BP914685
Clone id YMU001_000061_G05
Library
Length 300
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000061_G05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TGTTTATAAAACAATTTTAATGCTATGCGAGGAATGGATCAGATCTAGTTTGACGCGTGG
AACAAAGAAAATGGCTTTTCTAGATGGAGCAATAAAATACATGCAATGGGCAATTCACCT
TCAAAAGGAGAAAACTGAGCCTAGAGATTTGCCATGGTCAATCTATGTGGTGAGCCTACA
AATGGAAGGCAATCTCTACTTGATGCGCCACTTCAATAATAAAGTGCCTATTGGCTTATG
TGTTTTAGATATGACAAAAAACGTTGGAGGTAATTTGAAGTGGAGTGAGGAGACATTTAA
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914685|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_G05.
(300 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id A5AVG5
Definition tr|A5AVG5|A5AVG5_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 81
Score (bit) 35.8
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914685|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_G05.
(300 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A5AVG5|A5AVG5_VITVI Putative uncharacterized protein OS=Vitis... 36 1.1
tr|B0CRM8|B0CRM8_LACBS Histone deacetylase complex, SIN3 compone... 35 2.4
tr|A2EX85|A2EX85_TRIVA Putative uncharacterized protein OS=Trich... 33 5.4

>tr|A5AVG5|A5AVG5_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_029939 PE=4 SV=1
Length = 520

Score = 35.8 bits (81), Expect = 1.1
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Frame = +2

Query: 65 KKMAFLDGAIKYMQWAIHLQKEKTEPRDLPWSIYVVSLQMEGNLY-------LMRHFNNK 223
+K+ +D AI+ + A HL+ E E L + YV+S + + + Y L+R
Sbjct: 45 QKLLLID-AIQRLGVAYHLESEIDEALQLVFDGYVISAEEDDDAYTAALRLRLLRQQGYN 103

Query: 224 VPIGLCVLDMTKNVGGNLKWS 286
V G CV + KN GN K S
Sbjct: 104 VSCGECVFNKLKNSEGNFKES 124


>tr|B0CRM8|B0CRM8_LACBS Histone deacetylase complex, SIN3 component
OS=Laccaria bicolor (strain S238N-H82) GN=SNT16201 PE=4
SV=1
Length = 1281

Score = 34.7 bits (78), Expect = 2.4
Identities = 20/56 (35%), Positives = 30/56 (53%)
Frame = +2

Query: 68 KMAFLDGAIKYMQWAIHLQKEKTEPRDLPWSIYVVSLQMEGNLYLMRHFNNKVPIG 235
KM F D Y Q+ ++ K++ D P I VS+ GN YL++ FN +P+G
Sbjct: 105 KMQFQDKPEVYNQFLDIMKDFKSQVIDTPGVIQRVSMLFNGNPYLIQGFNTFLPLG 160


>tr|A2EX85|A2EX85_TRIVA Putative uncharacterized protein
OS=Trichomonas vaginalis G3 GN=TVAG_466040 PE=4 SV=1
Length = 462

Score = 33.5 bits (75), Expect = 5.4
Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Frame = +2

Query: 26 CEEWIRSS----LTRGTKKMAFLDGAIKYMQWAIHLQKEKTEPRDLPWSIYVVSLQMEGN 193
C +++R+ +TR + +FL G M + Q P D+ S + S +++
Sbjct: 160 CFKYLRTEFKYEITRRCLQKSFLGGNADIMHECLKSQM----PDDMCMSYAIESYRIDFV 215

Query: 194 LYLMRHFNNKVPIGLC-----------VLDMTKN 262
LYLM FN ++P+ +C LD TKN
Sbjct: 216 LYLMSTFNIRIPLSVCSKFYFFQGFFIYLDQTKN 249