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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP914712
Clone id YMU001_000062_A10
Library
Length 339
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000062_A10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GTACTCAGGAGCTGCAGGCCAACAAGAAGGAGCTGGCCCAGCTGAAGTGGAATTTCCCAA
ATTGAACCCCCCACCCTATAAAAGTCAAAAAATGATCAAATTAGGGGCTTATTTTTTGCA
TTGTGGAGCCCGTTGGAAACCTGCAAAGTGGAGCTTTTGGATAGAGGGGTGTGCCTATCC
ATCCCTTTGCATTTTTCTTGTGTAAATGGCCATGGGGATGGCAGTGTGAGTTTGTACAGG
TGTTTTAGGTCAGTGCTGTGGTTTCCCCTTCCCCCCTTCTCTTTCTCCTGCTTTCATGGT
TCTCCTCGGTGCCGGCTGTGTGGAACTGTGTGCCCCCCC
■■Homology search results ■■ -
sp_hit_id P30673
Definition sp|P30673|GH_MCMVS Glycoprotein H OS=Murine cytomegalovirus (strain Smith)
Align length 51
Score (bit) 32.0
E-value 0.99
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914712|Adiantum capillus-veneris mRNA, clone:
YMU001_000062_A10.
         (339 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P30673|GH_MCMVS Glycoprotein H OS=Murine cytomegalovirus (str...    32   0.99 
sp|B2RXR6|ANR44_MOUSE Serine/threonine-protein phosphatase 6 reg...    31   1.7  
sp|Q8IN94|OSA_DROME Trithorax group protein osa OS=Drosophila me...    30   2.9  
sp|Q4AAW8|RS2_MYCHJ 30S ribosomal protein S2 OS=Mycoplasma hyopn...    30   4.9  
sp|Q4A8V7|RS2_MYCH7 30S ribosomal protein S2 OS=Mycoplasma hyopn...    30   4.9  
sp|Q601Z3|RS2_MYCH2 30S ribosomal protein S2 OS=Mycoplasma hyopn...    30   4.9  
sp|P22021|B7_USTMA Mating-type locus allele B7 protein OS=Ustila...    30   4.9  
sp|Q9R1R4|TDRD7_RAT Tudor domain-containing protein 7 OS=Rattus ...    29   6.4  
sp|Q7MAX5|CAPP_PHOLL Phosphoenolpyruvate carboxylase OS=Photorha...    29   6.4  
sp|P21405|POLR_SBMV Putative polyprotein OS=Southern bean mosaic...    29   6.4  

>sp|P30673|GH_MCMVS Glycoprotein H OS=Murine cytomegalovirus (strain
           Smith) GN=GH PE=3 SV=2
          Length = 725

 Score = 32.0 bits (71), Expect = 0.99
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
 Frame = -2

Query: 248 LKHLYKLTLPSPWPFTQEKCKGMDRHTPLSKSSTLQV-------SNGLHNA 117
           ++H +K T P+P P  Q + +  ++H P   S+ + V       S+G+H A
Sbjct: 346 IRHCFKTTTPNPTPAFQTRMQLTEKHKPAHSSNAIDVRVLAATYSSGMHAA 396


>sp|B2RXR6|ANR44_MOUSE Serine/threonine-protein phosphatase 6
           regulatory ankyrin repeat subunit B OS=Mus musculus
           GN=Ankrd44 PE=2 SV=1
          Length = 993

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 9/76 (11%)
 Frame = +1

Query: 136 ETCKVELLDRGVCLS-----IPLHFSCVNGHGDGSVSL--YRCFRSVLWFPLPPFSFSCF 294
           E  ++ L +   CL       PLH++C NG+ +    L   +CFR  +  P  P   +  
Sbjct: 754 ELLQIALSEEDCCLKDNQGYTPLHWACYNGNENCIEVLLEQKCFRKFIGNPFTPLHCAII 813

Query: 295 HGSPRCR--LCGTVCP 336
           +G   C   L G + P
Sbjct: 814 NGHESCASLLLGAIDP 829


>sp|Q8IN94|OSA_DROME Trithorax group protein osa OS=Drosophila
            melanogaster GN=osa PE=1 SV=1
          Length = 2716

