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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914705
Clone id YMU001_000062_A03
Library
Length 568
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000062_A03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AGAAGAGCTCCATGGTTTCATTCAAAACCCATCTTGAAATCTTCCTTCAAGGGAATGAGA
ATGACGATGCTCCGGATTTCGAAGTCAAGGGCAACTTCTTCCAGCGCGAGGCACAGATCT
TCCACAAGGACCAGCTCATAGCAGAGGTGAAGAGAAAGTACATAGTTGGAAATGTGCTCT
TGGACAAGCACACATTCAGTGTTGTGGTCTTCCCTAATGTGGACCAAGCTTTTGTGGCAG
CTCTTGTGATCATCATGGACCGTATCCATGAGGACTAGATGGCTTTGACAGCCCCGCATG
AGCAAGCCCGCCCTTCGTCTTCATCCTGTCCTGCCACCATCTACCTAAGGATGTCCCCTT
GTTTTTGCATAAGCATTCCTTCACCGCCATATCCATCTTTCTGTTTGTGGTTTCCATTGC
AAGTAGCTTAGTTTGTAAGTTTGACCCCTAGTCAAGGTAACTGGTTTTTGTTACATCATT
TTGCTTTGCTTTTCTTGAAGCTGCCTATATGGTGGTCCTCCAATGCAATGCTCTTATATC
CCGAATGTGGAGTGTAAGTTGCACGATT
■■Homology search results ■■ -
sp_hit_id Q9LZX1
Definition sp|Q9LZX1|Y5175_ARATH UPF0706 protein At5g01750 OS=Arabidopsis thaliana
Align length 93
Score (bit) 82.0
E-value 2.0e-15
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914705|Adiantum capillus-veneris mRNA, clone:
YMU001_000062_A03.
         (568 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LZX1|Y5175_ARATH UPF0706 protein At5g01750 OS=Arabidopsis t...    82   2e-15
sp|Q09165|DIG1_CAEEL Mesocentin OS=Caenorhabditis elegans GN=dig...    33   1.3  
sp|Q9BYQ2|KRA94_HUMAN Keratin-associated protein 9-4 OS=Homo sap...    33   1.3  
sp|Q9BYQ3|KRA93_HUMAN Keratin-associated protein 9-3 OS=Homo sap...    30   6.4  
sp|Q9BYQ4|KRA92_HUMAN Keratin-associated protein 9-2 OS=Homo sap...    30   6.4  
sp|A8MXZ3|KR923_HUMAN Putative keratin-associated protein 9-2-li...    30   6.4  
sp|P43218|GIPR_MESAU Gastric inhibitory polypeptide receptor OS=...    30   8.4  

>sp|Q9LZX1|Y5175_ARATH UPF0706 protein At5g01750 OS=Arabidopsis
           thaliana GN=At5g01750 PE=1 SV=1
          Length = 217

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 38/93 (40%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
 Frame = +3

Query: 3   KSSMVSFKTHLEIFLQGNENDDAPDFEVKGNFFQREAQIF--HKDQLIAEVKRKYIVGNV 176
           +SSM+  KT L++FL  N+++   DF VKG++ +R   ++    D ++A++ RK+ V +V
Sbjct: 121 RSSMLQLKTKLDVFLGHNKDEKRCDFRVKGSWLERSCVVYAGESDAIVAQMHRKHTVQSV 180

Query: 177 LLDKHTFSVVVFPNVDQAFVAALVIIMDRIHED 275
            L K  FSV V+PNVD AF+A+LV+I+D ++ +
Sbjct: 181 FLGKDNFSVTVYPNVDYAFIASLVVILDDVNRE 213


>sp|Q09165|DIG1_CAEEL Mesocentin OS=Caenorhabditis elegans GN=dig-1 PE=1
             SV=2
          Length = 13100

