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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914681
Clone id YMU001_000061_G01
Library
Length 553
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000061_G01.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
GGCAACACAGTCGCAGATTGCACCGAGTCCAAAAGTCAAACATAAGAGTCGAGTTGAGGC
ATGCACATTGACACACTAAAACTTGCAACATTTGGATAGCCTCATGGACTCTACATGTGT
CTCAAATCTACCTAGTGGAGCTATTATTATTGACAATAACTTGACCCTCAATAAAAATCT
CGATTTTCCAAGTTGTCTCTTGTTTGAAGTCTAGCTTTAGCATCATTCCCCAATGCCACA
ATACCTTGCAGAGCTCTCAGCAAAGCAGACCACCAGCCTCCTGTGGGCAGTTCTTGTTGT
AATAGTTCATCTTCAATCTCATCGTCATGCTGACCTCGCAATACCTCTTGCAACACCCTG
GCAGCATCACTGGTCCTTGTTAAAATACCACCAGCCATACCCCTTGCAGCAAATGCTTGG
AGATCTTGTTGTGACGTCATTAATGCCATAGTTATAGTCTTATGCCTACGATTTTTGGAG
GTTTCTGAGGTCCTCTTTTCTTCTGCTTGTTTGTCAATGTCCAACTTGAGATTTGTCTCG
CCCATTGTAATGT
■■Homology search results ■■ -
sp_hit_id Q9C8G9
Definition sp|Q9C8G9|MRP1_ARATH Multidrug resistance-associated protein 1 OS=Arabidopsis thaliana
Align length 95
Score (bit) 40.8
E-value 0.004
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914681|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_G01.
         (553 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9C8G9|MRP1_ARATH Multidrug resistance-associated protein 1 O...    41   0.004
sp|Q42093|MRP2_ARATH Multidrug resistance-associated protein 2 O...    40   0.006
sp|O31976|YOMI_BACSU SPBc2 prophage-derived uncharacterized tran...    32   2.0  
sp|Q9W6R5|XLRS1_FUGRU Retinoschisin OS=Fugu rubripes GN=xlrs1 PE...    30   7.9  

>sp|Q9C8G9|MRP1_ARATH Multidrug resistance-associated protein 1
            OS=Arabidopsis thaliana GN=MRP1 PE=1 SV=1
          Length = 1622

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
 Frame = -3

Query: 455  ITMALMTSQQDLQAFAARGMAGGILTRTSDAARVLQEVLRGXXXXXXXXXXXXXXLPTGG 276
            + ++L +S  DLQ+         IL +T DA   L+ VL G              +    
Sbjct: 1522 LAVSLTSSHNDLQSLEIED-DNSILKKTKDAVVTLRSVLEGKHDKEIEDSLNQSDISRER 1580

Query: 275  WWSALLRALQGIVALGNDAKARLQTRD-NLENRDF 174
            WW +L + ++G+  +   A+ R+Q  D NLE + F
Sbjct: 1581 WWPSLYKMVEGLAVMSRLARNRMQHPDYNLEGKSF 1615


>sp|Q42093|MRP2_ARATH Multidrug resistance-associated protein 2
            OS=Arabidopsis thaliana GN=MRP2 PE=1 SV=2
          Length = 1623

 Score = 40.4 bits (93), Expect = 0.006
 Identities = 28/95 (29%), Positives = 43/95 (45%), Gaps = 1/95 (1%)
 Frame = -3

Query: 455  ITMALMTSQQDLQAFAARGMAGGILTRTSDAARVLQEVLRGXXXXXXXXXXXXXXLPTGG 276
            +  +L +S  DLQ+      +  IL RT+DA   L+ VL G              +   G
Sbjct: 1523 LAASLTSSHNDLQSLEIEDDSS-ILKRTNDAVVTLRSVLEGKHDKEIAESLEEHNISREG 1581

Query: 275  WWSALLRALQGIVALGNDAKARLQTRD-NLENRDF 174
            W S+L R ++G+  +   A+ R+Q  D N E   F
Sbjct: 1582 WLSSLYRMVEGLAVMSRLARNRMQQPDYNFEGNTF 1616


