BP914736 |
Clone id |
YMU001_000062_C12 |
Library |
YMU01 |
Length |
517 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000062_C12. |
Accession |
BP914736 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTGTCATTCAGAATGATCCTGTGGTTGCCCCGTCTCTAACTTCCTCGAAAGACGAGTTTC CACGTAAACCTGTACCGAGTCCAAATTGCAAGCCCCTGGATCCAGTGAGCATGAAAAATG GAACCATATCTCAGAAGGATAGAAAAAAAGAGCACAGATTGAACGAGAAGCTTTGGGAAG GCAGTTTTCAATTATCTGGCTCTCAGATATCTCCTGTGGTAGCTCTTTTTAAAAGTGGAG ATGGAGTGGAGCTGAACTGCTGGCCAAAGCTAATTGAGATCAAGGGAAGAGTGAGGCTAG ATGCTTTAGAAAAGTTCTTACAAGAACTTCGGATGTCTCGAACTCGAGCAGTCATGGTAA TTGCATGTCGTGTTGATGAAGGAGAAGGGGAACGAGGAGCTGCAGTGAATGCTCTGAAGG AGGCTGCTAATCAATATCAGCGAGGAGAGCGAGTAGGGTATGCAGAACCAGTTCCAGGCT ATGAGCTTTACCTCTTCCCAGGAGGGGAACGGCTCTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q90WY5 |
Definition |
sp|Q90WY5|ADA2B_DANRE Alpha-2B adrenergic receptor OS=Danio rerio |
Align length |
92 |
Score (bit) |
32.3 |
E-value |
1.3 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7P5H0 |
Definition |
tr|A7P5H0|A7P5H0_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera |
Align length |
132 |
Score (bit) |
113.0 |
E-value |
5.0e-24 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP914736|Adiantum capillus-veneris mRNA, clone: YMU001_000062_C12. (517 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7P5H0|A7P5H0_VITVI Chromosome chr4 scaffold_6, whole genome ... 113 5e-24 tr|A5AN42|A5AN42_VITVI Putative uncharacterized protein OS=Vitis... 113 5e-24 tr|Q9LYE6|Q9LYE6_ARATH Putative uncharacterized protein F15N18_2... 105 1e-21 tr|Q682K2|Q682K2_ARATH Putative transcription elongation factor ... 104 3e-21 tr|Q3E7G3|Q3E7G3_ARATH Uncharacterized protein At5g25520.2 OS=Ar... 101 2e-20 tr|Q0DB75|Q0DB75_ORYSJ Os06g0595900 protein (Fragment) OS=Oryza ... 95 2e-18 tr|A3BD94|A3BD94_ORYSJ Putative uncharacterized protein OS=Oryza... 95 2e-18 tr|Q6H8E1|Q6H8E1_ORYSJ PHD finger protein-like OS=Oryza sativa s... 94 3e-18 tr|Q0E2W4|Q0E2W4_ORYSJ Os02g0208600 protein (Fragment) OS=Oryza ... 94 3e-18 tr|B8ADW3|B8ADW3_ORYSI Putative uncharacterized protein OS=Oryza... 94 3e-18 tr|A3A4E1|A3A4E1_ORYSJ Putative uncharacterized protein OS=Oryza... 94 3e-18 tr|B8B4E3|B8B4E3_ORYSI Putative uncharacterized protein OS=Oryza... 93 9e-18 tr|Q7XTM7|Q7XTM7_ORYSJ OSJNBa0033G05.18 protein (Putative unchar... 89 1e-16 tr|Q9SL99|Q9SL99_ARATH Putative transcription elongation factor ... 78 3e-13 tr|Q25A85|Q25A85_ORYSA H0413E07.9 protein OS=Oryza sativa GN=H04... 75 1e-12 tr|B8AV86|B8AV86_ORYSI Putative uncharacterized protein OS=Oryza... 