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 21/67 (31%), Positives = 24/67 (35%), Gaps = 7/67 (10%)
 Frame = -1

Query: 339  GGAHSSTQPAPRRTMKAGEREGGKGK-------PQH*PKTPVQTHTAIPMAIYTRKMQRD 181
            GG  S T P P +    G   GG G        PQ  P  P   HTA   A    + Q  
Sbjct: 1223 GGPGSGTGPGPGQGPGPGAASGGAGAVGAVGGGPQPHPPPPHSPHTAAQQAAGQHQQQHP 1282

Query: 180  G*AHPSI 160
               HP +
Sbjct: 1283 QHQHPGL 1289


>sp|Q4AAW8|RS2_MYCHJ 30S ribosomal protein S2 OS=Mycoplasma
           hyopneumoniae (strain J / ATCC 25934 / NCTC 10110)
           GN=rpsB PE=3 SV=2
          Length = 318

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +2

Query: 50  EFPKLNP---PPYKSQKMIKLGAYFLHCGARWKPAKWSFWIE 166
           E P  NP   P    QK+++ G YF H  ++W P    F ++
Sbjct: 24  EIPAENPTETPIISKQKLLEAGVYFGHKASQWHPKMAQFLLK 65


>sp|Q4A8V7|RS2_MYCH7 30S ribosomal protein S2 OS=Mycoplasma
           hyopneumoniae (strain 7448) GN=rpsB PE=3 SV=2
          Length = 318

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +2

Query: 50  EFPKLNP---PPYKSQKMIKLGAYFLHCGARWKPAKWSFWIE 166
           E P  NP   P    QK+++ G YF H  ++W P    F ++
Sbjct: 24  EIPAENPTETPIISKQKLLEAGVYFGHKASQWHPKMAQFLLK 65


>sp|Q601Z3|RS2_MYCH2 30S ribosomal protein S2 OS=Mycoplasma
           hyopneumoniae (strain 232) GN=rpsB PE=3 SV=1
          Length = 318

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
 Frame = +2

Query: 50  EFPKLNP---PPYKSQKMIKLGAYFLHCGARWKPAKWSFWIE 166
           E P  NP   P    QK+++ G YF H  ++W P    F ++
Sbjct: 24  EIPAENPTETPIISKQKLLEAGVYFGHKASQWHPKMAQFLLK 65


>sp|P22021|B7_USTMA Mating-type locus allele B7 protein OS=Ustilago
           maydis PE=3 SV=1
          Length = 410

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 23/48 (47%), Positives = 30/48 (62%)
 Frame = -2

Query: 245 KHLYKLTLPSPWPFTQEKCKGMDRHTPLSKSSTLQVSNGLHNAKNKPL 102
           KH + LTL SP+P TQE+ +G+ R   L+  ST +V  GL NA   PL
Sbjct: 124 KH-FLLTLDSPYP-TQEEKEGLVR---LTNESTARV--GLSNATRPPL 164


>sp|Q9R1R4|TDRD7_RAT Tudor domain-containing protein 7 OS=Rattus
           norvegicus GN=Tdrd7 PE=1 SV=1
          Length = 1113

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
 Frame = -1

Query: 324 STQPAPRRTMKAGEREGGKGK---PQH*PKTPVQTHTAIPMAIYTRKMQRDG*AHPSIQK 154
           S +P P    + G   G K     P + P  PVQ H ++        ++    +HP   K
Sbjct: 135 SKKPNPTLLREKGSTLGAKADVDMPPY-PDAPVQRHVSMSANSSVTVLR----SHPEASK 189

Query: 153 LHFAGFQRAPQC 118
           L F G+   P C
Sbjct: 190 LQFMGYSPKPHC 201


>sp|Q7MAX5|CAPP_PHOLL Phosphoenolpyruvate carboxylase
           OS=Photorhabdus luminescens subsp. laumondii GN=ppc PE=3
           SV=1
          Length = 878

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +1

Query: 58  QIEPPTL*KSKNDQIRGLFFALWSPLETCKVELLDRGVCLSIPLHFSC 201
           Q+ PPT     N+Q+    +A +  L+TC +E++  G  L I     C
Sbjct: 337 QVLPPTDLLVDNEQLWQPLYACYQSLKTCGMEIIANGQLLDILRRIRC 384