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = +3

Query: 171   NVLLDKHTFSVVVFPN--VDQAFVAALVIIMDRIHED*MALTAPHEQARPSSSSC 329
             N L   HT++V V  N  VD +   A+    D +H D    TAP +  +PS SSC
Sbjct: 12875 NELPSDHTYTVCVMTNERVDNSTALAIDKNCDSLHID-QNTTAPEDYVKPSPSSC 12928


>sp|Q9BYQ2|KRA94_HUMAN Keratin-associated protein 9-4 OS=Homo
           sapiens GN=KRTAP9-4 PE=2 SV=1
          Length = 154

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +2

Query: 173 CALGQAHIQCCGLP*CGPSFCGSSCD 250
           C        CC  P C P+ CGSSCD
Sbjct: 66  CVTSCCQPSCCSTPCCQPTCCGSSCD 91


>sp|Q9BYQ3|KRA93_HUMAN Keratin-associated protein 9-3 OS=Homo
           sapiens GN=KRTAP9-3 PE=1 SV=1
          Length = 159

 Score = 30.4 bits (67), Expect = 6.4
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 173 CALGQAHIQCCGLP*CGPSFCGSSC 247
           C        CC  P C P+ CGSSC
Sbjct: 66  CVTSCCQPSCCSTPCCQPTCCGSSC 90


>sp|Q9BYQ4|KRA92_HUMAN Keratin-associated protein 9-2 OS=Homo
           sapiens GN=KRTAP9-2 PE=1 SV=2
          Length = 174

 Score = 30.4 bits (67), Expect = 6.4
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 173 CALGQAHIQCCGLP*CGPSFCGSSC 247
           C        CC  P C P+ CGSSC
Sbjct: 71  CVTSCCQPSCCSTPCCQPTCCGSSC 95


>sp|A8MXZ3|KR923_HUMAN Putative keratin-associated protein 9-2-like
           3 OS=Homo sapiens PE=3 SV=1
          Length = 250

 Score = 30.4 bits (67), Expect = 6.4
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +2

Query: 173 CALGQAHIQCCGLP*CGPSFCGSSC 247
           C        CC  P C P+ CGSSC
Sbjct: 71  CVASCCQPSCCSTPCCQPTCCGSSC 95


>sp|P43218|GIPR_MESAU Gastric inhibitory polypeptide receptor
           OS=Mesocricetus auratus GN=GIPR PE=2 SV=1
          Length = 462