74 4e-12 tr|Q8GYX6|Q8GYX6_ARATH Putative PHD finger protein OS=Arabidopsi... 72 1e-11 tr|A7PF98|A7PF98_VITVI Chromosome chr11 scaffold_13, whole genom... 70 8e-11 tr|A8MS19|A8MS19_ARATH Uncharacterized protein At3g29639.1 OS=Ar... 65 3e-09 tr|A5BLR8|A5BLR8_VITVI Putative uncharacterized protein OS=Vitis... 64 6e-09 tr|A9TG78|A9TG78_PHYPA Predicted protein OS=Physcomitrella paten... 63 1e-08 tr|A4S0A7|A4S0A7_OSTLU Predicted protein OS=Ostreococcus lucimar... 55 2e-06 tr|Q015A4|Q015A4_OSTTA Chromosome 07 contig 1, DNA sequence. (Fr... 45 0.002 tr|A8P4U0|A8P4U0_COPC7 Predicted protein OS=Coprinopsis cinerea ... 36 1.3 tr|A7SBB5|A7SBB5_NEMVE Predicted protein (Fragment) OS=Nematoste... 35 2.2 tr|A5BLR5|A5BLR5_VITVI Putative uncharacterized protein OS=Vitis... 35 2.9 tr|Q1E4I3|Q1E4I3_COCIM Predicted protein OS=Coccidioides immitis... 34 3.7 tr|Q99Y59|Q99Y59_STRP1 Putative transcriptional regulatory prote... 34 4.9 tr|Q7CMT9|Q7CMT9_STRP8 Putative transcriptional regulatory prote... 34 4.9 tr|Q7CES5|Q7CES5_STRP3 Putative transcriptional regulatory prote... 34 4.9
>tr|A7P5H0|A7P5H0_VITVI Chromosome chr4 scaffold_6, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00032530001 PE=4 SV=1 Length = 1094
Score = 113 bits (283), Expect = 5e-24 Identities = 65/132 (49%), Positives = 80/132 (60%) Frame = +3
Query: 105 VSMKNGTISQKDRKKEHRLNEKLWEGSFQLSGSQISPVVALFKSGDGVELNCWPKLIEIK 284 V M++ + D+KK + +WEG QL+ S ++ VV FKSG+ WP +EIK Sbjct: 654 VHMQSESAPHVDQKK----GDYVWEGLLQLNVSSMATVVCFFKSGEKASTKEWPGFLEIK 709
Query: 285 GRVRLDALEKFLQELRMSRTRAVMVIACRVDEGEGERGAAVNALKEAANQYQRGERVGYA 464 GRVRLDA EKFLQEL MSR+RA MV+ EG E G A L E A+ Y ERVG+A Sbjct: 710 GRVRLDAFEKFLQELPMSRSRATMVVRFAWKEGSSEDGRA--NLCEVADSYVLDERVGFA 767
Query: 465 EPVPGYELYLFP 500 EP PG ELY P Sbjct: 768 EPAPGMELYFCP 779
>tr|A5AN42|A5AN42_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043189 PE=4 SV=1 Length = 1059
Score = 113 bits (283), Expect = 5e-24 Identities = 65/132 (49%), Positives = 80/132 (60%) Frame = +3
Query: 105 VSMKNGTISQKDRKKEHRLNEKLWEGSFQLSGSQISPVVALFKSGDGVELNCWPKLIEIK 284 V M++ + D+KK + +WEG QL+ S ++ VV FKSG+ WP +EIK Sbjct: 606 VHMQSESAPHVDQKK----GDYVWEGLLQLNVSSMATVVCFFKSGEKASTKEWPGFLEIK 661
Query: 285 GRVRLDALEKFLQELRMSRTRAVMVIACRVDEGEGERGAAVNALKEAANQYQRGERVGYA 464 GRVRLDA EKFLQEL MSR+RA MV+ EG E G A L E A+ Y ERVG+A Sbjct: 662 GRVRLDAFEKFLQELPMSRSRATMVVRFAWKEGSSEDGRA--NLCEVADSYVLDERVGFA 719
Query: 465 EPVPGYELYLFP 500 EP PG ELY P Sbjct: 720 EPAPGMELYFCP 731
>tr|Q9LYE6|Q9LYE6_ARATH Putative uncharacterized protein F15N18_20 OS=Arabidopsis thaliana GN=F15N18_20 PE=4 SV=1 Length = 871