>sp|O31976|YOMI_BACSU SPBc2 prophage-derived uncharacterized
           transglycosylase yomI OS=Bacillus subtilis GN=yomI PE=3
           SV=1
          Length = 2285

 Score = 32.0 bits (71), Expect = 2.0
 Identities = 28/98 (28%), Positives = 46/98 (46%)
 Frame = -3

Query: 479 SKNRRHKTITMALMTSQQDLQAFAARGMAGGILTRTSDAARVLQEVLRGXXXXXXXXXXX 300
           SKN R    ++ L T     +  A  G+  G +TR + A+RVL+  LRG           
Sbjct: 695 SKNTRTLASSLILGTRAMGQETLATAGLEAG-MTRAAVASRVLKTALRGLLVSTL----- 748

Query: 299 XXXLPTGGWWSALLRALQGIVALGNDAKARLQTRDNLE 186
                 GG ++AL  AL+ +++   +AK   + +D+ E
Sbjct: 749 -----VGGAFAALGWALESLISSFAEAK---KAKDDFE 778


>sp|Q9W6R5|XLRS1_FUGRU Retinoschisin OS=Fugu rubripes GN=xlrs1 PE=3
           SV=1
          Length = 280

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 16/31 (51%), Positives = 18/31 (58%)
 Frame = +1

Query: 418 WRSCCDVINAIVIVLCLRFLEVSEVLFSSAC 510
           WR C  V NAIV+  CL  L VSE   S +C
Sbjct: 59  WRGCMSVCNAIVV--CLFELGVSETWNSKSC 87
tr_hit_id A9TGD4
Definition tr|A9TGD4|A9TGD4_PHYPA ATP-binding cassette transporter, subfamily C, member 2, group MRP protein PpABCC2 OS=Physcomitrella patens subsp. patens
Align length 119
Score (bit) 55.1
E-value 2.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914681|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_G01.
         (553 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9TGD4|A9TGD4_PHYPA ATP-binding cassette transporter, subfami...    55   2e-06
tr|A9TGR0|A9TGR0_PHYPA ATP-binding cassette transporter, subfami...    55   3e-06
tr|A9TWW4|A9TWW4_PHYPA ATP-binding cassette transporter, subfami...    54   7e-06
tr|A7Q1B7|A7Q1B7_VITVI Chromosome chr10 scaffold_43, whole genom...    51   5e-05
tr|Q8GU51|Q8GU51_ORYSJ MRP-like ABC transporter (Fragment) OS=Or...    44   0.004
tr|Q7XTT6|Q7XTT6_ORYSJ OSJNBa0058K23.17 protein OS=Oryza sativa ...    44   0.004
tr|Q0JA19|Q0JA19_ORYSJ Os04g0620000 protein OS=Oryza sativa subs...    44   0.004
tr|Q01JU7|Q01JU7_ORYSA H0714H04.5 protein OS=Oryza sativa GN=H07...    44   0.004
tr|A3AXH7|A3AXH7_ORYSJ Putative uncharacterized protein OS=Oryza...    44   0.004
tr|A2XXN8|A2XXN8_ORYSI Putative uncharacterized protein OS=Oryza...    44   0.004
tr|B7FNG1|B7FNG1_MEDTR Putative uncharacterized protein OS=Medic...    41   0.048
tr|Q0WLP4|Q0WLP4_ARATH MRP-like ABC transporter (Fragment) OS=Ar...    40   0.063
tr|A7Q1C1|A7Q1C1_VITVI Chromosome chr10 scaffold_43, whole genom...    40   0.082
tr|B1Q479|B1Q479_CAPCH Putative multidrug resistance-associated ...    37   0.53 
tr|A9TJV3|A9TJV3_PHYPA Predicted protein OS=Physcomitrella paten...    34   5.9  
tr|Q8WQL9|Q8WQL9_LEUMA Male-specific beta-glycosidase OS=Leucoph...    33   7.8  
tr|B3MF31|B3MF31_DROAN GF11303 OS=Drosophila ananassae GN=GF1130...    33   7.8  
tr|A8PGA0|A8PGA0_COPC7 Predicted protein OS=Coprinopsis cinerea ...    33   7.8  