 Score = 30.0 bits (66), Expect = 8.4
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 80  RSQGQLLPARGTDLPQGPAHSRGEEKVHSW 169
           RS  + +P  G+ LP GP H  GEE + S+
Sbjct: 432 RSAPREVPITGSTLPSGPLHGPGEEVLESY 461
tr_hit_id B6T7N7
Definition tr|B6T7N7|B6T7N7_MAIZE Putative uncharacterized protein OS=Zea mays
Align length 93
Score (bit) 87.8
E-value 4.0e-16
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914705|Adiantum capillus-veneris mRNA, clone:
YMU001_000062_A03.
         (568 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6T7N7|B6T7N7_MAIZE Putative uncharacterized protein OS=Zea m...    88   4e-16
tr|B6SU53|B6SU53_MAIZE Putative uncharacterized protein OS=Zea m...    86   1e-15
tr|A9NL98|A9NL98_PICSI Putative uncharacterized protein OS=Picea...    84   7e-15
tr|A7QFJ2|A7QFJ2_VITVI Chromosome chr8 scaffold_88, whole genome...    83   9e-15
tr|A9NZT7|A9NZT7_PICSI Putative uncharacterized protein OS=Picea...    82   2e-14
tr|A2YJM7|A2YJM7_ORYSI Putative uncharacterized protein OS=Oryza...    80   6e-14
tr|A9T2I3|A9T2I3_PHYPA Predicted protein OS=Physcomitrella paten...    79   2e-13
tr|A7QFJ1|A7QFJ1_VITVI Chromosome chr8 scaffold_88, whole genome...    78   3e-13
tr|Q84YM9|Q84YM9_ORYSJ Os07g0230700 protein OS=Oryza sativa subs...    77   5e-13
tr|A3BI01|A3BI01_ORYSJ Putative uncharacterized protein OS=Oryza...    77   5e-13
tr|A9S6M4|A9S6M4_PHYPA Predicted protein OS=Physcomitrella paten...    74   6e-12
tr|A9T0M4|A9T0M4_PHYPA Predicted protein OS=Physcomitrella paten...    69   2e-10
tr|Q9SF24|Q9SF24_ARATH F26K24.3 protein OS=Arabidopsis thaliana ...    65   3e-09
tr|B6TXU6|B6TXU6_MAIZE Putative uncharacterized protein OS=Zea m...    64   6e-09
tr|Q10BI2|Q10BI2_ORYSJ Os03g0816800 protein OS=Oryza sativa subs...    60   6e-08
tr|A9SW48|A9SW48_PHYPA Predicted protein (Fragment) OS=Physcomit...    58   3e-07
tr|A9T2I4|A9T2I4_PHYPA Predicted protein OS=Physcomitrella paten...    56   1e-06
tr|Q9LQ36|Q9LQ36_ARATH F14M2.3 protein OS=Arabidopsis thaliana G...    55   3e-06
tr|Q9ZQR8|Q9ZQR8_ARATH Putative uncharacterized protein At2g1456...    55   3e-06
tr|Q8VYP1|Q8VYP1_ARATH Putative uncharacterized protein At2g1456...    55   3e-06
tr|B8AMA3|B8AMA3_ORYSI Putative uncharacterized protein OS=Oryza...    54   5e-06
tr|Q9LYM3|Q9LYM3_ARATH Putative uncharacterized protein F18O21_1...    53   1e-05
tr|Q10BI3|Q10BI3_ORYSJ Expressed protein OS=Oryza sativa subsp. ...    53   1e-05
tr|Q0DMC9|Q0DMC9_ORYSJ Os03g0816700 protein (Fragment) OS=Oryza ...    53   1e-05
tr|Q9LSQ1|Q9LSQ1_ARATH Emb|CAB82745.1 OS=Arabidopsis thaliana GN...    52   2e-05
tr|A7NY47|A7NY47_VITVI Chromosome chr6 scaffold_3, whole genome ...    51   4e-05
tr|A9NZ78|A9NZ78_PICSI Putative uncharacterized protein OS=Picea...    50   9e-05
tr|A7Q9T4|A7Q9T4_VITVI Chromosome chr8 scaffold_68, whole genome...    49   1e-04
tr|A5BRT0|A5BRT0_VITVI Putative uncharacterized protein OS=Vitis...    49   1e-04
tr|B3H5L1|B3H5L1_ARATH Uncharacterized protein At3g10986.1 OS=Ar...    48   3e-04

>tr|B6T7N7|B6T7N7_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 210

 Score = 87.8 bits (216), Expect = 4e-16
 Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
 Frame = +3

Query: 3   KSSMVSFKTHLEIFLQGNENDDAPDFEVKGNFFQREAQIF--HKDQLIAEVKRKYIVGNV 176
           KSS+   KT ++IFL  N    A DF++KG++F+R    +  +   +IA++ R++ V NV
Sbjct: 115 KSSIFQLKTEMDIFLASNTAQQACDFKIKGSYFERSCAFYLGNSSSMIAQMNRQFTVTNV 174

Query: 177 LLDKHTFSVVVFPNVDQAFVAALVIIMDRIHED 275
           LL + TF V VFP+VD  FVAALV+I+D IH +
Sbjct: 175 LLGRDTFGVTVFPHVDYVFVAALVVILDEIHRE 207


>tr|B6SU53|B6SU53_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 207

 Score = 86.3 bits (212), Expect = 1e-15
 Identities = 41/93 (44%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
 Frame = +3

Query: 3   KSSMVSFKTHLEIFLQGNENDDAPDFEVKGNFFQREAQIF--HKDQLIAEVKRKYIVGNV 176
           KSS+   KT ++IFL  N      DF++KG++F+R    +  +   +IA++ R++ V NV
Sbjct: 112 KSSIFQLKTEMDIFLASNTAQQVCDFKIKGSYFERSCAFYLGNSSSMIAQMNRQFTVTNV 171

