BP914688
Clone id YMU001_000061_G09
Library
Length 489
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000061_G09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAACTCTAAAATAATCCTTTGAACAATTAACCCTTGCTGTGTATTTACATGCCTCCAGCT
ATTGGAGAGTCCCAATCAAAGTTGGGTTTTGAAAAGACTTCATACTCCACAGGACCATTC
ACAGTACTGTCGATTGAACCAAGGCTTCAAAAGCTGCTACATCGAAACCCATCACTGGGG
GGGCATAAAAGCTTTTCAAGTTCCATACTTGGCACAAACAAGCACAGCTAGTGCTAGAGT
GCACAAAAACTGAAGCTTCTCTTTGTCCCCTCTAACGTAGAAAAAGTAAAGCATGGCAAA
AATGTACAGCACAATGCAGATTTTCATGACCCTGAGCACAGTGCCCAAAAAGCTTCCCAT
CATTTGTCGCTGCAAAACCACGAGCTCTGTACATGAAGAGAAAATTATACTTGTCTACTA
TGTACCTATAGCCAAAGTAACAGGCCGCAATGGGCACTATTGTGGGGACAAAAGAAGAAT
ATATGAGAG
■■Homology search results ■■ -
sp_hit_id Q19746
Definition sp|Q19746|INX3_CAEEL Innexin-3 OS=Caenorhabditis elegans
Align length 32
Score (bit) 33.9
E-value 0.38
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914688|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_G09.
(471 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q19746|INX3_CAEEL Innexin-3 OS=Caenorhabditis elegans GN=inx-... 34 0.38
sp|Q8IU29|MOCOS_BOMMO Molybdenum cofactor sulfurase OS=Bombyx mo... 30 6.9
sp|Q91WD7|KI18A_MOUSE Kinesin-like protein KIF18A OS=Mus musculu... 30 7.1
sp|Q8CIZ8|VWF_MOUSE von Willebrand factor OS=Mus musculus GN=Vwf... 29 9.1
sp|P00533|EGFR_HUMAN Epidermal growth factor receptor OS=Homo sa... 29 9.3
sp|O73700|CAC1D_CHICK Voltage-dependent L-type calcium channel s... 29 9.3

>sp|Q19746|INX3_CAEEL Innexin-3 OS=Caenorhabditis elegans GN=inx-3
PE=1 SV=2
Length = 420

Score = 33.9 bits (76), Expect = 0.38
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +1

Query: 289 KHGKNVQHNADFHDPEHSAQKASHHLSLQNHE 384
KHG+N+QHN DFH HS + S L +HE
Sbjct: 370 KHGENLQHNRDFHH-GHSTKSTSPGLEEGHHE 400


>sp|Q8IU29|MOCOS_BOMMO Molybdenum cofactor sulfurase OS=Bombyx mori
GN=og PE=2 SV=1
Length = 822

Score = 29.6 bits (65), Expect = 6.9
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +2

Query: 323 FMTLSTVPKKLPIICRCKTTSSVHEEKIILVYYVPIAKVTGRNGH 457
+ T V K + +ICRC + ++K I+ ++V K+ NG+
Sbjct: 460 YNTFEDVDKFVNMICRCFVNAKARKQKRIINHFVETPKIKHYNGN 504


>sp|Q91WD7|KI18A_MOUSE Kinesin-like protein KIF18A OS=Mus musculus
GN=Kif18a PE=2 SV=1
Length = 886

Score = 29.6 bits (65), Expect = 7.1
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +1

Query: 358 HHLSLQNHELCT*RENYTCLLCTYSQSNRPQWALL 462
HHL LQN EL T + T L C Q ++ A+L
Sbjct: 539 HHLHLQNKELKTQMAHMTALACLQEQQHKQTEAVL 573


>sp|Q8CIZ8|VWF_MOUSE von Willebrand factor OS=Mus musculus GN=Vwf PE=1
SV=2
Length = 2813

Score = 29.3 bits (64), Expect = 9.1
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +3

Query: 234 LECTKTEASLCPL*RRKSKAWQKCTAQC 317
LEC KT CP+ R+ K+ +C +C
Sbjct: 2617 LECRKTTCEACPMGYREEKSQGECCGRC 2644


>sp|P00533|EGFR_HUMAN Epidermal growth factor receptor OS=Homo sapiens
GN=EGFR PE=1 SV=2
Length = 1210

Score = 29.3 bits (64), Expect = 9.3
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = +1

Query: 313 NADFHDPEHSAQKASHHLSLQN 378
N+ F P H AQK SH +SL N
Sbjct: 1148 NSTFDSPAHWAQKGSHQISLDN 1169


>sp|O73700|CAC1D_CHICK Voltage-dependent L-type calcium channel
subunit alpha-1D OS=Gallus gallus GN=CACNA1D PE=2 SV=1
Length = 2190

