAAFLA----VSMAEIKSLVISDDARPMILFEKFGFTHTGHVTVSISSV 59

Query: 198 ALXXXXXXXXXXXXXXXXXXAQLGFFFATDDALVQVILEYERS-EVCLLKNPLVHFLFAF 22
           ++                  ++LGFF  ++++L+QV+LE +++   C+L +  V  LF F
Sbjct: 60  SV-------VSTSSDPNPEASRLGFFLLSEESLLQVLLEIQQNPRFCVLDSHYVTHLFTF 112

Query: 21  SDLDP 7
            DL P
Sbjct: 113 RDLSP 117


>tr|Q9C5T6|Q9C5T6_ARATH Putative uncharacterized protein F11F8_41
           (At3g09570) (Putative uncharacterized protein At3g09570)
           OS=Arabidopsis thaliana GN=F11F8_41 PE=2 SV=1
          Length = 439

 Score = 70.5 bits (171), Expect = 4e-11
 Identities = 42/101 (41%), Positives = 60/101 (59%), Gaps = 1/101 (0%)
 Frame = -1

Query: 306 AEIKNPVFERDTRPIILFEKFGFTLRGMVNISISDVALXXXXXXXXXXXXXXXXXXAQLG 127
           AEIK+     D+RP+ILFEKFGFT  G V++SIS VA+                  ++LG
Sbjct: 23  AEIKSLTISDDSRPMILFEKFGFTQSGHVSVSISSVAV-------VSSSSDPIPDPSRLG 75

Query: 126 FFFATDDALVQVILEYERS-EVCLLKNPLVHFLFAFSDLDP 7
           FF  ++++L+QV+LE E++   C+L +  V  LF F DL P
Sbjct: 76  FFLMSEESLLQVVLEIEQNPNFCVLDSNYVLHLFTFHDLSP 116


>tr|A2WWR8|A2WWR8_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_04345 PE=4 SV=1
          Length = 449

 Score = 64.7 bits (156), Expect = 2e-09
 Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
 Frame = -1

Query: 381 AMAFGAMKILLISCVLLVGLPQLSNAEIKNPVFERDTRPIILFEKFGFTLRGMVNISISD 202
           A A  A + LL+   +   L + + AEIK   F+ D+R  ILFEKFGF+ RG V+I+I+ 
Sbjct: 2   ATAAAAARALLLLIAVAGALLRPAAAEIKQESFKEDSRASILFEKFGFSRRGFVSIAITG 61

Query: 201 VALXXXXXXXXXXXXXXXXXXAQLGFFFATDDALVQVILEY----------ERSEVCLLK 52
                                 Q GFF  +D+AL + I E           E +  C+L 
Sbjct: 62  A---------RTSSKLAKAEPDQFGFFLLSDEALFEAIYEQPPPTDLNPNPEPNPGCVLS 112

Query: 51  NPLVHFLFAFSDLD 10
           +P V  LF+F+DLD
Sbjct: 113 SPYVKPLFSFADLD 126


>tr|Q8S1S0|Q8S1S0_ORYSJ cDNA clone:001-038-A01, full insert sequence
           OS=Oryza sativa subsp. japonica GN=P0506B12.33 PE=2 SV=1
          Length = 449

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
 Frame = -1

Query: 381 AMAFGAMKILLISCVLLVGLPQLSNAEIKNPVFERDTRPIILFEKFGFTLRGMVNISISD 202
           A A  A + LL+   +   L + + AEIK   F+ D+R  ILFEKFGF+ RG V+I+I+ 
Sbjct: 2   ATAAAAARALLLLIAVAGALLRPAAAEIKQESFKDDSRASILFEKFGFSRRGFVSIAITG 61

Query: 201 VALXXXXXXXXXXXXXXXXXXAQLGFFFATDDALVQVILEY----------ERSEVCLLK 52
                                 Q GFF  +D+AL + I E           E +  C+L 
Sbjct: 62  A---------RTSSKLAKAEPDQFGFFLLSDEALFEAIYEQPPPTDLNPNPEPNPGCVLS 112

Query: 51  NPLVHFLFAFSDLD 10
           +P V  LF+F+DLD
Sbjct: 113 SPYVKPLFSFADLD 126


>tr|A7Q428|A7Q428_VITVI Chromosome chr13 scaffold_48, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00029514001
           PE=4 SV=1
          Length = 414

 Score = 63.5 bits (153), Expect = 5e-09
 Identities = 41/118 (34%), Positives = 61/118 (51%), Gaps = 1/118 (0%)
 Frame = -1

Query: 351 LISCVLLVGLPQLSNAEIKNPVFERDTRPIILFEKFGFTLRGMVNISISDVALXXXXXXX 172
           L+  V  + L   S AEIKN     D R +ILFEKFGFT  G V+I++S V++       
Sbjct: 8   LLVAVTFLSLMAASVAEIKNLKITSDARHMILFEKFGFTHTGQVSIAVSGVSV------E 61

Query: 171 XXXXXXXXXXXAQLGFFFATDDALVQVILE-YERSEVCLLKNPLVHFLFAFSDLDPRQ 1
                      +++GFF  +D++L+QV+ E  +    C+L +     LF F DL P +
Sbjct: 62  ATSAATGTPANSRIGFFLLSDESLLQVVQESTQNPNFCVLDSQFTIHLFTFLDLTPNR 119


>tr|B8LNJ3|B8LNJ3_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 445

 Score = 63.2 bits (152), Expect = 6e-09
 Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 1/120 (0%)
 Frame = -1