Query: 177 LLDKHTFSVVVFPNVDQAFVAALVIIMDRIHED 275
           LL + TF V VFP+VD  FVAALV+I+D IH +
Sbjct: 172 LLGRDTFGVTVFPHVDYVFVAALVVILDEIHRE 204


>tr|A9NL98|A9NL98_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 222

 Score = 83.6 bits (205), Expect = 7e-15
 Identities = 39/91 (42%), Positives = 62/91 (68%)
 Frame = +3

Query: 3   KSSMVSFKTHLEIFLQGNENDDAPDFEVKGNFFQREAQIFHKDQLIAEVKRKYIVGNVLL 182
           KS++   +T L ++L  N + D   F+VKG+FF+R   I+    +IAE++RKY V  VL+
Sbjct: 125 KSTLFQLRTSLNVYLGNNSHSD---FKVKGSFFERSCTIYQGRTVIAEMRRKYTVSQVLM 181

Query: 183 DKHTFSVVVFPNVDQAFVAALVIIMDRIHED 275
            + TF+V V+P VD AF+ ALV+I+D I+++
Sbjct: 182 GRDTFTVTVYPGVDYAFIVALVVILDEINKE 212


>tr|A7QFJ2|A7QFJ2_VITVI Chromosome chr8 scaffold_88, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00037442001
           PE=4 SV=1
          Length = 216

 Score = 83.2 bits (204), Expect = 9e-15
 Identities = 37/92 (40%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
 Frame = +3

Query: 6   SSMVSFKTHLEIFLQGNENDDAPDFEVKGNFFQREAQIF--HKDQLIAEVKRKYIVGNVL 179
           SS++  KT L++FL  N  ++  DF++KG++F R   ++  + + +IA++ +K+ V +V+
Sbjct: 122 SSIIQLKTGLDVFLAANTKEEICDFKLKGSWFDRSCTVYAGNSNTIIAQMHKKHNVQSVV 181

Query: 180 LDKHTFSVVVFPNVDQAFVAALVIIMDRIHED 275
           L K TF+V V+PNVD AF+ AL++I+D I++D
Sbjct: 182 LGKDTFAVTVYPNVDYAFIVALIVILDEINDD 213


>tr|A9NZT7|A9NZT7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 222

 Score = 82.0 bits (201), Expect = 2e-14
 Identities = 39/91 (42%), Positives = 62/91 (68%)
 Frame = +3

Query: 3   KSSMVSFKTHLEIFLQGNENDDAPDFEVKGNFFQREAQIFHKDQLIAEVKRKYIVGNVLL 182
           KS++   +T L ++L  N + D   F+VKG+FF+R   I+    +IAE++RKY V  VL+
Sbjct: 125 KSTLFQLRTSLNVYLGNNCHSD---FKVKGSFFERSCTIYQGRTVIAEMRRKYTVSQVLM 181

Query: 183 DKHTFSVVVFPNVDQAFVAALVIIMDRIHED 275
            + TF+V V+P VD AF+ ALV+I+D I+++
Sbjct: 182 GRDTFTVTVYPGVDYAFIVALVVILDEINKE 212


>tr|A2YJM7|A2YJM7_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_25434 PE=4 SV=1
          Length = 201

 Score = 80.5 bits (197), Expect = 6e-14
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
 Frame = +3

Query: 3   KSSMVSF-KTHLEIFLQGNENDDAPDFEVKGNFFQREAQIF--HKDQLIAEVKRKYIVGN 173
           KSSM+   KT ++IFL GN  +   DF++KG++F R +  +    + +IA++ RK+   +
Sbjct: 105 KSSMLQLMKTEMDIFLAGNTAEQVCDFKIKGSYFDRSSAFYLGKSNTIIAQMNRKHTAAS 164