Score = 29.3 bits (64), Expect = 9.3
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1

Query: 271 SNVEKVKHGKNVQHNADFHDPEHSAQKASHHLSLQNHE 384
+NV KV HGK+ A+F EH ++ H S +HE
Sbjct: 1790 ANVSKVVHGKH----ANFGSHEHRSENGYHSYSRADHE 1823


tr_hit_id A7R110
Definition tr|A7R110|A7R110_VITVI Chromosome chr4 scaffold_333, whole genome shotgun sequence (Fragment) OS=Vitis vinifera
Align length 63
Score (bit) 73.2
E-value 5.0e-21
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP914688|Adiantum capillus-veneris mRNA, clone:
YMU001_000061_G09.
(471 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7R110|A7R110_VITVI Chromosome chr4 scaffold_333, whole genom... 73 5e-21
tr|Q9SZT4|Q9SZT4_ARATH Putative uncharacterized protein AT4g3587... 70 1e-18
tr|Q1KSB7|Q1KSB7_SORBI Putative uncharacterized protein OS=Sorgh... 72 7e-18
tr|Q10S28|Q10S28_ORYSJ Os03g0137400 protein OS=Oryza sativa subs... 69 4e-17
tr|B8AMU4|B8AMU4_ORYSI Putative uncharacterized protein OS=Oryza... 69 4e-17
tr|A3ADW7|A3ADW7_ORYSJ Putative uncharacterized protein OS=Oryza... 68 3e-10
tr|B6KJQ9|B6KJQ9_TOXGO Putative uncharacterized protein OS=Toxop... 37 0.65
tr|B6XSW8|B6XSW8_9BIFI Putative uncharacterized protein OS=Bifid... 35 2.4
tr|Q1M5K3|Q1M5K3_RHIL3 Putative exonuclease/polymerase OS=Rhizob... 35 2.5
tr|A1A3E7|A1A3E7_BIFAA Probable solute binding protein of ABC tr... 34 4.2
tr|A7A752|A7A752_BIFAD Putative uncharacterized protein OS=Bifid... 34 4.2
tr|Q8I4T2|Q8I4T2_PLAF7 Putative uncharacterized protein OS=Plasm... 33 5.5
tr|Q7R9X9|Q7R9X9_PLAYO Putative uncharacterized protein PY06730 ... 33 5.5
tr|Q4Z2S4|Q4Z2S4_PLABE Putative uncharacterized protein (Fragmen... 33 5.5
tr|Q4XXZ8|Q4XXZ8_PLACH Putative uncharacterized protein OS=Plasm... 33 5.5
tr|B3LDE7|B3LDE7_PLAKH Putative uncharacterized protein OS=Plasm... 33 5.5
tr|A5K905|A5K905_PLAVI Putative uncharacterized protein OS=Plasm... 33 5.5
tr|B3Q1V9|B3Q1V9_RHIE6 Probable polymerase protein, epsilon subu... 33 7.1
tr|B4LJM0|B4LJM0_DROVI GJ22131 OS=Drosophila virilis GN=GJ22131 ... 33 7.1
tr|Q8IK98|Q8IK98_PLAF7 Putative uncharacterized protein OS=Plasm... 33 9.3
tr|Q567L2|Q567L2_DANRE Sox9a protein OS=Danio rerio GN=sox9a PE=... 33 9.3
tr|Q1N5R6|Q1N5R6_9GAMM Putative uncharacterized protein OS=Ocean... 33 9.3
tr|B0J8W8|B0J8W8_RHILT Exonuclease RNase T and DNA polymerase II... 33 9.3

>tr|A7R110|A7R110_VITVI Chromosome chr4 scaffold_333, whole genome
shotgun sequence (Fragment) OS=Vitis vinifera
GN=GSVIVT00011731001 PE=4 SV=1
Length = 883

Score = 73.2 bits (178), Expect(2) = 5e-21
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = -3

Query: 466 PTIVPIAACYFGYRYIVDKYNFLFMYRARGFAATNDGKLFGHCAQGHENLHCAVHFCHAL 287
P +VP+ A YFGYRY+VDKYNFLF+YR RGF A NDGKL + + C + FC L
Sbjct: 755 PLVVPVGAIYFGYRYVVDKYNFLFVYRVRGFPAGNDGKLM-------DTVLCIMRFCVDL 807

Query: 286 LFL 278
L
Sbjct: 808 FLL 810



Score = 51.2 bits (121), Expect(2) = 5e-21
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = -2

Query: 194 KLLCPPSDGFRCSSF*SLGSIDSTVNGPVEYEVFSKPNFDWDS 66
KLL +D F+ + + +IDS V GP++YEVFS+PNFDWD+
Sbjct: 838 KLLPSSNDSFQPALLEGIQTIDSVVEGPIDYEVFSQPNFDWDT 880