Score = 105 bits (263), Expect = 1e-21 Identities = 65/160 (40%), Positives = 87/160 (54%), Gaps = 4/160 (2%) Frame = +3
Query: 33 SLTSSKDEFPRKPVPS--PNCKPLDPVSMKNGTISQKDRKKEHRLNEKLWEGSFQLSGSQ 206 SL +K E + P N K D +S + D K E+ W+G QLS S Sbjct: 498 SLPEAKPEKIDEVTPEFDANVKVDDDISRVEKAAALSDDK-----GERAWDGILQLSMSS 552
Query: 207 ISPVVALFKSGDGVELNCWPKLIEIKGRVRLDALEKFLQELRMSRTRAVMVIACRVDEG- 383 + PV +FKSG+ E + WP ++E+KGRVRL KF+QEL SRTRA+MV+ +G Sbjct: 553 VVPVAGIFKSGEKAETSEWPAMVEVKGRVRLSGFGKFIQELPKSRTRALMVMYLAYKDGI 612
Query: 384 -EGERGAAVNALKEAANQYQRGERVGYAEPVPGYELYLFP 500 E +RG+ + E + Y +RVGYAEP G ELYL P Sbjct: 613 SESQRGSLI----EVIDSYVADQRVGYAEPASGVELYLCP 648
>tr|Q682K2|Q682K2_ARATH Putative transcription elongation factor S-II OS=Arabidopsis thaliana GN=At2g25640 PE=2 SV=1 Length = 745
Score = 104 bits (259), Expect = 3e-21 Identities = 57/112 (50%), Positives = 73/112 (65%) Frame = +3
Query: 165 EKLWEGSFQLSGSQISPVVALFKSGDGVELNCWPKLIEIKGRVRLDALEKFLQELRMSRT 344 E+LWEG QLS S +S V+ + +SG+ WP L+EIKGRVRLDA EKF++EL SR+ Sbjct: 596 ERLWEGVLQLSPSTVSSVIGILRSGERTTTKEWPILLEIKGRVRLDAFEKFVRELPNSRS 655
Query: 345 RAVMVIACRVDEGEGERGAAVNALKEAANQYQRGERVGYAEPVPGYELYLFP 500 RAVMV+ C V + E + N + E + Y + RVGYAEP G ELYL P Sbjct: 656 RAVMVM-CFVCKEECSKAEQEN-ISEVVDSYAKDGRVGYAEPASGVELYLCP 705
>tr|Q3E7G3|Q3E7G3_ARATH Uncharacterized protein At5g25520.2 OS=Arabidopsis thaliana GN=At5g25520 PE=4 SV=1 Length = 997
Score = 101 bits (252), Expect = 2e-20 Identities = 60/157 (38%), Positives = 91/157 (57%), Gaps = 4/157 (2%) Frame = +3
Query: 42 SSKDEFPRKPVPSPNCKPLDPVSMKNGTISQKDRKK--EHRLNEKLWEGSFQLSGSQISP 215 SSK E + V SP KP D +G +S+ + + +++W+G QLS + + Sbjct: 613 SSKTELEKTNVISP--KP-DAGDQLDGDVSKPENTSLVDSIKEDRIWDGILQLSSASVVS 669
Query: 216 VVALFKSGDGVELNCWPKLIEIKGRVRLDALEKFLQELRMSRTRAVMV--IACRVDEGEG 389 V +FKSG+ + + WP ++E+KGRVRL A KF++EL +SR+R +MV + C+ + Sbjct: 670 VTGIFKSGEKAKTSEWPTMVEVKGRVRLSAFGKFVKELPLSRSRVLMVMNVVCKNGISQS 729
Query: 390 ERGAAVNALKEAANQYQRGERVGYAEPVPGYELYLFP 500 +R ++L E A Y +RVGYAEP G ELYL P Sbjct: 730 QR----DSLIEVAKSYVADQRVGYAEPTSGVELYLCP 762
>tr|Q0DB75|Q0DB75_ORYSJ Os06g0595900 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os06g0595900 PE=4 SV=1 Length = 630
Score = 94.7 bits (234), Expect = 2e-18 Identities = 51/113 (45%), Positives = 69/113 (61%) Frame = +3
Query: 162 NEKLWEGSFQLSGSQISPVVALFKSGDGVELNCWPKLIEIKGRVRLDALEKFLQELRMSR 341 ++ +WEG+ QLS S ++ VVA+FKSG+ N W ++IKGRVRL A ++FL++L SR Sbjct: 407 HDSVWEGTIQLSLSSLTNVVAIFKSGEKTSTNEWRHFLDIKGRVRLSAFQEFLEQLPKSR 466