Query: 174 VLLDKHTFSVVVFPNVDQAFVAALVIIMDRIHED 275
           V+L +  FS+ VFP VD  F+AALV I+D +H D
Sbjct: 165 VVLGRDVFSITVFPQVDYVFIAALVAILDDVHRD 198


>tr|A9T2I3|A9T2I3_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_167699 PE=4 SV=1
          Length = 252

 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
 Frame = +3

Query: 3   KSSMVSFKTHLEIFLQGNENDD-APDFEVKGNFFQREAQIFHKDQLIAEVKRKYIVGNVL 179
           KSS+V FKT +++ L  +      PD++VKG+FF R   +F   +  A V R+     V+
Sbjct: 154 KSSVVQFKTSMDVMLASSTTGKHTPDYQVKGDFFDRNLTVFRGAEQAALVTRQITFTTVI 213

Query: 180 LDKHTFSVVVFPNVDQAFVAALVIIMDRI 266
           LDK TF V +FP VDQA V AL++IMD +
Sbjct: 214 LDKDTFGVTIFPGVDQALVLALIVIMDEV 242


>tr|A7QFJ1|A7QFJ1_VITVI Chromosome chr8 scaffold_88, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00037441001
           PE=4 SV=1
          Length = 213

 Score = 78.2 bits (191), Expect = 3e-13
 Identities = 35/92 (38%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
 Frame = +3

Query: 6   SSMVSFKTHLEIFLQGNENDDAPDFEVKGNFFQREAQIF--HKDQLIAEVKRKYIVGNVL 179
           SS++  KT L +FL  N  ++  DF+++G++F R   ++  + + +IA++ +KY V +V+
Sbjct: 122 SSIIQLKTALNVFLAANTKEEVCDFKLRGSWFDRSCTVYAGNSNTIIAKMHKKYNVQSVV 181

Query: 180 LDKHTFSVVVFPNVDQAFVAALVIIMDRIHED 275
           L K TF+V V+ NVD AF+ AL++I++ I++D
Sbjct: 182 LGKDTFAVTVYTNVDYAFIVALIVILEEINKD 213


>tr|Q84YM9|Q84YM9_ORYSJ Os07g0230700 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0086N05.106 PE=2 SV=1
          Length = 214

 Score = 77.4 bits (189), Expect = 5e-13
 Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
 Frame = +3

Query: 3   KSSMVSF-KTHLEIFLQGNENDDAPDFEVKGNFFQREAQIF--HKDQLIAEVKRKYIVGN 173
           KSSM+   KT ++IFL GN  +   DF++KG++  R +  +    + +IA++ RK+   +
Sbjct: 118 KSSMLQLMKTEMDIFLAGNTAEQVCDFKIKGSYCDRSSAFYLGKSNTIIAQMNRKHTAAS 177

Query: 174 VLLDKHTFSVVVFPNVDQAFVAALVIIMDRIHED 275
           V+L +  FS+ VFP VD  F+AALV I+D +H D
Sbjct: 178 VVLGRDVFSITVFPQVDYVFIAALVAILDDVHRD 211


>tr|A3BI01|A3BI01_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_022673 PE=4 SV=1
          Length = 201

 Score = 77.4 bits (189), Expect = 5e-13
 Identities = 38/94 (40%), Positives = 60/94 (63%), Gaps = 3/94 (3%)
 Frame = +3

Query: 3   KSSMVSF-KTHLEIFLQGNENDDAPDFEVKGNFFQREAQIF--HKDQLIAEVKRKYIVGN 173
           KSSM+   KT ++IFL GN  +   DF++KG++  R +  +    + +IA++ RK+   +
Sbjct: 105 KSSMLQLMKTEMDIFLAGNTAEQVCDFKIKGSYCDRSSAFYLGKSNTIIAQMNRKHTAAS 164

Query: 174 VLLDKHTFSVVVFPNVDQAFVAALVIIMDRIHED 275
           V+L +  FS+ VFP VD  F+AALV I+D +H D
Sbjct: 165 VVLGRDVFSITVFPQVDYVFIAALVAILDDVHRD 198