Score = 40.8 bits (94), Expect = 0.034
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = -1

Query: 357 GSFLGTVLRVMKICIVLYIFAMLYFFYVRGDKEKLQ 250
G + TVL +M+ C+ L++ +ML FF V+GD KLQ
Sbjct: 791 GKLMDTVLCIMRFCVDLFLLSMLMFFSVQGDSTKLQ 826


>tr|Q9SZT4|Q9SZT4_ARATH Putative uncharacterized protein AT4g35870
(AT4g35870/F4B14_140) OS=Arabidopsis thaliana
GN=AT4g35870 PE=2 SV=1
Length = 817

Score = 69.7 bits (169), Expect(2) = 1e-18
Identities = 31/57 (54%), Positives = 39/57 (68%)
Frame = -3

Query: 466 PTIVPIAACYFGYRYIVDKYNFLFMYRARGFAATNDGKLFGHCAQGHENLHCAVHFC 296
P +VP+ A YFGYRYIVDKYNFL++YR RGF A N+GKL + + C + FC
Sbjct: 688 PLVVPVGAVYFGYRYIVDKYNFLYVYRVRGFPAGNEGKLM-------DTVLCIMRFC 737



Score = 46.6 bits (109), Expect(2) = 1e-18
Identities = 19/43 (44%), Positives = 30/43 (69%)
Frame = -2

Query: 194 KLLCPPSDGFRCSSF*SLGSIDSTVNGPVEYEVFSKPNFDWDS 66
KLL +D + + S+ ++DS ++GPV+YE +S PNFDWD+
Sbjct: 771 KLLPSDTDRYHPALLRSIQTVDSIIDGPVDYEAYSHPNFDWDT 813



Score = 42.4 bits (98), Expect = 0.012
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = -1

Query: 357 GSFLGTVLRVMKICIVLYIFAMLYFFYVRGDKEKLQ 250
G + TVL +M+ C+ LY+ +ML FF V+GD KLQ
Sbjct: 724 GKLMDTVLCIMRFCVDLYLVSMLLFFSVKGDSTKLQ 759


>tr|Q1KSB7|Q1KSB7_SORBI Putative uncharacterized protein OS=Sorghum
bicolor PE=4 SV=1
Length = 795

Score = 71.6 bits (174), Expect(2) = 7e-18
Identities = 32/57 (56%), Positives = 39/57 (68%)
Frame = -3

Query: 466 PTIVPIAACYFGYRYIVDKYNFLFMYRARGFAATNDGKLFGHCAQGHENLHCAVHFC 296
P +VP+ A YFGYRY+VDKYNFLF+YR RGF A NDGKL + + C + FC
Sbjct: 667 PLVVPVGATYFGYRYLVDKYNFLFVYRVRGFPAGNDGKLM-------DRVLCIMQFC 716



Score = 42.0 bits (97), Expect(2) = 7e-18
Identities = 19/42 (45%), Positives = 29/42 (69%)
Frame = -2

Query: 194 KLLCPPSDGFRCSSF*SLGSIDSTVNGPVEYEVFSKPNFDWD 69
KLL SD F+ S + +++S V+GP +YEVFS+P+ DW+
Sbjct: 750 KLLPSRSDRFQPSLLEGMQTVNSFVDGPTDYEVFSQPDLDWN 791



Score = 38.9 bits (89), Expect = 0.13
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = -1

Query: 357 GSFLGTVLRVMKICIVLYIFAMLYFFYVRGDKEKLQ 250
G + VL +M+ C++ ++ AML FF V+GD KLQ
Sbjct: 703 GKLMDRVLCIMQFCVIFFLAAMLLFFAVQGDSMKLQ 738


>tr|Q10S28|Q10S28_ORYSJ Os03g0137400 protein OS=Oryza sativa subsp.
japonica GN=Os03g0137400 PE=2 SV=1
Length = 792

Score = 69.3 bits (168), Expect(2) = 4e-17
Identities = 32/57 (56%), Positives = 38/57 (66%)
Frame = -3

Query: 466 PTIVPIAACYFGYRYIVDKYNFLFMYRARGFAATNDGKLFGHCAQGHENLHCAVHFC 296
P VP+ A YFGYRY+VDKYNFLF+YR RGF A NDGKL + + C + FC
Sbjct: 664 PLTVPVGAVYFGYRYLVDKYNFLFIYRVRGFPAGNDGKLM-------DMVICIMQFC 713



Score = 41.6 bits (96), Expect(2) = 4e-17
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = -2

Query: 194 KLLCPPSDGFRCSSF*SLGSIDSTVNGPVEYEVFSKPNFDW 72
KLL SD F+ S + +++S V+GP +YEVFS+P+ DW
Sbjct: 747 KLLPSRSDRFQPSLLEGMQTVNSFVDGPTDYEVFSQPDLDW 787