>sp|P21405|POLR_SBMV Putative polyprotein OS=Southern bean mosaic
           virus GN=ORF2 PE=4 SV=1
          Length = 956

 Score = 29.3 bits (64), Expect = 6.4
 Identities = 23/69 (33%), Positives = 31/69 (44%)
 Frame = -3

Query: 334 GTQFHTAGTEENHESRRKRRGEGETTALT*NTCTNSHCHPHGHLHKKNAKGWIGTPLYPK 155
           GT   T G ++   S++   G G+  AL  N    +H  P        AKGW GTPLY +
Sbjct: 243 GTAVQTFGGQD---SKQLFSGLGKAKALD-NAWEFTHTAP-------TAKGWSGTPLYTR 291

Query: 154 APLCRFPTG 128
             +    TG
Sbjct: 292 DGIVGMHTG 300
tr_hit_id B3N6N7
Definition tr|B3N6N7|B3N6N7_DROER GG10496 OS=Drosophila erecta
Align length 55
Score (bit) 35.4
E-value 1.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP914712|Adiantum capillus-veneris mRNA, clone:
YMU001_000062_A10.
         (339 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3N6N7|B3N6N7_DROER GG10496 OS=Drosophila erecta GN=GG10496 P...    35   1.4  
tr|Q8IKJ8|Q8IKJ8_PLAF7 Putative uncharacterized protein OS=Plasm...    33   5.5  
tr|B4J2U8|B4J2U8_DROGR GH16057 OS=Drosophila grimshawi GN=GH1605...    33   9.3  
tr|A2QRS8|A2QRS8_ASPNC Contig An08c0160, complete genome. OS=Asp...    33   9.3  

>tr|B3N6N7|B3N6N7_DROER GG10496 OS=Drosophila erecta GN=GG10496 PE=4
           SV=1
          Length = 861

 Score = 35.4 bits (80), Expect = 1.4
 Identities = 18/55 (32%), Positives = 25/55 (45%)
 Frame = -2

Query: 266 GNHSTDLKHLYKLTLPSPWPFTQEKCKGMDRHTPLSKSSTLQVSNGLHNAKNKPL 102
           G HS  L  LY + L S      EKC   +  TP+ + +T Q+       KN P+
Sbjct: 617 GEHSKSLDELYNMQLHSYEHREIEKCFEQEEETPIQQETTAQIEQEYEKYKNTPV 671


>tr|Q8IKJ8|Q8IKJ8_PLAF7 Putative uncharacterized protein
           OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0607 PE=4
           SV=1
          Length = 1068

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 17/54 (31%), Positives = 25/54 (46%)
 Frame = -3

Query: 298 HESRRKRRGEGETTALT*NTCTNSHCHPHGHLHKKNAKGWIGTPLYPKAPLCRF 137
           HE  R+  G+ E      N   N H + H H+H+ N+K + G P   + P   F
Sbjct: 185 HEHEREHEGKNEGKNEHKNEHKNEHKNEHVHVHEHNSKNYEGNPPKNEYPNINF 238


>tr|B4J2U8|B4J2U8_DROGR GH16057 OS=Drosophila grimshawi GN=GH16057
           PE=4 SV=1
          Length = 669

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -3

Query: 319 TAGTEENHESRRKRRGEGETTALT*NTCTNSHCHPHGHLH-KKNAKG 182
           T    + H+++ KR  E  TT     T  + H HPH HLH   NA G
Sbjct: 392 TRQRRKRHDNKLKRSTEATTTT----TALHPHSHPHPHLHPHPNANG 434


>tr|A2QRS8|A2QRS8_ASPNC Contig An08c0160, complete genome.
           OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
           GN=An08g07090 PE=3 SV=1
          Length = 512

 Score = 32.7 bits (73), Expect = 9.3
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = -3

Query: 226 HCHPHGHLHKKNAKGWIGTPLYPKAPLCRFPTGSTMQKISP 104
           H H HGH H+ +    + +P+  K+  C+FP+G+ +  I+P
Sbjct: 21  HAHDHGH-HRSHRS--VDSPVVKKSSSCQFPSGAGLIPITP 58