>tr|A9TGD4|A9TGD4_PHYPA ATP-binding cassette transporter, subfamily C,
            member 2, group MRP protein PpABCC2 OS=Physcomitrella
            patens subsp. patens GN=ppabcc2 PE=3 SV=1
          Length = 1633

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
 Frame = -3

Query: 551  ITMGETNLKLDIDKQAEEKRTSETSKNR----RHKTITMALMTSQQDLQAFAARGMAGGI 384
            I  GE ++K D++++AE  R    + +R        + M+L  SQQDL           I
Sbjct: 1494 IVKGEVDIKADLEQKAENVRRRGAASSRWATAAQWALAMSLTASQQDLTQICEGEGETTI 1553

Query: 383  LTRTSDAARVLQEVLRGXXXXXXXXXXXXXXLPTGGWWSALLRALQGIVALGNDAKARL 207
            L RT DAA+ L +VL G              +    WW AL+R ++G+  +    + RL
Sbjct: 1554 LERTRDAAQTLYQVLSGQHDSAISESLLQREVSEDRWWLALVRVVEGLGVMSRQVRNRL 1612


>tr|A9TGR0|A9TGR0_PHYPA ATP-binding cassette transporter, subfamily C,
            member 11, group MRP protein PpABCC11 OS=Physcomitrella
            patens subsp. patens GN=ppabcc11 PE=3 SV=1
          Length = 1630

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 10/126 (7%)
 Frame = -3

Query: 521  DIDKQAEEKRTSETSKNRRHKT----------ITMALMTSQQDLQAFAARGMAGGILTRT 372
            D+D+ AE ++ + T K +   T          + M+L T Q DL +    G    IL  T
Sbjct: 1495 DVDRMAEIEKDATTQKVKWEATSRWARAAQWALAMSLTTYQNDLSSACVDGEET-ILEVT 1553

Query: 371  SDAARVLQEVLRGXXXXXXXXXXXXXXLPTGGWWSALLRALQGIVALGNDAKARLQTRDN 192
             DA R L +VL G                  GWWSAL R L+G   +G +A+ R+    +
Sbjct: 1554 RDATRTLHQVLVGQHDTSIREALLQRQATEEGWWSALTRVLEGFALMGREARNRISHNQD 1613

Query: 191  LENRDF 174
             E  D+
Sbjct: 1614 REAFDW 1619


>tr|A9TWW4|A9TWW4_PHYPA ATP-binding cassette transporter, subfamily C,
            member 3, group MRP protein PpABCC3 OS=Physcomitrella
            patens subsp. patens GN=ppabcc3 PE=3 SV=1
          Length = 1622

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 4/130 (3%)
 Frame = -3

Query: 551  ITMGETNLKLDIDKQAEEKRTSETSKNRRHKT----ITMALMTSQQDLQAFAARGMAGGI 384
            I MG+ +   +I+++A  ++    + +R  +     + M+L TSQ DL +    G    I
Sbjct: 1483 IAMGDVDRIAEIEREATAQKVKWEATSRWARAAQWALAMSLTTSQDDLASVCVDGEET-I 1541

Query: 383  LTRTSDAARVLQEVLRGXXXXXXXXXXXXXXLPTGGWWSALLRALQGIVALGNDAKARLQ 204
            L  T DA R L +VL G                   WWSAL R L+G   +G + + R+ 
Sbjct: 1542 LEATRDATRTLHQVLLGHHDTSIRETLLQRQATEESWWSALTRVLEGFAVMGREGRNRIS 1601

Query: 203  TRDNLENRDF 174
               + E  D+
Sbjct: 1602 HDQDREPIDW 1611


>tr|A7Q1B7|A7Q1B7_VITVI Chromosome chr10 scaffold_43, whole genome
            shotgun sequence OS=Vitis vinifera GN=GSVIVT00028389001
            PE=3 SV=1
          Length = 1135