Score = 38.1 bits (87), Expect = 0.22
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -1

Query: 357 GSFLGTVLRVMKICIVLYIFAMLYFFYVRGDKEKLQ 250
G + V+ +M+ C++ ++ AML FF V+GD KLQ
Sbjct: 700 GKLMDMVICIMQFCVIFFLVAMLLFFAVQGDPMKLQ 735


>tr|B8AMU4|B8AMU4_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_09924 PE=4 SV=1
Length = 792

Score = 69.3 bits (168), Expect(2) = 4e-17
Identities = 32/57 (56%), Positives = 38/57 (66%)
Frame = -3

Query: 466 PTIVPIAACYFGYRYIVDKYNFLFMYRARGFAATNDGKLFGHCAQGHENLHCAVHFC 296
P VP+ A YFGYRY+VDKYNFLF+YR RGF A NDGKL + + C + FC
Sbjct: 664 PLTVPVGAVYFGYRYLVDKYNFLFIYRVRGFPAGNDGKLM-------DMVICIMQFC 713



Score = 41.6 bits (96), Expect(2) = 4e-17
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = -2

Query: 194 KLLCPPSDGFRCSSF*SLGSIDSTVNGPVEYEVFSKPNFDW 72
KLL SD F+ S + +++S V+GP +YEVFS+P+ DW
Sbjct: 747 KLLPSRSDRFQPSLLEGMQTVNSFVDGPTDYEVFSQPDLDW 787



Score = 38.1 bits (87), Expect = 0.22
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = -1

Query: 357 GSFLGTVLRVMKICIVLYIFAMLYFFYVRGDKEKLQ 250
G + V+ +M+ C++ ++ AML FF V+GD KLQ
Sbjct: 700 GKLMDMVICIMQFCVIFFLVAMLLFFAVQGDPMKLQ 735


>tr|A3ADW7|A3ADW7_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_008989 PE=4 SV=1
Length = 1194

Score = 67.8 bits (164), Expect = 3e-10
Identities = 29/39 (74%), Positives = 32/39 (82%)
Frame = -3

Query: 466 PTIVPIAACYFGYRYIVDKYNFLFMYRARGFAATNDGKL 350
P VP+ A YFGYRY+VDKYNFLF+YR RGF A NDGKL
Sbjct: 650 PLTVPVGAVYFGYRYLVDKYNFLFIYRVRGFPAGNDGKL 688


>tr|B6KJQ9|B6KJQ9_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_032120 PE=4 SV=1
Length = 489

Score = 36.6 bits (83), Expect = 0.65
Identities = 14/25 (56%), Positives = 19/25 (76%)
Frame = -3

Query: 469 VPTIVPIAACYFGYRYIVDKYNFLF 395
VP I+P+ YF +RY VDKYN++F
Sbjct: 348 VPLILPLGILYFCFRYQVDKYNYMF 372


>tr|B6XSW8|B6XSW8_9BIFI Putative uncharacterized protein
OS=Bifidobacterium catenulatum DSM 16992 GN=BIFCAT_00287
PE=4 SV=1
Length = 520

Score = 34.7 bits (78), Expect = 2.4
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +1

Query: 67 ESQSKLGFEKTSYSTGPFTVLSIEPRLQKLLHRNPSLGGHKSFSSSI 207
+ +SK + K S +GPFTV S+ + Q +L RN S G K+ +S I
Sbjct: 198 DEESKANYSKKSVGSGPFTVASMS-KSQIVLQRNDSYWGTKAAASQI 243


>tr|Q1M5K3|Q1M5K3_RHIL3 Putative exonuclease/polymerase OS=Rhizobium
leguminosarum bv. viciae (strain 3841) GN=pRL110533 PE=4
SV=1
Length = 326

Score = 34.7 bits (78), Expect = 2.5
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = -3

Query: 391 YRARGFAATNDGKLFGHCAQGHENLHCAVHFCHALLFLR*RGQRE 257
+ ARGF T G L G HE H AV CHALL + R QR+
Sbjct: 192 WSARGFEGTKLGYLVGQAGYFHEG-HRAVDDCHALLEILDREQRD 235


>tr|A1A3E7|A1A3E7_BIFAA Probable solute binding protein of ABC
transporter system OS=Bifidobacterium adolescentis
(strain ATCC 15703 / DSM 20083) GN=BAD_1449 PE=4 SV=1
Length = 515

Score = 33.9 bits (76), Expect = 4.2
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1

Query: 67 ESQSKLGFEKTSYSTGPFTVLSIEPRLQKLLHRNPSLGGHKSFSSSI 207
+++SK + K++ +GPFTV S + Q +L RN S G K+ SS +
Sbjct: 193 DAESKTNYAKSAVGSGPFTV-STADQSQIVLQRNDSYWGKKAASSQV 238