BP914683
Clone id YMU001_000061_G03
Library
Length 550
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000061_G03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AAAGACACTACATCTGTTCAAGTCTGTATGACCCGATCAAGTTTTCATCAAAAAACCTTA
TTGCATGAACATGTCTACCGGGTCGCATTATCTAGCATCCCTCTACTAATGATCAAAGAA
AATCTGCTAAAACAACCTAACAATTATCCAGAACTACTTTCACACCATCCATAGACAGAT
TATTCATCGAGAGAGACAACTCCCAACTGGGCTGTCAATAAACCTTAAAATTCCCTATCA
CCTTCCTCCCAAAAGGACCATCTTTGCCTGCCATCCGCTACCACACTTTGTGGGAACCAC
CTCCAGCCTTATATTGATTACACAGAGCTGGACGCAATTCTTGAACCTTCTCCCCTCATC
ACAGTAGCAAAACACAGGGGTGCGGAGTACCATCCAAAACAGCATTCAACGCCGCATGCT
CCTTTGCATTCGATCTGCCCATGCTTAATCCTCGCATTCACTTTGAATTCAGTACACAGC
CTCTGAACAAAGAACCTTCAGGAACCTTCACACGTTTCATGTAAAAGTTCCCAACCAAGA
AATGTCCCAG
■■Homology search results ■■ -
sp_hit_id Q92543
Definition sp|Q92543|SNX19_HUMAN Sorting nexin-19 OS=Homo sapiens
Align length 59
Score (bit) 31.2
E-value 3.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914683|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_G03.
(550 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q92543|SNX19_HUMAN Sorting nexin-19 OS=Homo sapiens GN=SNX19 ... 31 3.5
sp|Q9NYA4|MTMR4_HUMAN Myotubularin-related protein 4 OS=Homo sap... 30 5.9
sp|Q10199|IMP2_SCHPO Septation protein imp2 OS=Schizosaccharomyc... 30 6.0
sp|Q00918|LTBP1_RAT Latent-transforming growth factor beta-bindi... 28 6.0

>sp|Q92543|SNX19_HUMAN Sorting nexin-19 OS=Homo sapiens GN=SNX19
PE=1 SV=1
Length = 992

Score = 31.2 bits (69), Expect = 3.5
Identities = 24/59 (40%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Frame = +1

Query: 244 SSQKDHLCLPSATTLCGNHLQPYIDYTELDA----ILEPSPLITVAKHRGAEYHPKQHS 408
S H S TLCG HLQ YI E A +EPS L A R HP HS
Sbjct: 147 SVMDSHAVAQSVLTLCGCHLQSYIQAKEATAGKNGPVEPSHL-WEAYCRATAPHPAVHS 204


>sp|Q9NYA4|MTMR4_HUMAN Myotubularin-related protein 4 OS=Homo
sapiens GN=MTMR4 PE=2 SV=1
Length = 1195

Score = 30.4 bits (67), Expect = 5.9
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +3

Query: 327 AGRNS*TFSPHHSSKTQGCGVPSKTAFNAACSFAFDLPMLNPRIHFEFSTQPLNKEPSGT 506
+ +NS T +P + GVPSK + + S + P + + ST LN++PSG+
Sbjct: 781 SSQNSPTGTPQQAQPDSMLGVPSKCVLDHSLSTVCNPPSAACQTPLDPSTDFLNQDPSGS 840


>sp|Q10199|IMP2_SCHPO Septation protein imp2 OS=Schizosaccharomyces
pombe GN=imp2 PE=1 SV=1
Length = 670

Score = 30.4 bits (67), Expect = 6.0
Identities = 32/109 (29%), Positives = 47/109 (43%), Gaps = 13/109 (11%)
Frame = +1

Query: 136 PNNYPELLSHHP*TDYSSRETTPNW-AVNKP*NSLSPSSQKDHLCLPSATTLCGNHLQ-- 306
P N P +LS + S T PN + + ++S +S ++ P + L L
Sbjct: 322 PLNRPYVLSATARNESSFENTLPNTPSAIQSLTTVSSNSSQNGRSSPKKSFLSKFKLTSR 381

Query: 307 ---PYIDYTELDAILEP---SPLITVA----KHRGAEYHPKQHSTPHAP 423
P + T DA+ P SPL + A KH + PKQ+ TP AP
Sbjct: 382 PSTPNVGNTAPDALSSPRNDSPLTSAADEQMKHLSLQEEPKQNPTPAAP 430


>sp|Q00918|LTBP1_RAT Latent-transforming growth factor beta-binding
protein 1 OS=Rattus norvegicus GN=Ltbp1 PE=1 SV=1
Length = 1712

Score = 27.7 bits (60), Expect(2) = 6.0
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3

Query: 437 QIECKGACGVECCFGWYSAP 378
Q++ CG +CC GW AP
Sbjct: 156 QLQGINVCGGQCCHGWSKAP 175



Score = 21.2 bits (43), Expect(2) = 6.0
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2