 Score = 50.8 bits (120), Expect = 5e-05
 Identities = 29/92 (31%), Positives = 44/92 (47%)
 Frame = -3

Query: 455  ITMALMTSQQDLQAFAARGMAGGILTRTSDAARVLQEVLRGXXXXXXXXXXXXXXLPTGG 276
            + ++L +SQ DLQ          IL +T DA   LQ VL G              +   G
Sbjct: 1036 LAVSLTSSQNDLQQLEIED-ENSILKKTKDAVITLQGVLEGKHDKVIEETLNQYQVSRDG 1094

Query: 275  WWSALLRALQGIVALGNDAKARLQTRDNLENR 180
            WWS+L R ++G+  +   A+ RLQ+ +  E+R
Sbjct: 1095 WWSSLYRMIEGLAVMSRLARNRLQSENGFEDR 1126


>tr|Q8GU51|Q8GU51_ORYSJ MRP-like ABC transporter (Fragment) OS=Oryza
            sativa subsp. japonica GN=mrp1 PE=3 SV=1
          Length = 1627

 Score = 44.3 bits (103), Expect = 0.004
 Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 4/124 (3%)
 Frame = -3

Query: 542  GETNLKLDIDKQAEEKRTSETSKN---RRHKTITMALMTSQQDLQAFAARGMAGGILTRT 372
            GE  L+ +  K  + +R    S          +  +L +S  DL A  A      IL +T
Sbjct: 1497 GEERLRKEESKMQDIQRKWVASNRWAVAAQFALAASLASSHSDLLALEA-AEGNNILRKT 1555

Query: 371  SDAARVLQEVLRGXXXXXXXXXXXXXXLPTGGWWSALLRALQGIVALGNDAKARLQTRD- 195
             DA   LQ VL G              +P+  WWS+L + ++G+  +    + RLQ    
Sbjct: 1556 KDAVITLQNVLEGKHNTEIDDTLAQYEVPSDRWWSSLYKVMEGLAMMSRLGRNRLQQPSY 1615

Query: 194  NLEN 183
            N EN
Sbjct: 1616 NFEN 1619


>tr|Q7XTT6|Q7XTT6_ORYSJ OSJNBa0058K23.17 protein OS=Oryza sativa
            subsp. japonica GN=OSJNBa0058K23.17 PE=3 SV=2
          Length = 1628

 Score = 44.3 bits (103), Expect = 0.004
 Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 4/124 (3%)
 Frame = -3

Query: 542  GETNLKLDIDKQAEEKRTSETSKN---RRHKTITMALMTSQQDLQAFAARGMAGGILTRT 372
            GE  L+ +  K  + +R    S          +  +L +S  DL A  A      IL +T
Sbjct: 1497 GEERLRKEESKMQDIQRKWVASNRWAVAAQFALAASLASSHSDLLALEA-AEGNNILRKT 1555

Query: 371  SDAARVLQEVLRGXXXXXXXXXXXXXXLPTGGWWSALLRALQGIVALGNDAKARLQTRD- 195
             DA   LQ VL G              +P+  WWS+L + ++G+  +    + RLQ    
Sbjct: 1556 KDAVITLQNVLEGKHNTEIDDTLAQYEVPSDRWWSSLYKVMEGLAMMSRLGRNRLQQPSY 1615

Query: 194  NLEN 183
            N EN
Sbjct: 1616 NFEN 1619


>tr|Q0JA19|Q0JA19_ORYSJ Os04g0620000 protein OS=Oryza sativa subsp.
            japonica GN=Os04g0620000 PE=3 SV=1
          Length = 1650

 Score = 44.3 bits (103), Expect = 0.004
 Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 4/124 (3%)
 Frame = -3

Query: 542  GETNLKLDIDKQAEEKRTSETSKN---RRHKTITMALMTSQQDLQAFAARGMAGGILTRT 372
            GE  L+ +  K  + +R    S          +  +L +S  DL A  A      IL +T
Sbjct: 1519 GEERLRKEESKMQDIQRKWVASNRWAVAAQFALAASLASSHSDLLALEA-AEGNNILRKT 1577