Query: 366 AMKILLISCVLLVGLPQLSNAEIKNPVFERDTRPIILFEKFGFTLRGMVNISISDVALXX 187
           AM ILL S   L+G     +AEI++     D R II F++FGFT  G + I + + +   
Sbjct: 9   AMAILLFSMAFLMGFLPFCSAEIRHSEIRSDDRSIIPFDEFGFTHEGRLEIYVKEAS--- 65

Query: 186 XXXXXXXXXXXXXXXXAQLGFFFATDDALVQVILEYERSEV-CLLKNPLVHFLFAFSDLD 10
                             +GFF +T DA   V+ + E  E+ C+L++ L+  LF F DL+
Sbjct: 66  -----YKHLKGETINPVHMGFFLSTRDAWAHVLQDLEHGEIHCVLESKLIVHLFTFKDLE 120


>tr|Q6L517|Q6L517_ORYSJ Os05g0462500 protein OS=Oryza sativa subsp.
           japonica GN=OJ1525_A02.8 PE=4 SV=1
          Length = 458

 Score = 62.8 bits (151), Expect = 8e-09
 Identities = 48/142 (33%), Positives = 64/142 (45%), Gaps = 20/142 (14%)
 Frame = -1

Query: 378 MAFGAMKILLIS-CVLLVGLPQLSNAEIKNPVFERDTRPIILFEKFGFTLRGMVNISISD 202
           MA  A ++LL++  V  V L   + AEI+   F  D RP ILFEKFGF+  G V I I+ 
Sbjct: 1   MAAAARRLLLLAIAVAAVSLAPRAAAEIRTEAFREDPRPTILFEKFGFSKTGAVRIVITG 60

Query: 201 VALXXXXXXXXXXXXXXXXXXAQLGFFFATDDALVQVILEYE-------RSEV------- 64
             +                   QLGFF  +D+++ Q I E +       R EV       
Sbjct: 61  AGI---------SSTFARPDPKQLGFFLLSDESMFQAIYEAQARRPPERREEVAGGGADE 111

Query: 63  -----CLLKNPLVHFLFAFSDL 13
                C+L +P V  LF F DL
Sbjct: 112 PDVSRCILTSPYVKTLFTFHDL 133


>tr|A2Y5H5|A2Y5H5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_20245 PE=4 SV=1
          Length = 458

 Score = 62.8 bits (151), Expect = 8e-09
 Identities = 48/142 (33%), Positives = 64/142 (45%), Gaps = 20/142 (14%)
 Frame = -1

Query: 378 MAFGAMKILLIS-CVLLVGLPQLSNAEIKNPVFERDTRPIILFEKFGFTLRGMVNISISD 202
           MA  A ++LL++  V  V L   + AEI+   F  D RP ILFEKFGF+  G V I I+ 
Sbjct: 1   MAAAARRLLLLAIAVAAVSLAPRAAAEIRTEAFREDPRPTILFEKFGFSKTGAVRIVITG 60

Query: 201 VALXXXXXXXXXXXXXXXXXXAQLGFFFATDDALVQVILEYE-------RSEV------- 64
             +                   QLGFF  +D+++ Q I E +       R EV       
Sbjct: 61  AGI---------SSTFARPDPKQLGFFLLSDESMFQAIYEAQARRPPERREEVAGGGADE 111

Query: 63  -----CLLKNPLVHFLFAFSDL 13
                C+L +P V  LF F DL
Sbjct: 112 PDVSRCILTSPYVKTLFTFHDL 133


>tr|B4FA55|B4FA55_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 450

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 10/134 (7%)
 Frame = -1

Query: 381 AMAFGAMKILLISCVLLVGLPQLSNAEIKNPVFERDTRPIILFEKFGFTLRGMVNISISD 202
           A A   + +L +S VLL      + AEIK   F+ D+R  ILFEKFGF L GMV+IS++ 
Sbjct: 7   AAARAVLLLLAVSGVLL----SPAAAEIKQESFKDDSRGSILFEKFGFGLHGMVSISVTG 62

Query: 201 VALXXXXXXXXXXXXXXXXXXAQLGFFFATDDALVQVILEY----------ERSEVCLLK 52
                                AQLGFF  +D++L + I +           E S  C+L 
Sbjct: 63  A---------KYSSKLAKPDPAQLGFFLLSDESLFEAIYDQPAPTDLNPNPESSPTCVLA 113

Query: 51  NPLVHFLFAFSDLD 10
           +P V  LF F+++D
Sbjct: 114 SPYVRPLFTFAEVD 127


>tr|A9RYU2|A9RYU2_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_179511 PE=4 SV=1
          Length = 432

 Score = 61.2 bits (147), Expect = 2e-08
 Identities = 40/115 (34%), Positives = 63/115 (54%), Gaps = 1/115 (0%)
 Frame = -1

Query: 351 LISCVLLVGLPQLSNAEIKNPVFERDTRPIILFEKFGFTLRGMVNISISDVALXXXXXXX 172
           L+  VL V L  ++ AEIK+   + D RPII FE FGF++ G V++ +S+V +       
Sbjct: 11  LVVMVLAVALFPVAFAEIKHLSIKNDARPIIPFETFGFSIGGEVSVIVSEVEV------- 63

Query: 171 XXXXXXXXXXXAQLGFFFATDDALVQVILEYE-RSEVCLLKNPLVHFLFAFSDLD 10
                      +++GFF +T D LV VI + E + + CLL +  +H LF  ++ D
Sbjct: 64  ----KEPGADRSRMGFFLSTMDDLVPVIAQLEAQGKNCLLDSASMHTLFTLAETD 114