Query: 393 MVLRTPVFCYCDEGRRFKNC 334
M LR P FC C G + K C
Sbjct: 194 MCLR-PQFCVCKPGTKGKAC 212


tr_hit_id Q3JTN4
Definition tr|Q3JTN4|Q3JTN4_BURP1 Gp58 OS=Burkholderia pseudomallei (strain 1710b)
Align length 52
Score (bit) 36.6
E-value 0.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914683|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_G03.
(550 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q3JTN4|Q3JTN4_BURP1 Gp58 OS=Burkholderia pseudomallei (strain... 37 0.90
tr|B8MCA6|B8MCA6_9EURO Monooxygenase, putative OS=Talaromyces st... 35 3.4
tr|A8Y4F1|A8Y4F1_CAEBR Putative uncharacterized protein OS=Caeno... 33 7.7
tr|A8XK12|A8XK12_CAEBR CBR-SPR-3 protein OS=Caenorhabditis brigg... 33 9.8
tr|Q5B628|Q5B628_EMENI Putative uncharacterized protein OS=Emeri... 33 10.0
tr|B0D9R3|B0D9R3_LACBS Predicted protein OS=Laccaria bicolor (st... 33 10.0

>tr|Q3JTN4|Q3JTN4_BURP1 Gp58 OS=Burkholderia pseudomallei (strain
1710b) GN=BURPS1710b_1666 PE=4 SV=1
Length = 384

Score = 36.6 bits (83), Expect = 0.90
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Frame = +1

Query: 205 NWAVNKP*NSLSPSSQKDHLCLPSATTLCGNHL-QPYIDYTELDAILEPSPL 357
+W +NK SLS ++ HLC +++T CG QP + ELDAI++ PL
Sbjct: 45 DWRINK---SLSRVNKSLHLCGRASSTACGEDADQPVNSWEELDAIMKIQPL 93


>tr|B8MCA6|B8MCA6_9EURO Monooxygenase, putative OS=Talaromyces
stipitatus ATCC 10500 GN=TSTA_122820 PE=4 SV=1
Length = 417

Score = 34.7 bits (78), Expect = 3.4
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +1

Query: 67 EHVYRVALSSIPLLMIKENLLKQPNNYPELLSHHP 171
+H+YRV+ S +P L +E +QPN Y E+L +P
Sbjct: 232 DHLYRVSYSEVPGLTPEEYKRRQPNRYREILPGNP 266


>tr|A8Y4F1|A8Y4F1_CAEBR Putative uncharacterized protein
OS=Caenorhabditis briggsae GN=CBG23225 PE=4 SV=2
Length = 791

Score = 33.5 bits (75), Expect = 7.7
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 4/85 (4%)
Frame = +1

Query: 190 RETTPNWAVNKP*NSLSPSSQK--DHLCLPSATTLCGNHLQPYIDYTELDAILEPSPLI- 360
R TTP + + + S SS D + +PS ++ PYI E+ + +P +
Sbjct: 277 RVTTPRYYASSYPSVPSSSSNSIYDRITIPSIPAT-SSYRNPYIHKIEVTSSTYRTPNVQ 335

Query: 361 -TVAKHRGAEYHPKQHSTPHAPLHS 432
T + HR +H QH+ H +HS
Sbjct: 336 PTTSTHRQHHHHHHQHNRTHIDIHS 360


>tr|A8XK12|A8XK12_CAEBR CBR-SPR-3 protein OS=Caenorhabditis briggsae
GN=Cbr-spr-3 PE=4 SV=2
Length = 2228

Score = 33.1 bits (74), Expect = 9.8
Identities = 32/108 (29%), Positives = 44/108 (40%), Gaps = 5/108 (4%)
Frame = +3

Query: 198 NSQLGCQ*TLKFPITFLPKGPSLPAIRYHTLWEPPPALY*LHRAGRNS*TFSPHHSSKTQ 377
NS+ G + K P + P+ S P + T EPPP LY SP T
Sbjct: 1498 NSESGSNESSKPPTSGAPERQSFPILESPTSSEPPPQLY-----PEPEQQLSPVPKLPTS 1552

Query: 378 GCGVPSKTAFNAACSFAFDLPMLNPRIHFEFS-----TQPLNKEPSGT 506
K++++ A +F P L+P E S Q LN EP G+
Sbjct: 1553 SDLDLQKSSYSDAPTFPETAPRLSPEPERESSPVLEPQQYLNLEPPGS 1600


>tr|Q5B628|Q5B628_EMENI Putative uncharacterized protein
OS=Emericella nidulans GN=AN4002.2 PE=4 SV=1
Length = 573

Score = 33.1 bits (74), Expect = 10.0
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1

Query: 58 LLHEHVYRVALSSIPLLMIKENLLKQPNNYPELLSHHP 171
+ ++ +YRV IP L +E + +QP Y E+L HP
Sbjct: 388 ITNDGLYRVTYKDIPNLSREEYISRQPKRYEEILPSHP 425


>tr|B0D9R3|B0D9R3_LACBS Predicted protein OS=Laccaria bicolor
(strain S238N-H82) GN=LACBIDRAFT_296996 PE=4 SV=1
Length = 241

Score = 33.1 bits (74), Expect = 10.0
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 4/44 (9%)
Frame = +2

Query: 200 LPTGLSINLKIPYH----LPPKRTIFACHPLPHFVGTTSSLILI 319
LP+ L +L +P H LPPK++ F HPLP G S+ IL+
Sbjct: 152 LPSHLCPDLSLPTHVLNSLPPKKSCFPVHPLPS-SGPNSNTILL 194