Query: 371  SDAARVLQEVLRGXXXXXXXXXXXXXXLPTGGWWSALLRALQGIVALGNDAKARLQTRD- 195
             DA   LQ VL G              +P+  WWS+L + ++G+  +    + RLQ    
Sbjct: 1578 KDAVITLQNVLEGKHNTEIDDTLAQYEVPSDRWWSSLYKVMEGLAMMSRLGRNRLQQPSY 1637

Query: 194  NLEN 183
            N EN
Sbjct: 1638 NFEN 1641


>tr|Q01JU7|Q01JU7_ORYSA H0714H04.5 protein OS=Oryza sativa
            GN=H0714H04.5 PE=3 SV=1
          Length = 1628

 Score = 44.3 bits (103), Expect = 0.004
 Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 4/124 (3%)
 Frame = -3

Query: 542  GETNLKLDIDKQAEEKRTSETSKN---RRHKTITMALMTSQQDLQAFAARGMAGGILTRT 372
            GE  L+ +  K  + +R    S          +  +L +S  DL A  A      IL +T
Sbjct: 1497 GEERLRKEESKMQDIQRKWVASNRWAVAAQFALAASLASSHSDLLALEA-AEGNNILRKT 1555

Query: 371  SDAARVLQEVLRGXXXXXXXXXXXXXXLPTGGWWSALLRALQGIVALGNDAKARLQTRD- 195
             DA   LQ VL G              +P+  WWS+L + ++G+  +    + RLQ    
Sbjct: 1556 KDAVITLQNVLEGKHNTEIDDTLAQYEVPSDRWWSSLYKVMEGLAMMSRLGRNRLQQPSY 1615

Query: 194  NLEN 183
            N EN
Sbjct: 1616 NFEN 1619


>tr|A3AXH7|A3AXH7_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_015499 PE=3 SV=1
          Length = 1463

 Score = 44.3 bits (103), Expect = 0.004
 Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 4/124 (3%)
 Frame = -3

Query: 542  GETNLKLDIDKQAEEKRTSETSKN---RRHKTITMALMTSQQDLQAFAARGMAGGILTRT 372
            GE  L+ +  K  + +R    S          +  +L +S  DL A  A      IL +T
Sbjct: 1332 GEERLRKEESKMQDIQRKWVASNRWAVAAQFALAASLASSHSDLLALEA-AEGNNILRKT 1390

Query: 371  SDAARVLQEVLRGXXXXXXXXXXXXXXLPTGGWWSALLRALQGIVALGNDAKARLQTRD- 195
             DA   LQ VL G              +P+  WWS+L + ++G+  +    + RLQ    
Sbjct: 1391 KDAVITLQNVLEGKHNTEIDDTLAQYEVPSDRWWSSLYKVMEGLAMMSRLGRNRLQQPSY 1450

Query: 194  NLEN 183
            N EN
Sbjct: 1451 NFEN 1454


>tr|A2XXN8|A2XXN8_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_17449 PE=3 SV=1
          Length = 1650

 Score = 44.3 bits (103), Expect = 0.004
 Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 4/124 (3%)
 Frame = -3

Query: 542  GETNLKLDIDKQAEEKRTSETSKN---RRHKTITMALMTSQQDLQAFAARGMAGGILTRT 372
            GE  L+ +  K  + +R    S          +  +L +S  DL A  A      IL +T
Sbjct: 1519 GEERLRKEESKMQDIQRKWVASNRWAVAAQFALAASLASSHSDLLALEA-AEGNNILRKT 1577

Query: 371  SDAARVLQEVLRGXXXXXXXXXXXXXXLPTGGWWSALLRALQGIVALGNDAKARLQTRD- 195
             DA   LQ VL G              +P+  WWS+L + ++G+  +    + RLQ    
Sbjct: 1578 KDAVITLQNVLEGKHNTEIDDTLAQYEVPSDRWWSSLYKVMEGLAMMSRLGRNRLQQPSY 1637

Query: 194  NLEN 183
            N EN
Sbjct: 1638 NFEN 1641