Query: 342 TRAVMVIACRVDEGEGERGAAVNALKEAANQYQRGERVGYAEPVPGYELYLFP 500 +RA+MV R EG E G L + Y ERVG +P G ELYL P Sbjct: 467 SRAIMVTELRWKEGSLESGR--QHLLRTIDSYIADERVGLVKPADGVELYLCP 517
>tr|A3BD94|A3BD94_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_021016 PE=4 SV=1 Length = 1136
Score = 94.7 bits (234), Expect = 2e-18 Identities = 51/113 (45%), Positives = 69/113 (61%) Frame = +3
Query: 162 NEKLWEGSFQLSGSQISPVVALFKSGDGVELNCWPKLIEIKGRVRLDALEKFLQELRMSR 341 ++ +WEG+ QLS S ++ VVA+FKSG+ N W ++IKGRVRL A ++FL++L SR Sbjct: 650 HDSVWEGTIQLSLSSLTNVVAIFKSGEKTSTNEWRHFLDIKGRVRLSAFQEFLEQLPKSR 709
Query: 342 TRAVMVIACRVDEGEGERGAAVNALKEAANQYQRGERVGYAEPVPGYELYLFP 500 +RA+MV R EG E G L + Y ERVG +P G ELYL P Sbjct: 710 SRAIMVTELRWKEGSLESGR--QHLLRTIDSYIADERVGLVKPADGVELYLCP 760
>tr|Q6H8E1|Q6H8E1_ORYSJ PHD finger protein-like OS=Oryza sativa subsp. japonica GN=OJ1006_A02.15 PE=4 SV=1 Length = 1119
Score = 94.4 bits (233), Expect = 3e-18 Identities = 50/114 (43%), Positives = 70/114 (61%) Frame = +3
Query: 159 LNEKLWEGSFQLSGSQISPVVALFKSGDGVELNCWPKLIEIKGRVRLDALEKFLQELRMS 338 + E +WEG+ QL+ S ++ VVA+FKSG+ + W +EIKGRV+L A ++F+++L S Sbjct: 679 IRESIWEGAIQLTMSSLTNVVAIFKSGEKPPVKEWRSFVEIKGRVKLSAFQEFVEQLPKS 738
Query: 339 RTRAVMVIACRVDEGEGERGAAVNALKEAANQYQRGERVGYAEPVPGYELYLFP 500 R+RA+MV EG E G L + + Y ERVG AEP G ELYL P Sbjct: 739 RSRAIMVTELCWKEGSHESGR--QHLLQTIDSYISDERVGLAEPADGIELYLCP 790
>tr|Q0E2W4|Q0E2W4_ORYSJ Os02g0208600 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os02g0208600 PE=4 SV=1 Length = 913
Score = 94.4 bits (233), Expect = 3e-18 Identities = 50/114 (43%), Positives = 70/114 (61%) Frame = +3
Query: 159 LNEKLWEGSFQLSGSQISPVVALFKSGDGVELNCWPKLIEIKGRVRLDALEKFLQELRMS 338 + E +WEG+ QL+ S ++ VVA+FKSG+ + W +EIKGRV+L A ++F+++L S Sbjct: 679 IRESIWEGAIQLTMSSLTNVVAIFKSGEKPPVKEWRSFVEIKGRVKLSAFQEFVEQLPKS 738
Query: 339 RTRAVMVIACRVDEGEGERGAAVNALKEAANQYQRGERVGYAEPVPGYELYLFP 500 R+RA+MV EG E G L + + Y ERVG AEP G ELYL P Sbjct: 739 RSRAIMVTELCWKEGSHESGR--QHLLQTIDSYISDERVGLAEPADGIELYLCP 790
>tr|B8ADW3|B8ADW3_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06323 PE=4 SV=1 Length = 907
Score = 94.4 bits (233), Expect = 3e-18 Identities = 50/114 (43%), Positives = 70/114 (61%) Frame = +3
Query: 159 LNEKLWEGSFQLSGSQISPVVALFKSGDGVELNCWPKLIEIKGRVRLDALEKFLQELRMS 338 + E +WEG+ QL+ S ++ VVA+FKSG+ + W +EIKGRV+L A ++F+++L S Sbjct: 354 IRESIWEGAIQLTMSSLTNVVAIFKSGEKPPVKEWRSFVEIKGRVKLSAFQEFVEQLPKS 413
Query: 339 RTRAVMVIACRVDEGEGERGAAVNALKEAANQYQRGERVGYAEPVPGYELYLFP 500 R+RA+MV EG E G L + + Y ERVG AEP G ELYL P Sbjct: 414 RSRAIMVTELCWKEGSHESGR--QHLLQTIDSYISDERVGLAEPADGIELYLCP 465
|